Strain Fitness in Shewanella amazonensis SB2B around Sama_1752

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
2,141,998	+		Sama_1751	0.39	+0.3
2,142,023	+		Sama_1751	0.42	-0.1
2,142,024	-		Sama_1751	0.42	-1.4
2,142,035	+		Sama_1751	0.43	+0.5
2,142,220	+		Sama_1751	0.63	-1.0
2,142,221	-		Sama_1751	0.64	+0.1
2,142,315	+		Sama_1751	0.74	-0.5
2,142,334	+		Sama_1751	0.76	-2.0
2,142,334	+		Sama_1751	0.76	+2.4
2,142,336	+		Sama_1751	0.76	-1.1
2,142,336	+		Sama_1751	0.76	+0.6
2,142,336	+		Sama_1751	0.76	+3.0
2,142,336	+		Sama_1751	0.76	-0.5
2,142,337	-		Sama_1751	0.76	-1.4
2,142,337	-		Sama_1751	0.76	-2.2
2,142,337	-		Sama_1751	0.76	+2.0
2,142,496	+				-2.1
2,142,496	+				-0.1
2,142,497	-				-2.1
2,142,599	+				-1.5
2,142,599	+				-3.1
2,142,600	-				-0.5
2,142,651	+				+0.5
2,142,651	+				-0.5
2,142,651	+				+0.5
2,142,652	-				+0.3
2,142,652	-				+0.9
2,142,668	-				-1.1
2,142,702	+				+3.8
2,142,712	+				-0.4
2,142,713	-				+1.9
2,142,713	-				-2.0
2,142,737	+				-0.0
2,142,750	-				+0.9
2,142,755	+				+1.8
2,142,755	+				-0.0
2,142,766	-				-0.5
2,142,775	+				-1.1
2,142,776	-				-0.4
2,142,780	+				-1.4
2,142,780	+				-0.5
2,142,781	-				-0.1
2,142,781	-				-2.1
2,142,781	-				-2.5
2,142,781	-				-1.9
2,142,781	-				-0.9
2,142,781	-				+2.0
2,142,781	-				-1.2
2,142,784	+				-0.5
2,142,784	+				-1.7
2,142,785	-				-1.9
2,142,785	-				-2.5
2,142,785	-				-1.5
2,142,786	+				-0.9
2,142,787	-				-0.1
2,142,802	+				-1.4
2,142,942	+				+2.5
2,143,007	-				-2.1
2,143,025	-				-0.9
2,143,207	-		Sama_1752	0.15	-0.9
2,143,268	+		Sama_1752	0.18	+0.5
2,143,269	-		Sama_1752	0.18	+4.8
2,143,269	-		Sama_1752	0.18	-1.1
2,143,269	-		Sama_1752	0.18	+0.8
2,143,316	+		Sama_1752	0.21	-1.1
2,143,317	-		Sama_1752	0.21	-0.9
2,143,317	-		Sama_1752	0.21	-1.5
2,143,317	-		Sama_1752	0.21	+1.1
2,143,353	-		Sama_1752	0.24	+1.9
2,143,368	+		Sama_1752	0.25	+1.9
2,143,368	+		Sama_1752	0.25	+1.5
2,143,369	-		Sama_1752	0.25	-1.7
2,143,374	+		Sama_1752	0.25	-0.8
2,143,408	-		Sama_1752	0.27	+1.6
2,143,419	+		Sama_1752	0.28	+2.7
2,143,459	+		Sama_1752	0.30	-0.9
2,143,460	-		Sama_1752	0.30	-1.6
2,143,484	+		Sama_1752	0.32	-2.0
2,143,508	+		Sama_1752	0.33	-1.3
2,143,509	-		Sama_1752	0.33	-0.9
2,143,527	+		Sama_1752	0.35	+0.9
2,143,530	+		Sama_1752	0.35	-0.1
2,143,530	+		Sama_1752	0.35	-1.5
2,143,531	-		Sama_1752	0.35	+0.5
2,143,534	-		Sama_1752	0.35	-1.5
2,143,534	-		Sama_1752	0.35	+1.8
2,143,564	+		Sama_1752	0.37	-1.3
2,143,613	-		Sama_1752	0.40	+1.9
2,143,647	+		Sama_1752	0.42	+0.7
2,143,690	-		Sama_1752	0.45	-1.5
2,143,776	+		Sama_1752	0.50	-0.7
2,143,796	+		Sama_1752	0.51	-0.5
2,143,797	-		Sama_1752	0.52	-0.7
2,143,824	+		Sama_1752	0.53	-0.3
2,143,825	-		Sama_1752	0.53	-0.7
2,144,025	+		Sama_1752	0.66	+4.4
2,144,063	+		Sama_1752	0.68	-0.5
2,144,255	+		Sama_1752	0.80	+0.7
2,144,297	+		Sama_1752	0.83	-0.3
