Strain Fitness in Shewanella amazonensis SB2B around Sama_1177

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
1,437,040	+		Sama_1175	0.85	+2.6
1,437,040	+		Sama_1175	0.85	-1.2
1,437,040	+		Sama_1175	0.85	+3.8
1,437,041	-		Sama_1175	0.85	+4.7
1,437,041	-		Sama_1175	0.85	+0.7
1,437,041	-		Sama_1175	0.85	-0.7
1,437,041	-		Sama_1175	0.85	-0.7
1,437,041	-		Sama_1175	0.85	-1.0
1,437,041	-		Sama_1175	0.85	+0.0
1,437,117	-		Sama_1175	0.89	+0.0
1,437,138	-		Sama_1175	0.90	-0.8
1,437,142	+		Sama_1175	0.90	-0.7
1,437,142	+		Sama_1175	0.90	+0.6
1,437,143	-				+0.3
1,437,224	+				-1.4
1,437,224	+				-1.9
1,437,224	+				-0.7
1,437,224	+				+0.2
1,437,224	+				+1.3
1,437,225	-				+0.6
1,437,225	-				-1.5
1,437,225	-				-1.0
1,437,225	-				+0.6
1,437,239	+				+1.3
1,437,239	+				+2.3
1,437,239	+				-0.4
1,437,270	+				-2.1
1,437,270	+				-4.0
1,437,279	-				+2.4
1,437,296	+				-1.0
1,437,296	+				-1.0
1,437,297	-				+0.4
1,437,307	-				+4.5
1,437,307	-				+0.3
1,437,307	-				-0.7
1,437,374	+				-1.0
1,437,374	+				-1.4
1,437,375	-				-0.5
1,437,375	-				-0.2
1,437,390	+				-1.9
1,437,390	+				-0.7
1,437,390	+				+1.0
1,437,391	-				+0.2
1,437,398	-				-0.1
1,437,398	-				-0.2
1,437,409	+				-1.6
1,437,435	+				+3.6
1,437,503	+		Sama_1176	0.26	-1.6
1,437,504	-		Sama_1176	0.26	+2.3
1,437,538	+		Sama_1176	0.36	+0.4
1,437,583	+		Sama_1176	0.48	-1.3
1,437,595	+		Sama_1176	0.52	-0.3
1,437,595	+		Sama_1176	0.52	+1.0
1,437,596	-		Sama_1176	0.52	-2.5
1,437,613	+		Sama_1176	0.57	+3.2
1,437,635	+		Sama_1176	0.63	+2.6
1,437,646	+		Sama_1176	0.66	-0.7
1,437,646	+		Sama_1176	0.66	+3.4
1,437,673	+		Sama_1176	0.74	-2.8
1,437,673	+		Sama_1176	0.74	+2.7
1,437,673	+		Sama_1176	0.74	-0.6
1,437,674	-		Sama_1176	0.74	-0.4
1,437,719	+		Sama_1176	0.87	+0.2
1,437,719	+		Sama_1176	0.87	+0.6
1,437,719	+		Sama_1176	0.87	-1.7
1,437,719	+		Sama_1176	0.87	+0.6
1,437,719	+		Sama_1176	0.87	+1.9
1,437,719	+		Sama_1176	0.87	-1.2
1,437,720	-		Sama_1176	0.87	-0.4
1,437,720	-		Sama_1176	0.87	+0.0
1,437,720	-		Sama_1176	0.87	-1.2
1,437,739	+				+4.0
1,437,739	+				+2.2
1,437,758	-				-0.7
1,437,764	+				+1.9
1,437,764	+				+1.0
1,437,764	+				-0.5
1,437,841	+				+0.9
1,437,841	+				-0.7
1,437,884	+				+0.9
1,437,886	+				-0.9
1,437,886	+				-2.0
1,437,887	-				-0.9
1,437,908	+				-0.5
1,437,909	-				-1.6
1,437,929	+				-2.0
1,437,944	+				-0.6
1,437,944	+				-0.6
1,437,944	+				-1.7
1,437,944	+				-0.2
1,437,944	+				+0.9
1,437,945	-				+1.3
1,437,945	-				+0.0
1,437,971	+				+2.3
1,438,014	+				+2.2
1,438,014	+				-2.5
1,438,014	+				+0.4
1,438,014	+				-1.3
1,438,014	+				+5.1
1,438,015	-				+0.6
1,438,015	-				-2.3
1,438,015	-				+1.9
1,438,015	-				-2.7
1,438,020	-				-1.5
1,438,038	+				-1.0
1,438,043	+				+0.3
1,438,044	-				+1.0
1,438,114	-		Sama_1177	0.12	-0.6
