Strain Fitness in Shewanella amazonensis SB2B around Sama_1886

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
2,301,166	+		Sama_1885	0.75	-1.3
2,301,231	+		Sama_1885	0.79	-0.2
2,301,231	+		Sama_1885	0.79	+1.6
2,301,232	-		Sama_1885	0.79	-1.5
2,301,252	-		Sama_1885	0.81	-2.4
2,301,281	+		Sama_1885	0.83	-1.3
2,301,372	-		Sama_1885	0.89	-1.1
2,301,402	+				+0.5
2,301,402	+				-0.5
2,301,402	+				-0.5
2,301,537	+				-0.2
2,301,537	+				-0.4
2,301,628	-				+1.1
2,301,649	-				+2.5
2,301,668	-				-1.9
2,301,668	-				-0.9
2,301,668	-				+0.8
2,301,686	+				-1.2
2,301,686	+				-1.1
2,301,714	+				-1.3
2,301,715	-				-0.9
2,301,769	+				-1.8
2,301,807	+				+0.7
2,301,807	+				-1.1
2,301,807	+				-0.1
2,301,830	+				-1.7
2,301,830	+				+0.2
2,301,830	+				-1.0
2,301,831	-				-0.8
2,301,836	+				+4.3
2,301,836	+				-0.8
2,301,836	+				-0.1
2,301,874	-				+2.8
2,301,898	+				-0.2
2,301,899	-				-0.8
2,301,922	-				-1.2
2,301,930	+				+2.5
2,302,017	-				+0.5
2,302,017	-				+2.2
2,302,017	-				+0.2
2,302,057	+				-0.3
2,302,176	+		Sama_1886	0.30	-0.4
2,302,228	-		Sama_1886	0.40	-1.5
2,302,228	-		Sama_1886	0.40	-1.0
2,302,228	-		Sama_1886	0.40	+2.4
2,302,228	-		Sama_1886	0.40	+2.6
2,302,256	-		Sama_1886	0.45	-1.0
2,302,273	-		Sama_1886	0.48	-1.6
2,302,279	-		Sama_1886	0.49	-2.5
2,302,390	+		Sama_1886	0.70	-0.5
2,302,390	+		Sama_1886	0.70	+0.5
2,302,407	+		Sama_1886	0.74	+1.1
2,302,407	+		Sama_1886	0.74	-0.8
2,302,407	+		Sama_1886	0.74	-1.7
2,302,408	-		Sama_1886	0.74	-1.7
2,302,457	-		Sama_1886	0.83	-0.5
2,302,457	-		Sama_1886	0.83	-0.3
2,302,465	-		Sama_1886	0.85	-1.5
2,302,551	-				-0.1
2,302,586	+				-0.1
2,302,587	-				+0.1
2,302,587	-				+0.0
2,302,695	+				+0.1
2,302,696	-				-1.4
2,302,760	+		Sama_1887	0.12	-1.1
2,302,761	-		Sama_1887	0.12	+1.0
2,302,816	-		Sama_1887	0.15	-0.1
2,302,881	-		Sama_1887	0.19	-0.1
2,302,881	-		Sama_1887	0.19	+1.5
2,302,988	-		Sama_1887	0.25	-1.1
2,302,988	-		Sama_1887	0.25	-1.3
2,303,015	+		Sama_1887	0.26	-1.9
2,303,015	+		Sama_1887	0.26	+3.3
2,303,094	-		Sama_1887	0.30	+1.3
2,303,139	+		Sama_1887	0.33	+2.5
2,303,145	+		Sama_1887	0.33	-0.8
2,303,145	+		Sama_1887	0.33	+0.5
2,303,146	-		Sama_1887	0.33	+0.9
2,303,163	-		Sama_1887	0.34	-0.8
2,303,166	-		Sama_1887	0.34	-1.7
2,303,172	-		Sama_1887	0.35	+0.7
2,303,172	-		Sama_1887	0.35	-2.1
2,303,172	-		Sama_1887	0.35	-1.5
2,303,172	-		Sama_1887	0.35	-2.7
2,303,174	-		Sama_1887	0.35	+0.6
2,303,304	-		Sama_1887	0.42	-0.7
2,303,510	-		Sama_1887	0.53	+1.5