2,144,298	-		Sama_1752	0.83	+2.5
2,144,298	-		Sama_1752	0.83	-1.3
2,144,562	-				-1.0
2,144,630	-				+2.2
2,144,637	-				-3.0
2,144,681	+		Sama_1753	0.11	-1.9
2,144,682	-		Sama_1753	0.11	+3.2
2,144,682	-		Sama_1753	0.11	+1.5
2,144,682	-		Sama_1753	0.11	-2.2
2,144,682	-		Sama_1753	0.11	-0.7
2,144,684	-		Sama_1753	0.12	-1.9
2,144,684	-		Sama_1753	0.12	-2.3
2,144,835	+		Sama_1753	0.34	-1.7
2,144,836	-		Sama_1753	0.34	-1.1
2,144,836	-		Sama_1753	0.34	+0.1
2,144,836	-		Sama_1753	0.34	+0.9
2,144,839	+		Sama_1753	0.34	-1.7
2,144,839	+		Sama_1753	0.34	-1.4
2,144,839	+		Sama_1753	0.34	+3.4
2,144,839	+		Sama_1753	0.34	-1.0
2,144,839	+		Sama_1753	0.34	-1.1
2,144,839	+		Sama_1753	0.34	-0.1
2,144,839	+		Sama_1753	0.34	+0.3
2,144,840	-		Sama_1753	0.35	-1.9
2,144,840	-		Sama_1753	0.35	-1.7
2,144,840	-		Sama_1753	0.35	+0.1
2,144,840	-		Sama_1753	0.35	-1.9
2,144,840	-		Sama_1753	0.35	-1.1
2,144,840	-		Sama_1753	0.35	-1.3
2,144,840	-		Sama_1753	0.35	+1.7
2,144,840	-		Sama_1753	0.35	-1.1
2,144,840	-		Sama_1753	0.35	-1.9
2,144,840	-		Sama_1753	0.35	+2.0
2,144,840	-		Sama_1753	0.35	+0.3
2,144,840	-		Sama_1753	0.35	+0.5
2,144,840	-		Sama_1753	0.35	-0.5
2,144,841	+		Sama_1753	0.35	-2.4
2,144,841	+		Sama_1753	0.35	-0.1
2,144,841	+		Sama_1753	0.35	+1.9
2,144,841	+		Sama_1753	0.35	-2.4
2,144,841	+		Sama_1753	0.35	-0.3
2,144,841	+		Sama_1753	0.35	-0.3
2,144,841	+		Sama_1753	0.35	-0.5
2,144,842	-		Sama_1753	0.35	-0.3
2,144,842	-		Sama_1753	0.35	-1.0
2,144,842	-		Sama_1753	0.35	-2.4
2,144,842	-		Sama_1753	0.35	+1.1
2,144,842	-		Sama_1753	0.35	-0.5
2,144,842	-		Sama_1753	0.35	-0.1
2,144,842	-		Sama_1753	0.35	-0.9
2,144,842	-		Sama_1753	0.35	-0.9
2,144,842	-		Sama_1753	0.35	+3.2
2,144,842	-		Sama_1753	0.35	+0.5
2,144,842	-		Sama_1753	0.35	+0.2
2,144,842	-		Sama_1753	0.35	-0.3
2,144,842	-		Sama_1753	0.35	-1.5
2,144,842	-		Sama_1753	0.35	-2.4
2,144,842	-		Sama_1753	0.35	+4.5
2,144,877	+		Sama_1753	0.40	+0.1
2,144,898	+		Sama_1753	0.43	-1.5
2,144,898	+		Sama_1753	0.43	+0.8
2,144,898	+		Sama_1753	0.43	-2.1
2,144,899	-		Sama_1753	0.43	+4.0
2,144,899	-		Sama_1753	0.43	-2.4
2,144,899	-		Sama_1753	0.43	+0.5
2,145,125	+		Sama_1753	0.77	-1.7
2,145,125	+		Sama_1753	0.77	-0.9
2,145,126	-		Sama_1753	0.77	+0.1
2,145,126	-		Sama_1753	0.77	-1.3
2,145,263	+				+0.0
2,145,263	+				-2.4
2,145,264	-				-0.1
2,145,269	+				+1.6
2,145,284	+				+0.1
2,145,284	+				-2.2
2,145,285	-				-0.4
2,145,285	-				-0.1
2,145,310	+				+0.6
2,145,311	-				-1.7
2,145,311	-				-2.8
2,145,324	+				-0.5
2,145,325	-				+0.0
2,145,325	-				+1.9
2,145,327	-				-1.5
2,145,327	-				+0.5
2,145,332	+				-1.5
2,145,333	-				-0.7
2,145,379	+				-3.1
2,145,412	+				-0.1
2,145,412	+				+1.8
2,145,413	-				-1.3
2,145,438	+				-2.2
2,145,445	-				-0.3
2,145,472	-				-0.9
2,145,549	-				-0.9
2,145,567	-				-0.7
2,145,567	-				-0.5