Strain Fitness in Shewanella amazonensis SB2B around Sama_1351

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
1,639,416	+		Sama_1349	0.43	+2.0
1,639,582	-		Sama_1349	0.65	-1.6
1,639,621	-		Sama_1349	0.70	+1.0
1,639,828	+				-0.0
1,639,829	-				+1.5
1,639,829	-				+1.2
1,639,829	-				-1.6
1,640,014	-		Sama_1350	0.43	-0.5
1,640,058	-		Sama_1350	0.56	-2.2
1,640,058	-		Sama_1350	0.56	-2.0
1,640,061	+		Sama_1350	0.57	-1.6
1,640,062	-		Sama_1350	0.57	-1.9
1,640,063	+		Sama_1350	0.58	-0.8
1,640,120	+		Sama_1350	0.75	-2.2
1,640,121	-		Sama_1350	0.75	+2.5
1,640,121	-		Sama_1350	0.75	-1.8
1,640,202	+				-0.5
1,640,204	+				-1.6
1,640,204	+				+0.5
1,640,205	-				+0.3
1,640,205	-				+0.8
1,640,222	-				-2.6
1,640,222	-				+1.7
1,640,269	+				-1.3
1,640,269	+				+1.9
1,640,270	-				-0.6
1,640,335	+				-2.3
1,640,335	+				-1.1
1,640,336	-				+0.2
1,640,336	-				-1.9
1,640,336	-				-0.0
1,640,336	-				+2.7
1,640,438	+		Sama_1351	0.18	+0.5
1,640,439	-		Sama_1351	0.18	+1.5
1,640,439	-		Sama_1351	0.18	-2.5
1,640,484	-		Sama_1351	0.22	+1.1
1,640,509	-		Sama_1351	0.24	-1.3
1,640,509	-		Sama_1351	0.24	-1.4
1,640,528	+		Sama_1351	0.26	-2.8
1,640,609	-		Sama_1351	0.33	-0.8
1,640,714	-		Sama_1351	0.42	+1.8
1,640,933	-		Sama_1351	0.61	-0.2
1,640,945	+		Sama_1351	0.62	-0.8
1,640,946	-		Sama_1351	0.62	-2.0
1,640,946	-		Sama_1351	0.62	-0.3
1,640,946	-		Sama_1351	0.62	-0.2
1,641,038	-		Sama_1351	0.70	-1.5
1,641,150	-		Sama_1351	0.80	-0.8
1,641,199	-		Sama_1351	0.84	+0.8
1,641,359	+				+1.7
1,641,434	-				+1.9
1,641,479	-				-0.6
1,641,479	-				-1.0
1,641,534	-				+1.2
1,641,591	+		Sama_1352	0.30	-0.8
1,641,592	-		Sama_1352	0.30	-0.0
1,641,592	-		Sama_1352	0.30	+0.7
1,641,594	-		Sama_1352	0.31	+4.0
1,641,733	+		Sama_1352	0.85	-1.8
1,641,754	+				-1.3
1,641,842	+				+0.5
1,641,918	+				-2.3
1,641,919	-				+1.1
1,641,923	-				-3.1
1,641,923	-				-1.6
1,641,955	+		Sama_1353	0.11	-0.0
1,641,979	+		Sama_1353	0.13	-0.5
1,642,043	-		Sama_1353	0.20	+0.7
1,642,049	-		Sama_1353	0.20	-0.2
1,642,051	+		Sama_1353	0.21	+1.0
1,642,117	+		Sama_1353	0.27	+3.1
1,642,117	+		Sama_1353	0.27	-1.3
1,642,118	-		Sama_1353	0.27	-1.6
1,642,118	-		Sama_1353	0.27	+0.2
1,642,118	-		Sama_1353	0.27	-1.9
1,642,119	+		Sama_1353	0.27	-1.4
1,642,120	-		Sama_1353	0.27	-3.3
1,642,172	-		Sama_1353	0.32	+1.1
1,642,172	-		Sama_1353	0.32	+0.6
1,642,223	-		Sama_1353	0.37	-2.5
1,642,246	+		Sama_1353	0.40	-1.0
1,642,246	+		Sama_1353	0.40	-3.6
1,642,331	-		Sama_1353	0.48	-0.2