Strain Fitness in Shewanella amazonensis SB2B around Sama_1499

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
1,814,339	+		Sama_1498	0.75	-2.1
1,814,384	+		Sama_1498	0.77	+1.1
1,814,444	+		Sama_1498	0.80	-2.4
1,814,444	+		Sama_1498	0.80	-0.1
1,814,444	+		Sama_1498	0.80	-2.7
1,814,444	+		Sama_1498	0.80	-1.8
1,814,444	+		Sama_1498	0.80	+0.1
1,814,444	+		Sama_1498	0.80	-2.0
1,814,444	+		Sama_1498	0.80	-0.3
1,814,444	+		Sama_1498	0.80	-1.2
1,814,444	+		Sama_1498	0.80	-1.8
1,814,445	-		Sama_1498	0.80	-0.7
1,814,445	-		Sama_1498	0.80	-1.0
1,814,445	-		Sama_1498	0.80	-1.7
1,814,455	+		Sama_1498	0.80	+2.3
1,814,489	+		Sama_1498	0.82	+3.1
1,814,495	+		Sama_1498	0.82	-1.7
1,814,495	+		Sama_1498	0.82	-1.3
1,814,495	+		Sama_1498	0.82	+1.8
1,814,495	+		Sama_1498	0.82	-1.3
1,814,495	+		Sama_1498	0.82	+0.2
1,814,495	+		Sama_1498	0.82	+1.5
1,814,495	+		Sama_1498	0.82	+4.6
1,814,495	+		Sama_1498	0.82	-2.9
1,814,495	+		Sama_1498	0.82	-0.5
1,814,495	+		Sama_1498	0.82	+0.7
1,814,495	+		Sama_1498	0.82	-0.5
1,814,496	-		Sama_1498	0.82	-1.5
1,814,496	-		Sama_1498	0.82	-0.2
1,814,496	-		Sama_1498	0.82	+3.2
1,814,496	-		Sama_1498	0.82	-1.1
1,814,525	+		Sama_1498	0.83	+0.5
1,814,525	+		Sama_1498	0.83	+2.5
1,814,551	-		Sama_1498	0.85	+1.1
1,814,551	-		Sama_1498	0.85	-2.2
1,814,719	-				-2.7
1,814,792	+				+0.8
1,814,801	+				+0.5
1,814,801	+				+5.7
1,814,801	+				-1.0
1,814,801	+				-1.3
1,814,802	-				-1.5
1,814,802	-				-2.2
1,814,824	+				-1.3
1,814,824	+				+3.1
1,814,825	-				-0.5
1,814,905	-				+0.0
1,814,905	-				-2.2
1,814,916	+				-0.8
1,814,916	+				-0.8
1,814,917	-				+0.7
1,815,032	+				-0.8
1,815,032	+				-2.0
1,815,033	-				-1.2
1,815,084	+				+0.9
1,815,121	+				-2.8
1,815,192	-				+0.5
1,815,219	-				+2.6
1,815,221	+				-1.7
1,815,221	+				-1.1
1,815,222	-				+1.8
1,815,252	-				+0.5
1,815,266	+				-1.7
1,815,266	+				-1.5
1,815,266	+				+0.5
1,815,267	-				-0.5
1,815,267	-				+0.9
1,815,285	+				-0.1
1,815,285	+				-2.0
1,815,285	+				-0.2
1,815,285	+				+1.9
1,815,285	+				-0.2
1,815,285	+				+1.5
1,815,286	-				-0.5
1,815,286	-				-1.8
1,815,298	+				-0.7
1,815,356	+				-2.1
1,815,500	+		Sama_1499	0.13	+0.9
1,815,500	+		Sama_1499	0.13	+0.1
1,815,501	-		Sama_1499	0.13	-0.8
1,815,573	+		Sama_1499	0.18	+2.6
1,815,573	+		Sama_1499	0.18	+3.4
1,815,574	-		Sama_1499	0.18	-3.1
1,815,636	+		Sama_1499	0.22	+0.5
1,815,636	+		Sama_1499	0.22	+0.5
1,815,637	-		Sama_1499	0.22	-0.8
1,815,637	-		Sama_1499	0.22	-0.1
1,815,637	-		Sama_1499	0.22	-1.0
1,815,637	-		Sama_1499	0.22	-1.0
1,815,637	-		Sama_1499	0.22	+1.2
1,815,650	+		Sama_1499	0.23	-0.6
1,815,651	-		Sama_1499	0.23	-0.3
1,815,653	+		Sama_1499	0.23	-0.7
1,815,653	+		Sama_1499	0.23	+0.9
1,815,654	-		Sama_1499	0.23	-0.1
1,815,690	-		Sama_1499	0.25	-0.5
1,815,719	+		Sama_1499	0.27	-0.6
1,815,719	+		Sama_1499	0.27	+0.5
1,815,719	+		Sama_1499	0.27	-0.3
1,815,719	+		Sama_1499	0.27	-3.5
1,815,719	+		Sama_1499	0.27	+3.0
1,815,719	+		Sama_1499	0.27	-1.5
1,815,719	+		Sama_1499	0.27	+1.8
1,815,720	-		Sama_1499	0.27	-0.8
1,815,720	-		Sama_1499	0.27	+1.5
1,815,720	-		Sama_1499	0.27	+5.4
1,815,721	+		Sama_1499	0.27	+1.5
1,815,721	+		Sama_1499	0.27	-2.0
1,815,721	+		Sama_1499	0.27	-0.7
1,815,721	+		Sama_1499	0.27	+1.1
1,815,721	+		Sama_1499	0.27	+4.4
