Strain Fitness in Shewanella amazonensis SB2B around Sama_1772

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
2,165,047	-				-2.3
2,165,105	+				-2.0
2,165,136	-				-0.5
2,165,176	-				+1.0
2,165,179	-				-2.1
2,165,179	-				-1.5
2,165,179	-				+0.3
2,165,180	+				+2.6
2,165,180	+				-1.5
2,165,180	+				-0.3
2,165,180	+				-1.1
2,165,181	-				-0.3
2,165,181	-				-0.5
2,165,181	-				-1.3
2,165,181	-				+0.1
2,165,181	-				-1.7
2,165,182	-				-1.1
2,165,183	-				-1.7
2,165,184	-				-2.1
2,165,221	-				+0.1
2,165,274	+				-0.1
2,165,435	-		Sama_1771	0.34	-0.1
2,165,459	+		Sama_1771	0.38	-3.1
2,165,459	+		Sama_1771	0.38	+1.5
2,165,460	-		Sama_1771	0.38	-1.5
2,165,470	+		Sama_1771	0.40	+0.5
2,165,470	+		Sama_1771	0.40	-2.0
2,165,470	+		Sama_1771	0.40	+0.9
2,165,470	+		Sama_1771	0.40	-2.0
2,165,471	-		Sama_1771	0.41	-1.1
2,165,471	-		Sama_1771	0.41	-1.7
2,165,561	+		Sama_1771	0.59	-0.1
2,165,562	-		Sama_1771	0.59	-1.5
2,165,608	+		Sama_1771	0.68	+1.1
2,165,609	-		Sama_1771	0.68	-1.3
2,165,644	+		Sama_1771	0.75	-1.1
2,165,704	+		Sama_1771	0.87	-1.1
2,165,704	+		Sama_1771	0.87	-1.5
2,165,705	-		Sama_1771	0.87	-1.9
2,165,724	+				-1.0
2,165,736	+				-1.5
2,165,767	+				+3.7
2,165,767	+				+2.9
2,165,771	+				-1.3
2,165,772	-				-0.3
2,165,772	-				-1.5
2,165,803	-				-2.3
2,165,803	-				-1.9
2,165,887	+				-3.1
2,166,808	+		Sama_1772	0.30	-1.3
2,166,860	+		Sama_1772	0.32	-1.3
2,167,387	+		Sama_1772	0.51	+1.5
2,167,533	+		Sama_1772	0.57	-1.1
2,167,537	+		Sama_1772	0.57	-1.3
2,168,261	+		Sama_1772	0.83	+3.0
2,168,261	+		Sama_1772	0.83	-0.1
2,168,261	+		Sama_1772	0.83	-1.3
2,168,460	+		Sama_1772	0.90	-0.1
2,168,503	+				-1.7
2,168,742	+				+0.0
2,169,429	+				+0.8
2,169,430	-				+1.3
2,169,493	+				+1.9
2,169,493	+				-0.3
2,169,518	+				-1.3
2,169,518	+				-1.5
2,169,518	+				-1.7
2,169,518	+				+2.5
2,169,518	+				-0.5
2,169,518	+				-1.7
2,169,518	+				-0.9
2,169,519	-				+0.8
2,169,520	+				-1.5
2,169,520	+				-2.0
2,169,520	+				-2.0
2,169,520	+				-1.5
2,169,520	+				+2.2
2,169,522	+				-0.5
2,169,522	+				-1.9
2,169,522	+				+0.4
2,169,523	-				+0.5
2,169,523	-				+0.1
2,169,523	-				-0.9
2,169,550	+				-0.9
2,169,551	-				+2.7
2,169,676	+		Sama_1774	0.18	-0.9