Strain Fitness in Shewanella amazonensis SB2B around Sama_1869

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
2,276,788	-		Sama_1867	0.85	+0.5
2,276,832	+				-1.7
2,276,832	+				-0.1
2,276,851	+				-2.7
2,276,851	+				+0.5
2,276,851	+				-2.4
2,276,851	+				+0.5
2,276,852	-				-0.5
2,276,852	-				-0.5
2,276,893	+				-0.1
2,277,008	+		Sama_1868	0.21	-0.8
2,277,008	+		Sama_1868	0.21	+1.6
2,277,011	+		Sama_1868	0.22	-0.3
2,277,011	+		Sama_1868	0.22	-0.4
2,277,012	-		Sama_1868	0.22	+0.9
2,277,026	-		Sama_1868	0.24	-0.5
2,277,200	+		Sama_1868	0.48	+3.7
2,277,200	+		Sama_1868	0.48	+0.5
2,277,201	-		Sama_1868	0.48	-0.1
2,277,201	-		Sama_1868	0.48	-0.5
2,277,242	+		Sama_1868	0.53	-0.5
2,277,341	+		Sama_1868	0.67	+1.5
2,277,341	+		Sama_1868	0.67	-0.5
2,277,470	+		Sama_1868	0.84	+2.2
2,277,522	+				+0.0
2,277,522	+				-1.5
2,277,581	+				-1.7
2,277,582	-				+0.2
2,277,636	-				-0.1
2,277,636	-				-1.7
2,277,636	-				+1.8
2,277,671	-				-0.0
2,277,771	-		Sama_1869	0.14	-0.9
2,277,782	-		Sama_1869	0.15	-1.6
2,277,894	-		Sama_1869	0.29	+1.7
2,277,944	-		Sama_1869	0.35	+1.5
2,277,991	-		Sama_1869	0.41	-1.7
2,278,121	-		Sama_1869	0.57	+1.5
2,278,121	-		Sama_1869	0.57	-1.7
2,278,121	-		Sama_1869	0.57	+1.0
2,278,126	+		Sama_1869	0.58	-0.6
2,278,155	+		Sama_1869	0.61	-0.7
2,278,155	+		Sama_1869	0.61	-0.9
2,278,155	+		Sama_1869	0.61	-0.4
2,278,155	+		Sama_1869	0.61	-2.8
2,278,156	-		Sama_1869	0.61	-0.5
2,278,156	-		Sama_1869	0.61	-0.5
2,278,156	-		Sama_1869	0.61	-0.1
2,278,156	-		Sama_1869	0.61	+2.2
2,278,156	-		Sama_1869	0.61	+3.8
2,278,165	+		Sama_1869	0.62	-1.0
2,278,166	-		Sama_1869	0.63	-0.3
2,278,166	-		Sama_1869	0.63	-0.8
2,278,176	-		Sama_1869	0.64	-1.0
2,278,244	+		Sama_1869	0.72	+0.2
2,278,245	-		Sama_1869	0.72	-1.3
2,278,276	+		Sama_1869	0.76	+1.2
2,278,276	+		Sama_1869	0.76	-1.3
2,278,276	+		Sama_1869	0.76	-0.1
2,278,277	-		Sama_1869	0.76	-0.5
2,278,277	-		Sama_1869	0.76	-1.9
2,278,277	-		Sama_1869	0.76	+1.0
2,278,347	+		Sama_1869	0.85	+1.0
2,278,347	+		Sama_1869	0.85	+1.5
2,278,348	-		Sama_1869	0.85	+3.0
2,278,355	-		Sama_1869	0.86	-1.7
2,278,457	+				+0.5
2,278,468	+				-0.5
2,278,468	+				-1.1
2,278,469	-				+1.1
2,278,494	+				+2.1
2,278,494	+				+2.5
2,278,503	+				+1.1
2,278,503	+				-1.2
2,278,503	+				-1.0
2,278,508	+				+0.1
2,278,508	+				-1.3
2,278,508	+				-1.9
2,278,509	-				+0.5
2,278,509	-				-1.9
2,278,509	-				-0.1
2,278,509	-				-0.3
2,278,514	-				-0.5
2,278,605	+				+0.5
2,278,613	-				+0.9
2,278,639	+				+2.3
2,278,639	+				+0.5
2,278,640	-				+0.9
2,278,641	+				-1.9
2,278,641	+				-1.3
2,278,662	-				-0.7
2,278,663	+				-0.1
2,278,663	+				-2.2
2,278,663	+				-1.5
2,278,685	+				+0.5
2,278,717	-				-1.0
2,278,726	+				-1.3
2,278,805	-				-1.1
2,278,886	-				-2.0
2,279,029	+	fadE	Sama_1870	0.13	+0.5
2,279,225	+	fadE	Sama_1870	0.21	-1.4
2,279,225	+	fadE	Sama_1870	0.21	-0.7
2,279,226	-	fadE	Sama_1870	0.21	-0.3
2,279,412	+	fadE	Sama_1870	0.29	+0.0
2,279,412	+	fadE	Sama_1870	0.29	-0.5