Strain Fitness in Shewanella amazonensis SB2B around Sama_1182

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
1,444,473	+		Sama_1181	0.51	-1.2
1,444,473	+		Sama_1181	0.51	-2.7
1,444,537	-		Sama_1181	0.56	+3.3
1,444,589	+		Sama_1181	0.60	-2.1
1,444,590	-		Sama_1181	0.60	-1.2
1,444,598	-		Sama_1181	0.61	+0.3
1,444,598	-		Sama_1181	0.61	+0.6
1,444,613	+		Sama_1181	0.62	-1.3
1,444,613	+		Sama_1181	0.62	-2.5
1,444,613	+		Sama_1181	0.62	-0.7
1,444,613	+		Sama_1181	0.62	+0.0
1,444,614	-		Sama_1181	0.62	+3.2
1,444,614	-		Sama_1181	0.62	-1.6
1,444,614	-		Sama_1181	0.62	+0.0
1,444,660	+		Sama_1181	0.66	-0.1
1,444,661	-		Sama_1181	0.66	-1.7
1,444,793	+		Sama_1181	0.76	-0.8
1,444,793	+		Sama_1181	0.76	+4.8
1,444,793	+		Sama_1181	0.76	+0.5
1,444,793	+		Sama_1181	0.76	+2.7
1,444,793	+		Sama_1181	0.76	-1.8
1,444,793	+		Sama_1181	0.76	-2.5
1,444,793	+		Sama_1181	0.76	+0.0
1,444,794	-		Sama_1181	0.76	+1.1
1,444,794	-		Sama_1181	0.76	-0.2
1,444,794	-		Sama_1181	0.76	-0.4
1,444,794	-		Sama_1181	0.76	+3.6
1,444,794	-		Sama_1181	0.76	+0.2
1,444,794	-		Sama_1181	0.76	+1.6
1,444,794	-		Sama_1181	0.76	-0.3
1,444,797	+		Sama_1181	0.76	-1.6
1,444,797	+		Sama_1181	0.76	-0.6
1,444,797	+		Sama_1181	0.76	-0.4
1,444,798	-		Sama_1181	0.76	-2.1
1,444,798	-		Sama_1181	0.76	+0.4
1,444,798	-		Sama_1181	0.76	+1.5
1,444,870	+		Sama_1181	0.81	-0.7
1,444,871	-		Sama_1181	0.82	+2.9
1,444,871	-		Sama_1181	0.82	+1.3
1,444,994	+				+1.9
1,444,994	+				-1.4
1,444,995	-				+1.6
1,444,995	-				+0.9
1,445,001	+				-1.0
1,445,117	-				-1.9
1,445,117	-				+2.0
1,445,137	-				+1.4
1,445,137	-				+0.6
1,445,171	+				-2.0
1,445,240	-				-1.0
1,445,248	+				-0.7
1,445,248	+				-0.9
1,445,248	+				+0.0
1,445,249	-				-1.0
1,445,249	-				-2.4
1,445,252	-				+4.6
1,445,312	-				+0.5
1,445,312	-				+0.8
1,445,355	+				+0.6
1,445,355	+				+3.6
1,445,356	-				-0.4
1,445,356	-				+3.0
1,445,358	+				-1.0
1,445,400	+				-0.5
1,445,400	+				-0.7
1,445,400	+				-0.7
1,445,401	-				-1.0
1,445,401	-				-1.0
1,445,405	-				+2.1
1,445,423	+				-0.7
1,445,437	+				+0.0
1,445,453	+				+0.2
1,445,453	+				+2.2
1,445,476	-				+0.0
1,445,514	-				-2.0
1,445,514	-				-1.0
1,445,527	+		Sama_1182	0.10	-1.2
1,445,527	+		Sama_1182	0.10	-2.2
1,445,555	-		Sama_1182	0.13	+2.5
1,445,678	+		Sama_1182	0.25	-0.7
1,445,679	-		Sama_1182	0.25	-1.4
1,445,761	+		Sama_1182	0.33	-0.4
1,445,761	+		Sama_1182	0.33	-0.2
1,445,762	-		Sama_1182	0.33	+0.6
1,445,762	-		Sama_1182	0.33	-0.7
1,445,762	-		Sama_1182	0.33	-1.9
1,445,762	-		Sama_1182	0.33	+1.4
1,445,765	+		Sama_1182	0.33	+0.0
1,445,765	+		Sama_1182	0.33	-1.4
1,445,765	+		Sama_1182	0.33	-1.4
1,445,766	-		Sama_1182	0.33	+0.0
1,445,793	+		Sama_1182	0.36	+0.0
1,445,794	-		Sama_1182	0.36	+1.3
1,445,794	-		Sama_1182	0.36	-1.6
1,445,814	+		Sama_1182	0.38	-2.3
1,445,815	-		Sama_1182	0.38	-1.9
1,445,815	-		Sama_1182	0.38	-1.2
1,445,924	-		Sama_1182	0.48	+0.3
1,446,068	+		Sama_1182	0.62	+0.0
1,446,131	-		Sama_1182	0.68	+0.1
1,446,162	+		Sama_1182	0.71	-0.4
1,446,424	-				-0.7
1,446,424	-				-1.7
1,446,471	+				-0.7
1,446,471	+				+0.3
1,446,472	-				+1.2
1,446,477	+				-1.0
1,446,535	-				-0.4
1,446,537	+				-0.4
1,446,626	-		Sama_1183	0.17	-2.3
1,446,662	-		Sama_1183	0.21	+0.6
1,446,686	+		Sama_1183	0.24	-0.6
1,446,686	+		Sama_1183	0.24	-1.6
1,446,686	+		Sama_1183	0.24	-0.7
1,446,686	+		Sama_1183	0.24	-1.2
1,446,686	+		Sama_1183	0.24	-1.0
1,446,687	-		Sama_1183	0.24	-1.0
1,446,687	-		Sama_1183	0.24	-0.4
1,446,730	+		Sama_1183	0.28	-1.7
1,446,731	-		Sama_1183	0.28	+0.0
1,446,731	-		Sama_1183	0.28	-1.9
1,446,750	-		Sama_1183	0.30	-0.7
1,446,853	+		Sama_1183	0.41	-0.6
1,446,936	+		Sama_1183	0.50	+1.6
1,446,936	+		Sama_1183	0.50	-1.2
1,447,033	-		Sama_1183	0.61	-2.1
1,447,033	-		Sama_1183	0.61	-1.2
1,447,090	-		Sama_1183	0.67	-0.5
1,447,090	-		Sama_1183	0.67	+0.4
1,447,116	+		Sama_1183	0.70	-0.3
1,447,253	+		Sama_1183	0.84	-0.2
1,447,253	+		Sama_1183	0.84	+0.0
1,447,309	+				+0.0
1,447,309	+				-1.7
1,447,309	+				+0.0
1,447,309	+				-1.2