1,438,114	-		Sama_1177	0.12	+3.8
1,438,114	-		Sama_1177	0.12	-0.7
1,438,114	-		Sama_1177	0.12	-1.5
1,438,232	+		Sama_1177	0.20	-1.6
1,438,232	+		Sama_1177	0.20	-1.7
1,438,266	-		Sama_1177	0.22	-1.9
1,438,365	+		Sama_1177	0.29	+2.2
1,438,365	+		Sama_1177	0.29	-1.6
1,438,365	+		Sama_1177	0.29	-0.4
1,438,365	+		Sama_1177	0.29	+1.7
1,438,365	+		Sama_1177	0.29	-0.7
1,438,365	+		Sama_1177	0.29	+2.0
1,438,365	+		Sama_1177	0.29	+2.3
1,438,365	+		Sama_1177	0.29	+1.7
1,438,366	-		Sama_1177	0.29	+0.0
1,438,366	-		Sama_1177	0.29	-0.7
1,438,366	-		Sama_1177	0.29	+0.0
1,438,366	-		Sama_1177	0.29	-0.7
1,438,366	-		Sama_1177	0.29	-0.7
1,438,368	+		Sama_1177	0.29	+0.4
1,438,368	+		Sama_1177	0.29	-2.3
1,438,369	-		Sama_1177	0.29	+0.0
1,438,369	-		Sama_1177	0.29	+4.3
1,438,369	-		Sama_1177	0.29	-2.1
1,438,369	-		Sama_1177	0.29	-1.2
1,438,369	-		Sama_1177	0.29	+1.6
1,438,369	-		Sama_1177	0.29	+1.6
1,438,369	-		Sama_1177	0.29	-1.2
1,438,369	-		Sama_1177	0.29	-1.9
1,438,369	-		Sama_1177	0.29	-0.4
1,438,384	+		Sama_1177	0.30	+0.8
1,438,385	-		Sama_1177	0.30	+2.6
1,438,385	-		Sama_1177	0.30	-1.2
1,438,385	-		Sama_1177	0.30	+0.8
1,438,421	+		Sama_1177	0.32	-0.2
1,438,422	-		Sama_1177	0.32	+0.3
1,438,428	+		Sama_1177	0.33	+3.4
1,438,429	-		Sama_1177	0.33	-0.7
1,438,429	-		Sama_1177	0.33	+1.0
1,438,429	-		Sama_1177	0.33	-2.3
1,438,443	+		Sama_1177	0.34	+1.6
1,438,443	+		Sama_1177	0.34	-1.6
1,438,443	+		Sama_1177	0.34	-0.3
1,438,443	+		Sama_1177	0.34	+3.4
1,438,443	+		Sama_1177	0.34	+1.6
1,438,443	+		Sama_1177	0.34	-1.3
1,438,443	+		Sama_1177	0.34	+2.2
1,438,443	+		Sama_1177	0.34	+0.6
1,438,443	+		Sama_1177	0.34	+0.0
1,438,444	-		Sama_1177	0.34	+2.1
1,438,444	-		Sama_1177	0.34	-1.3
1,438,444	-		Sama_1177	0.34	-0.4
1,438,444	-		Sama_1177	0.34	+0.0
1,438,444	-		Sama_1177	0.34	+4.4
1,438,515	+		Sama_1177	0.38	+0.1
1,438,515	+		Sama_1177	0.38	-1.2
1,438,515	+		Sama_1177	0.38	+0.0
1,438,515	+		Sama_1177	0.38	-0.8
1,438,516	-		Sama_1177	0.39	-1.2
1,438,516	-		Sama_1177	0.39	-0.7
1,438,516	-		Sama_1177	0.39	-0.5
1,438,516	-		Sama_1177	0.39	-1.3
1,438,516	-		Sama_1177	0.39	-2.1
1,438,516	-		Sama_1177	0.39	+3.3
1,438,516	-		Sama_1177	0.39	-0.7
1,438,516	-		Sama_1177	0.39	-0.1
1,438,516	-		Sama_1177	0.39	+2.0
1,438,532	+		Sama_1177	0.40	-1.6
1,438,532	+		Sama_1177	0.40	+1.1
1,438,545	+		Sama_1177	0.40	+2.0
1,438,545	+		Sama_1177	0.40	-1.7
1,438,546	-		Sama_1177	0.40	-3.2
1,438,546	-		Sama_1177	0.40	+3.3
1,438,546	-		Sama_1177	0.40	-1.7
1,438,546	-		Sama_1177	0.40	+0.0
1,438,546	-		Sama_1177	0.40	-0.1
1,438,597	+		Sama_1177	0.44	-1.4
1,438,597	+		Sama_1177	0.44	+0.9
1,438,666	+		Sama_1177	0.48	+1.6
1,438,667	-		Sama_1177	0.48	+0.0
1,438,766	-		Sama_1177	0.55	-0.4
1,438,793	+		Sama_1177	0.57	+2.2
1,438,800	+		Sama_1177	0.57	+1.7
1,438,800	+		Sama_1177	0.57	-1.0
