Strain Fitness in Shewanella amazonensis SB2B around Sama_1268

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
1,553,225	+		Sama_1267	0.18	-0.8
1,553,225	+		Sama_1267	0.18	-0.4
1,553,271	-		Sama_1267	0.22	-2.8
1,553,331	+		Sama_1267	0.27	-2.1
1,553,331	+		Sama_1267	0.27	+2.7
1,553,331	+		Sama_1267	0.27	-3.2
1,553,332	-		Sama_1267	0.27	-0.1
1,553,333	+		Sama_1267	0.27	+1.6
1,553,334	-		Sama_1267	0.27	-1.8
1,553,334	-		Sama_1267	0.27	+3.1
1,553,334	-		Sama_1267	0.27	+0.6
1,553,334	-		Sama_1267	0.27	-1.2
1,553,459	+		Sama_1267	0.38	-2.8
1,553,536	+		Sama_1267	0.45	-0.8
1,553,536	+		Sama_1267	0.45	-1.9
1,553,537	-		Sama_1267	0.45	+1.8
1,553,542	+		Sama_1267	0.45	-2.4
1,553,542	+		Sama_1267	0.45	-0.8
1,553,542	+		Sama_1267	0.45	-2.0
1,553,542	+		Sama_1267	0.45	-1.8
1,553,542	+		Sama_1267	0.45	-1.8
1,553,542	+		Sama_1267	0.45	-1.1
1,553,543	-		Sama_1267	0.45	+4.5
1,553,543	-		Sama_1267	0.45	-1.2
1,553,543	-		Sama_1267	0.45	-0.4
1,553,646	+		Sama_1267	0.54	-1.4
1,553,647	-		Sama_1267	0.55	-0.4
1,553,679	+		Sama_1267	0.57	-0.1
1,553,679	+		Sama_1267	0.57	+1.0
1,553,679	+		Sama_1267	0.57	+4.6
1,553,679	+		Sama_1267	0.57	-0.6
1,553,679	+		Sama_1267	0.57	-1.5
1,553,679	+		Sama_1267	0.57	-0.9
1,553,679	+		Sama_1267	0.57	-0.4
1,553,679	+		Sama_1267	0.57	-0.4
1,553,680	-		Sama_1267	0.57	-0.8
1,553,680	-		Sama_1267	0.57	-0.9
1,553,680	-		Sama_1267	0.57	-2.3
1,553,680	-		Sama_1267	0.57	-1.4
1,553,680	-		Sama_1267	0.57	+1.3
1,553,681	+		Sama_1267	0.58	-1.1
1,553,681	+		Sama_1267	0.58	-1.9
1,553,681	+		Sama_1267	0.58	-0.4
1,553,681	+		Sama_1267	0.58	-1.2
1,553,682	-		Sama_1267	0.58	-2.5
1,553,724	+		Sama_1267	0.61	-3.0
1,553,725	-		Sama_1267	0.61	+0.2
1,553,725	-		Sama_1267	0.61	-1.1
1,553,750	+		Sama_1267	0.64	-1.8
1,553,750	+		Sama_1267	0.64	-1.6
1,553,771	+		Sama_1267	0.65	-1.9
1,553,771	+		Sama_1267	0.65	-0.9
1,553,771	+		Sama_1267	0.65	-2.2
1,553,771	+		Sama_1267	0.65	-2.0
1,553,772	-		Sama_1267	0.65	+1.6
1,553,772	-		Sama_1267	0.65	-0.8
1,553,772	-		Sama_1267	0.65	-2.9
1,553,772	-		Sama_1267	0.65	-1.9
1,553,772	-		Sama_1267	0.65	-1.3
1,553,772	-		Sama_1267	0.65	-0.4
1,553,772	-		Sama_1267	0.65	-0.4
1,553,772	-		Sama_1267	0.65	+0.6
1,553,774	-		Sama_1267	0.66	-1.4
1,553,774	-		Sama_1267	0.66	+2.1
1,553,847	+		Sama_1267	0.72	-0.6
1,553,864	+		Sama_1267	0.73	-1.6
1,553,864	+		Sama_1267	0.73	-1.0
1,553,898	+		Sama_1267	0.76	+1.1
1,553,899	-		Sama_1267	0.77	-1.6
1,553,899	-		Sama_1267	0.77	+1.6
1,553,936	-		Sama_1267	0.80	-1.9
1,553,964	+		Sama_1267	0.82	-0.2
1,554,077	+				-0.8
1,554,174	+				+3.0
1,554,399	+				-1.6
1,554,399	+				+2.2
1,554,432	-				-1.2
1,554,488	-		Sama_1268	0.11	-1.4
1,554,520	+		Sama_1268	0.12	+2.3