1,815,721	+		Sama_1499	0.27	-1.5
1,815,721	+		Sama_1499	0.27	+0.5
1,815,721	+		Sama_1499	0.27	-0.1
1,815,721	+		Sama_1499	0.27	-0.4
1,815,721	+		Sama_1499	0.27	-1.1
1,815,721	+		Sama_1499	0.27	-1.5
1,815,721	+		Sama_1499	0.27	-2.4
1,815,721	+		Sama_1499	0.27	+2.0
1,815,722	-		Sama_1499	0.27	-0.8
1,815,722	-		Sama_1499	0.27	-1.7
1,815,722	-		Sama_1499	0.27	+0.4
1,815,722	-		Sama_1499	0.27	-2.0
1,815,722	-		Sama_1499	0.27	-0.9
1,815,722	-		Sama_1499	0.27	+1.2
1,815,722	-		Sama_1499	0.27	-0.2
1,815,722	-		Sama_1499	0.27	-0.1
1,815,722	-		Sama_1499	0.27	+0.1
1,815,722	-		Sama_1499	0.27	+1.7
1,815,722	-		Sama_1499	0.27	-1.3
1,815,722	-		Sama_1499	0.27	+1.5
1,815,722	-		Sama_1499	0.27	+0.6
1,815,722	-		Sama_1499	0.27	-0.1
1,815,725	+		Sama_1499	0.27	-0.2
1,815,769	-		Sama_1499	0.30	-1.5
1,815,842	-		Sama_1499	0.35	+0.0
1,815,926	+		Sama_1499	0.40	-0.5
1,815,927	-		Sama_1499	0.40	-1.3
1,815,927	-		Sama_1499	0.40	+2.4
1,815,938	+		Sama_1499	0.41	+0.5
1,816,028	+		Sama_1499	0.47	+0.4
1,816,029	-		Sama_1499	0.47	-3.1
1,816,068	-		Sama_1499	0.49	-2.7
1,816,129	+		Sama_1499	0.53	-2.9
1,816,130	-		Sama_1499	0.53	+1.7
1,816,130	-		Sama_1499	0.53	-2.2
1,816,130	-		Sama_1499	0.53	+1.5
1,816,154	+		Sama_1499	0.55	+1.5
1,816,168	+		Sama_1499	0.56	-2.8
1,816,168	+		Sama_1499	0.56	+0.5
1,816,168	+		Sama_1499	0.56	+2.3
1,816,169	-		Sama_1499	0.56	+2.3
1,816,173	+		Sama_1499	0.56	-2.2
1,816,174	-		Sama_1499	0.56	-1.8
1,816,174	-		Sama_1499	0.56	-1.4
1,816,174	-		Sama_1499	0.56	+1.1
1,816,181	-		Sama_1499	0.56	-3.1
1,816,273	-		Sama_1499	0.62	-2.0
1,816,273	-		Sama_1499	0.62	-2.0
1,816,325	+		Sama_1499	0.66	-0.1
1,816,350	+		Sama_1499	0.67	+2.4
1,816,350	+		Sama_1499	0.67	+2.6
1,816,350	+		Sama_1499	0.67	-0.3
1,816,351	-		Sama_1499	0.67	-1.3
1,816,351	-		Sama_1499	0.67	-1.6
1,816,461	-		Sama_1499	0.74	-1.3
1,816,461	-		Sama_1499	0.74	-0.1
1,816,478	+		Sama_1499	0.75	-1.1
1,816,479	-		Sama_1499	0.75	-0.9
1,816,548	-		Sama_1499	0.80	-0.2
1,816,603	+		Sama_1499	0.83	+0.5
1,816,603	+		Sama_1499	0.83	-0.7
1,816,604	-		Sama_1499	0.83	+2.7
1,816,604	-		Sama_1499	0.83	-0.7
1,816,604	-		Sama_1499	0.83	-3.0
1,816,664	+		Sama_1499	0.87	-2.2
1,816,733	-				-0.3
1,816,846	+				-2.2
1,816,846	+				-1.8
1,816,865	+				+5.9
1,816,866	-				-2.2
1,816,937	-				-1.6
1,816,937	-				-1.7
1,816,937	-				-0.7
1,816,937	-				-2.8
1,816,937	-				-1.5
1,816,975	-				+1.8
1,816,992	-				-2.8
1,817,074	-				-1.8
1,817,074	-				+0.8
1,817,088	+				-0.8
1,817,133	+				-0.8
1,817,133	+				-1.8
1,817,133	+				-1.3
1,817,133	+				+2.7
1,817,133	+				-1.1
1,817,138	+				-0.5
1,817,138	+				+0.5
1,817,138	+				-3.0
1,817,138	+				-0.5
1,817,138	+				-1.1
1,817,139	-				-1.5
1,817,154	+				+3.1
1,817,163	+				-0.5
1,817,164	-				-2.1
1,817,181	+				+5.0
1,817,181	+				-1.4
1,817,182	-				-0.1
1,817,189	+				-1.7
1,817,231	-				-1.8
1,817,284	-				-1.7
1,817,284	-				-0.2
1,817,305	+				-1.1
1,817,305	+				+2.3
1,817,305	+				+1.6
1,817,306	-				+0.9
1,817,410	+				-1.3
1,817,411	-				-0.5
1,817,494	+				-2.6
1,817,494	+				-2.4
1,817,495	-				+4.0
1,817,653	+				-0.1
1,817,653	+				-1.5
1,817,687	+				-0.3
1,817,688	-				-1.0
1,817,743	+				+1.2
1,817,744	-				+0.7
1,817,828	+				+0.8
1,817,829	-				-0.1