1,438,936	+		Sama_1177	0.66	+0.0
1,438,937	-		Sama_1177	0.66	-0.7
1,438,960	-		Sama_1177	0.68	+1.2
1,438,988	+		Sama_1177	0.70	-2.1
1,438,988	+		Sama_1177	0.70	+1.4
1,438,988	+		Sama_1177	0.70	-1.7
1,438,989	-		Sama_1177	0.70	-1.9
1,438,989	-		Sama_1177	0.70	-1.1
1,439,045	+		Sama_1177	0.73	-0.4
1,439,049	+		Sama_1177	0.74	+0.1
1,439,049	+		Sama_1177	0.74	+2.7
1,439,049	+		Sama_1177	0.74	-1.5
1,439,050	-		Sama_1177	0.74	-1.6
1,439,112	+		Sama_1177	0.78	-1.6
1,439,121	+		Sama_1177	0.78	-2.0
1,439,175	+		Sama_1177	0.82	-1.4
1,439,175	+		Sama_1177	0.82	-1.2
1,439,175	+		Sama_1177	0.82	+1.2
1,439,175	+		Sama_1177	0.82	-0.8
1,439,176	-		Sama_1177	0.82	-2.5
1,439,201	+		Sama_1177	0.84	+2.4
1,439,215	-		Sama_1177	0.84	-0.6
1,439,215	-		Sama_1177	0.84	-0.7
1,439,231	+		Sama_1177	0.86	+1.6
1,439,232	-		Sama_1177	0.86	+0.6
1,439,241	+		Sama_1177	0.86	-0.6
1,439,242	-		Sama_1177	0.86	-1.6
1,439,288	+		Sama_1177	0.89	-1.5
1,439,288	+		Sama_1177	0.89	-1.5
1,439,288	+		Sama_1177	0.89	+1.8
1,439,316	+				-1.9
1,439,316	+				+3.2
1,439,317	-				+0.0
1,439,318	+				-0.4
1,439,318	+				-0.4
1,439,318	+				+0.9
1,439,331	-				-1.3
1,439,492	+				-1.1
1,439,492	+				-1.9
1,439,492	+				-1.3
1,439,492	+				-1.3
1,439,492	+				+2.3
1,439,492	+				-0.6
1,439,493	-				+0.6
1,439,493	-				-1.0
1,439,493	-				-1.7
1,439,493	-				+2.9
1,439,493	-				-2.3
1,439,493	-				+1.2
1,439,493	-				-2.7
1,439,530	+				-1.6
1,439,556	+				+0.9
1,439,556	+				-0.4
1,439,556	+				+1.2
1,439,556	+				-1.2
1,439,557	-				-1.6
1,439,566	+				+1.2
1,439,581	-				+0.7
1,439,587	+				+1.3
1,439,588	-				-1.9
1,439,588	-				-1.4
1,439,588	-				+0.1
1,439,596	+				-1.3
1,439,782	+		Sama_1178	0.33	+3.6
1,439,796	+		Sama_1178	0.35	+3.6
1,439,797	-		Sama_1178	0.35	-1.1
1,439,797	-		Sama_1178	0.35	+1.8
1,439,797	-		Sama_1178	0.35	-0.4
1,439,797	-		Sama_1178	0.35	-0.2
1,439,850	+		Sama_1178	0.43	+0.0
1,439,850	+		Sama_1178	0.43	-1.4
1,439,877	+		Sama_1178	0.47	-2.1
1,439,878	-		Sama_1178	0.47	-0.4
1,439,955	+		Sama_1178	0.57	+4.9
1,439,955	+		Sama_1178	0.57	-1.2
1,439,955	+		Sama_1178	0.57	-2.2
1,439,960	+		Sama_1178	0.58	+2.3
1,439,960	+		Sama_1178	0.58	+2.9
1,439,960	+		Sama_1178	0.58	-1.9
1,439,961	-		Sama_1178	0.58	-0.7
1,439,976	+		Sama_1178	0.60	+1.2
1,439,976	+		Sama_1178	0.60	-1.4
1,439,977	-		Sama_1178	0.61	-1.4
1,439,977	-		Sama_1178	0.61	-1.6
1,439,977	-		Sama_1178	0.61	+0.0
1,439,987	+		Sama_1178	0.62	+2.1
1,440,026	+		Sama_1178	0.67	-2.0
1,440,027	-		Sama_1178	0.68	+0.2
1,440,147	+		Sama_1178	0.84	+1.8
1,440,257	+				-2.4
1,440,257	+				-1.1
1,440,257	+				-1.0
1,440,257	+				-0.9
1,440,258	-				-2.4
1,440,258	-				-0.6
1,440,258	-				-2.3
1,440,258	-				+1.0
1,440,334	+		Sama_1179	0.26	-1.2
1,440,433	+		Sama_1179	0.68	+0.7
1,440,433	+		Sama_1179	0.68	-2.2