Strain Fitness in Shewanella amazonensis SB2B around Sama_1937

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
2,363,691	+				-0.0
2,363,692	-				-1.3
2,363,692	-				-0.8
2,363,692	-				-1.0
2,363,692	-				+0.1
2,363,714	+				-0.8
2,363,715	-				+2.8
2,363,715	-				+1.9
2,363,725	-				-1.1
2,363,772	+				-0.9
2,363,773	-				-0.5
2,363,773	-				-0.5
2,363,773	-				-0.6
2,363,781	+				+1.2
2,363,781	+				-0.3
2,363,782	-				-1.3
2,363,782	-				-1.3
2,363,782	-				-2.0
2,363,807	+				+2.2
2,363,808	-				+1.4
2,363,818	-				-0.9
2,363,870	+		Sama_1936	0.15	-1.6
2,363,871	-		Sama_1936	0.15	+0.4
2,363,871	-		Sama_1936	0.15	-0.6
2,363,911	-		Sama_1936	0.20	+1.5
2,363,911	-		Sama_1936	0.20	-1.8
2,363,911	-		Sama_1936	0.20	-0.5
2,363,969	+		Sama_1936	0.27	-1.3
2,363,980	-		Sama_1936	0.28	-0.0
2,363,989	-		Sama_1936	0.29	-2.6
2,364,022	+		Sama_1936	0.33	+2.9
2,364,038	-		Sama_1936	0.35	-2.2
2,364,038	-		Sama_1936	0.35	-1.9
2,364,040	+		Sama_1936	0.35	-2.5
2,364,041	-		Sama_1936	0.35	-0.0
2,364,041	-		Sama_1936	0.35	-0.4
2,364,093	+		Sama_1936	0.42	-0.9
2,364,094	-		Sama_1936	0.42	-2.9
2,364,094	-		Sama_1936	0.42	-0.0
2,364,094	-		Sama_1936	0.42	+2.9
2,364,094	-		Sama_1936	0.42	-1.6
2,364,094	-		Sama_1936	0.42	-2.6
2,364,094	-		Sama_1936	0.42	-0.5
2,364,153	+		Sama_1936	0.49	-0.6
2,364,191	-		Sama_1936	0.54	-0.9
2,364,191	-		Sama_1936	0.54	-0.3
2,364,244	-		Sama_1936	0.60	+2.1
2,364,259	-		Sama_1936	0.62	-0.0
2,364,262	-		Sama_1936	0.62	+1.5
2,364,302	+		Sama_1936	0.67	+1.9
2,364,303	-		Sama_1936	0.67	-1.3
2,364,343	-		Sama_1936	0.72	-1.3
2,364,344	+		Sama_1936	0.72	+0.8
2,364,345	-		Sama_1936	0.72	-0.7
2,364,392	-		Sama_1936	0.78	-0.5
2,364,392	-		Sama_1936	0.78	-0.0
2,364,428	+		Sama_1936	0.82	-1.6
2,364,429	-		Sama_1936	0.82	-0.0
2,364,457	-		Sama_1936	0.86	-2.8
2,364,527	-				+1.8
2,364,527	-				-1.3
2,364,572	+				+0.5
2,364,582	+				+1.5
2,364,583	-				-1.4
2,364,588	-				+0.2
2,364,590	+				+2.2
2,364,590	+				+0.5
2,364,593	+				-1.0
2,364,594	-				-0.2
2,364,604	-				-0.8
2,364,609	-				+2.1
2,364,801	-		Sama_1937	0.23	-1.0
2,364,801	-		Sama_1937	0.23	+1.4
2,364,810	+		Sama_1937	0.24	+4.7
2,364,810	+		Sama_1937	0.24	-1.0
2,364,814	-		Sama_1937	0.24	+1.5
2,364,832	+		Sama_1937	0.27	+0.5
2,364,851	-		Sama_1937	0.30	-0.8
2,364,902	-		Sama_1937	0.37	+0.4
2,365,027	-		Sama_1937	0.54	+0.7
2,365,147	+		Sama_1937	0.71	+1.7
2,365,148	-		Sama_1937	0.71	-1.0
2,365,239	+		Sama_1937	0.84	-1.5
2,365,239	+		Sama_1937	0.84	-1.4
2,365,239	+		Sama_1937	0.84	-1.8
2,365,239	+		Sama_1937	0.84	-1.5
2,365,242	-		Sama_1937	0.85	-0.8
2,365,249	-		Sama_1937	0.86	-2.4
2,365,249	-		Sama_1937	0.86	-0.6
2,365,279	+		Sama_1937	0.90	+0.8
2,365,280	-				-1.0
2,365,304	-				+0.2
2,365,304	-				-0.8
2,365,324	+				+0.5
2,365,350	+				-0.8
2,365,358	+				+1.5
2,365,358	+				-1.0
2,365,359	-				-0.0
2,365,359	-				+4.7
2,365,414	-		Sama_1938	0.24	+4.8
2,365,453	-		Sama_1938	0.37	-1.9
2,365,457	-		Sama_1938	0.39	-2.8
2,365,589	+		Sama_1938	0.84	-0.8
2,365,690	-				-1.6