1,554,689	-		Sama_1268	0.17	+2.3
1,554,719	+		Sama_1268	0.18	+1.6
1,554,719	+		Sama_1268	0.18	-1.9
1,554,720	-		Sama_1268	0.18	-0.0
1,554,831	+		Sama_1268	0.22	-1.2
1,554,831	+		Sama_1268	0.22	+0.8
1,554,831	+		Sama_1268	0.22	-0.4
1,554,831	+		Sama_1268	0.22	-1.4
1,554,832	-		Sama_1268	0.22	-0.0
1,554,832	-		Sama_1268	0.22	-1.2
1,554,832	-		Sama_1268	0.22	-1.8
1,554,840	+		Sama_1268	0.22	+0.1
1,554,840	+		Sama_1268	0.22	-2.1
1,554,840	+		Sama_1268	0.22	-0.4
1,554,840	+		Sama_1268	0.22	-2.4
1,554,861	+		Sama_1268	0.23	-1.0
1,554,916	+		Sama_1268	0.25	+1.2
1,554,916	+		Sama_1268	0.25	-3.0
1,554,916	+		Sama_1268	0.25	-0.2
1,554,916	+		Sama_1268	0.25	-0.4
1,555,024	+		Sama_1268	0.28	-0.4
1,555,140	+		Sama_1268	0.32	-0.8
1,555,173	+		Sama_1268	0.33	-0.9
1,555,174	-		Sama_1268	0.33	-1.1
1,555,174	-		Sama_1268	0.33	+2.1
1,555,174	-		Sama_1268	0.33	-1.5
1,555,179	-		Sama_1268	0.33	+1.1
1,555,179	-		Sama_1268	0.33	-1.2
1,555,334	-		Sama_1268	0.38	-0.5
1,555,395	+		Sama_1268	0.40	-2.6
1,555,395	+		Sama_1268	0.40	-0.8
1,555,405	+		Sama_1268	0.41	-0.9
1,555,406	-		Sama_1268	0.41	-1.2
1,555,586	-		Sama_1268	0.46	-2.9
1,555,671	+		Sama_1268	0.49	+2.1
1,555,671	+		Sama_1268	0.49	-0.4
1,555,821	-		Sama_1268	0.54	+2.8
1,555,821	-		Sama_1268	0.54	-1.0
1,555,922	+		Sama_1268	0.57	-1.0
1,555,922	+		Sama_1268	0.57	-1.2
1,555,923	-		Sama_1268	0.57	-1.5
1,555,923	-		Sama_1268	0.57	+2.3
1,556,031	+		Sama_1268	0.61	+0.2
1,556,032	-		Sama_1268	0.61	+2.8
1,556,032	-		Sama_1268	0.61	-0.8
1,556,032	-		Sama_1268	0.61	+1.6
1,556,153	-		Sama_1268	0.65	-0.8
1,556,208	+		Sama_1268	0.67	-0.8
1,556,350	+		Sama_1268	0.71	-0.6
1,556,441	-		Sama_1268	0.74	-1.0
1,556,473	+		Sama_1268	0.75	-0.1
1,556,598	+		Sama_1268	0.79	-1.6
1,556,598	+		Sama_1268	0.79	-1.1
1,556,599	-		Sama_1268	0.79	-2.2
1,556,616	+		Sama_1268	0.80	-1.2
1,556,616	+		Sama_1268	0.80	+0.6
1,556,617	-		Sama_1268	0.80	-1.9
1,556,621	+		Sama_1268	0.80	-2.7
1,556,621	+		Sama_1268	0.80	-1.2
1,556,621	+		Sama_1268	0.80	-2.5
1,556,621	+		Sama_1268	0.80	+1.5
1,556,621	+		Sama_1268	0.80	-0.4
1,556,622	-		Sama_1268	0.80	-2.4
1,556,722	+		Sama_1268	0.84	+2.2
1,556,786	-		Sama_1268	0.86	-2.4
1,556,903	+		Sama_1268	0.89	+0.6
1,556,904	-		Sama_1268	0.89	-0.8
1,556,904	-		Sama_1268	0.89	-2.2
1,557,014	-				-1.0
1,557,016	+				-1.9
1,557,016	+				+1.2
1,557,034	+				+1.6
1,557,174	+				-2.1
1,557,174	+				-0.0
1,557,175	-				-1.4
1,557,175	-				-1.0
1,557,184	+				-3.0
1,557,219	+				+0.0
1,557,260	-				+1.1
1,557,345	+				+3.6
1,557,432	+				+0.5
1,557,434	+				+0.2
1,557,434	+				+2.3
1,557,443	+				+0.2
1,557,486	+				+0.2
1,557,488	+				-2.2
1,557,805	+		Sama_1269	0.24	-1.0