Strain Fitness in Shewanella amazonensis SB2B around Sama_2065

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
2,501,102	+				+0.2
2,501,102	+				+1.7
2,501,147	+				-1.1
2,501,147	+				+1.0
2,501,147	+				+3.7
2,501,147	+				+1.1
2,501,147	+				+0.0
2,501,147	+				-0.0
2,501,147	+				+4.9
2,501,147	+				-2.0
2,501,147	+				-0.5
2,501,147	+				-1.0
2,501,148	-				-0.8
2,501,148	-				-2.6
2,501,148	-				-1.3
2,501,148	-				+2.0
2,501,148	-				-0.3
2,501,148	-				-0.9
2,501,148	-				-0.6
2,501,148	-				-1.8
2,501,148	-				-1.5
2,501,151	+				-1.8
2,501,151	+				+2.5
2,501,152	-				-0.3
2,501,402	-		Sama_2065	0.23	-0.5
2,501,529	+		Sama_2065	0.34	-0.0
2,501,529	+		Sama_2065	0.34	-1.5
2,501,529	+		Sama_2065	0.34	-1.0
2,501,529	+		Sama_2065	0.34	-1.5
2,501,529	+		Sama_2065	0.34	-1.5
2,501,529	+		Sama_2065	0.34	-1.9
2,501,530	-		Sama_2065	0.34	+3.3
2,501,530	-		Sama_2065	0.34	-0.8
2,501,530	-		Sama_2065	0.34	+3.6
2,501,592	+		Sama_2065	0.40	+1.9
2,501,592	+		Sama_2065	0.40	+2.0
2,501,593	-		Sama_2065	0.40	-0.7
2,501,682	+		Sama_2065	0.48	-1.3
2,501,682	+		Sama_2065	0.48	+3.0
2,501,682	+		Sama_2065	0.48	+2.6
2,501,682	+		Sama_2065	0.48	-1.9
2,501,683	-		Sama_2065	0.48	-1.3
2,501,683	-		Sama_2065	0.48	+0.2
2,501,683	-		Sama_2065	0.48	+0.3
2,501,683	-		Sama_2065	0.48	-1.0
2,501,683	-		Sama_2065	0.48	+0.2
2,501,683	-		Sama_2065	0.48	-0.0
2,501,683	-		Sama_2065	0.48	+3.5
2,501,684	+		Sama_2065	0.48	+2.5
2,501,748	+		Sama_2065	0.54	+1.8
2,501,912	+		Sama_2065	0.68	-0.4
2,501,953	+		Sama_2065	0.72	-0.2
2,502,062	+		Sama_2065	0.82	+0.9
2,502,063	-		Sama_2065	0.82	+0.9
2,502,244	-				+0.0
2,502,249	+				+3.7
2,502,249	+				+2.2
2,502,268	+				-1.4
2,502,268	+				+1.5
2,502,307	+				+2.5
2,502,322	+				-0.5
2,502,323	-				+1.8
2,502,339	-				-0.3
2,502,385	+				-0.3
2,502,393	-				-1.8
2,502,393	-				-0.3
2,502,454	-		Sama_2066	0.14	-0.1
2,502,517	-		Sama_2066	0.28	+1.5
2,502,568	+		Sama_2066	0.40	+1.3
2,502,585	-		Sama_2066	0.44	-1.4
2,502,585	-		Sama_2066	0.44	-0.8
2,502,618	-		Sama_2066	0.51	+3.0
2,502,618	-		Sama_2066	0.51	+2.3
2,502,665	+		Sama_2066	0.62	+0.4
2,502,666	-		Sama_2066	0.62	-0.9
2,502,666	-		Sama_2066	0.62	-1.3
2,502,698	-		Sama_2066	0.69	-0.8
2,502,698	-		Sama_2066	0.69	+0.7
2,502,698	-		Sama_2066	0.69	-2.2
2,502,698	-		Sama_2066	0.69	+0.5
2,502,710	-		Sama_2066	0.72	-1.8
2,502,846	-				-1.4
2,502,857	-				+1.0
2,502,859	-				-1.5
2,502,888	+				-0.5
2,502,888	+				+1.3
2,502,973	+				-1.6
2,502,974	-				-0.5
2,503,006	+				-2.0
2,503,030	+				-1.4
2,503,031	-				+3.5
2,503,031	-				+1.0
2,503,032	+				+0.2
2,503,033	-				+3.5
2,503,095	+				-0.6
2,503,095	+				+0.3
2,503,107	+				+5.7
2,503,107	+				-1.5
2,503,107	+				-0.0
2,503,107	+				+4.7
2,503,107	+				+1.5
2,503,108	-				+0.5
2,503,113	-				+2.6
2,503,171	+				+1.1
2,503,219	+		Sama_2067	0.13	-1.1
2,503,260	+		Sama_2067	0.17	-1.3
2,503,260	+		Sama_2067	0.17	-0.1