Strain Fitness in Shewanella amazonensis SB2B around Sama_1938

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
2,364,343	-		Sama_1936	0.72	-1.3
2,364,344	+		Sama_1936	0.72	+0.8
2,364,345	-		Sama_1936	0.72	-0.7
2,364,392	-		Sama_1936	0.78	-0.5
2,364,392	-		Sama_1936	0.78	-0.0
2,364,428	+		Sama_1936	0.82	-1.6
2,364,429	-		Sama_1936	0.82	-0.0
2,364,457	-		Sama_1936	0.86	-2.8
2,364,527	-				+1.8
2,364,527	-				-1.3
2,364,572	+				+0.5
2,364,582	+				+1.5
2,364,583	-				-1.4
2,364,588	-				+0.2
2,364,590	+				+2.2
2,364,590	+				+0.5
2,364,593	+				-1.0
2,364,594	-				-0.2
2,364,604	-				-0.8
2,364,609	-				+2.1
2,364,801	-		Sama_1937	0.23	-1.0
2,364,801	-		Sama_1937	0.23	+1.4
2,364,810	+		Sama_1937	0.24	+4.7
2,364,810	+		Sama_1937	0.24	-1.0
2,364,814	-		Sama_1937	0.24	+1.5
2,364,832	+		Sama_1937	0.27	+0.5
2,364,851	-		Sama_1937	0.30	-0.8
2,364,902	-		Sama_1937	0.37	+0.4
2,365,027	-		Sama_1937	0.54	+0.7
2,365,147	+		Sama_1937	0.71	+1.7
2,365,148	-		Sama_1937	0.71	-1.0
2,365,239	+		Sama_1937	0.84	-1.5
2,365,239	+		Sama_1937	0.84	-1.4
2,365,239	+		Sama_1937	0.84	-1.8
2,365,239	+		Sama_1937	0.84	-1.5
2,365,242	-		Sama_1937	0.85	-0.8
2,365,249	-		Sama_1937	0.86	-2.4
2,365,249	-		Sama_1937	0.86	-0.6
2,365,279	+		Sama_1937	0.90	+0.8
2,365,280	-				-1.0
2,365,304	-				+0.2
2,365,304	-				-0.8
2,365,324	+				+0.5
2,365,350	+				-0.8
2,365,358	+				+1.5
2,365,358	+				-1.0
2,365,359	-				-0.0
2,365,359	-				+4.7
2,365,414	-		Sama_1938	0.24	+4.8
2,365,453	-		Sama_1938	0.37	-1.9
2,365,457	-		Sama_1938	0.39	-2.8
2,365,589	+		Sama_1938	0.84	-0.8
2,365,690	-				-1.6
2,366,383	-				-0.8
2,366,419	-				-0.6
2,366,419	-				-3.2
2,366,419	-				-1.9
2,366,492	-				-0.0
2,366,572	-				-3.3
2,366,636	-				-1.9