Strain Fitness in Shewanella amazonensis SB2B around Sama_1101

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
1,324,015	-		Sama_1099	0.47	+0.9
1,324,015	-		Sama_1099	0.47	-1.1
1,324,073	+		Sama_1099	0.54	+0.2
1,324,091	+		Sama_1099	0.56	+1.4
1,324,091	+		Sama_1099	0.56	+0.6
1,324,091	+		Sama_1099	0.56	-2.3
1,324,091	+		Sama_1099	0.56	+4.4
1,324,092	-		Sama_1099	0.56	-2.8
1,324,092	-		Sama_1099	0.56	+0.0
1,324,121	+		Sama_1099	0.59	-0.4
1,324,121	+		Sama_1099	0.59	+0.9
1,324,122	-		Sama_1099	0.59	+2.8
1,324,122	-		Sama_1099	0.59	-3.1
1,324,122	-		Sama_1099	0.59	-1.4
1,324,171	+		Sama_1099	0.65	-1.0
1,324,172	-		Sama_1099	0.65	+0.2
1,324,172	-		Sama_1099	0.65	-1.0
1,324,265	+		Sama_1099	0.75	-2.0
1,324,266	-		Sama_1099	0.76	+5.8
1,324,266	-		Sama_1099	0.76	+2.9
1,324,274	+		Sama_1099	0.76	+2.2
1,324,378	+		Sama_1099	0.88	+0.5
1,324,379	-		Sama_1099	0.88	+3.0
1,324,481	+				+0.4
1,324,481	+				+2.9
1,324,481	+				+1.9
1,324,481	+				-2.5
1,324,481	+				-0.8
1,324,482	-				-0.1
1,324,482	-				-2.6
1,324,482	-				+0.0
1,324,491	+				-0.5
1,324,650	+		Sama_1100	0.40	+4.8
1,324,663	-		Sama_1100	0.43	+1.1
1,324,669	-		Sama_1100	0.44	-1.0
1,324,873	+				+2.1
1,324,873	+				+1.2
1,324,874	-				-1.8
1,324,874	-				+2.4
1,324,874	-				-1.0
1,324,874	-				+0.6
1,324,874	-				-2.2
1,324,874	-				-2.9
1,324,909	-				-1.8
1,324,909	-				+0.8
1,324,937	+				-1.0
1,324,938	-				-1.6
1,324,938	-				+0.2
1,325,149	-		Sama_1101	0.11	-2.1
1,325,149	-		Sama_1101	0.11	+1.6
1,325,149	-		Sama_1101	0.11	+1.4
1,325,165	+		Sama_1101	0.12	+0.2
1,325,255	+		Sama_1101	0.18	-0.9
1,325,277	-		Sama_1101	0.19	+0.6
1,325,303	+		Sama_1101	0.21	-0.5
1,325,304	-		Sama_1101	0.21	-1.4
1,325,318	-		Sama_1101	0.22	+1.5
1,325,326	+		Sama_1101	0.22	-0.7
1,325,326	+		Sama_1101	0.22	+2.5
1,325,382	+		Sama_1101	0.26	-1.7
1,325,397	+		Sama_1101	0.27	-2.1
1,325,397	+		Sama_1101	0.27	-1.2
1,325,398	-		Sama_1101	0.27	+0.0
1,325,398	-		Sama_1101	0.27	-2.5
1,325,499	+		Sama_1101	0.33	-2.6
1,325,499	+		Sama_1101	0.33	-0.8
1,325,499	+		Sama_1101	0.33	-1.0
1,325,499	+		Sama_1101	0.33	-2.9
1,325,499	+		Sama_1101	0.33	-0.7
1,325,500	-		Sama_1101	0.33	-0.2
1,325,502	+		Sama_1101	0.33	-1.7
1,325,502	+		Sama_1101	0.33	-0.7
1,325,517	+		Sama_1101	0.34	-0.8
1,325,517	+		Sama_1101	0.34	-1.2
1,325,517	+		Sama_1101	0.34	-0.4
1,325,517	+		Sama_1101	0.34	+0.4
1,325,517	+		Sama_1101	0.34	-0.1
1,325,518	-		Sama_1101	0.34	-1.0
1,325,618	+		Sama_1101	0.41	+3.6
1,325,619	-		Sama_1101	0.41	+1.3
1,325,619	-		Sama_1101	0.41	-0.7
1,325,619	-		Sama_1101	0.41	-0.7
1,325,619	-		Sama_1101	0.41	-0.3
1,325,619	-		Sama_1101	0.41	-1.7
1,325,652	-		Sama_1101	0.43	+2.3
1,325,813	+		Sama_1101	0.53	-0.7
1,325,813	+		Sama_1101	0.53	+3.4
1,325,814	-		Sama_1101	0.53	-2.5
1,325,820	-		Sama_1101	0.53	-2.1
1,325,820	-		Sama_1101	0.53	+0.6
1,325,820	-		Sama_1101	0.53	-1.7
1,326,009	+		Sama_1101	0.65	+0.3
1,326,009	+		Sama_1101	0.65	-1.2
1,326,009	+		Sama_1101	0.65	-1.0
1,326,009	+		Sama_1101	0.65	-0.5
1,326,009	+		Sama_1101	0.65	-2.3
1,326,009	+		Sama_1101	0.65	-1.8
1,326,009	+		Sama_1101	0.65	-2.5
1,326,010	-		Sama_1101	0.65	-1.1
1,326,010	-		Sama_1101	0.65	-1.2
1,326,010	-		Sama_1101	0.65	+2.7
1,326,010	-		Sama_1101	0.65	-3.2
1,326,100	-		Sama_1101	0.71	+0.6
1,326,100	-		Sama_1101	0.71	-1.0
1,326,131	+		Sama_1101	0.73	+2.2
1,326,131	+		Sama_1101	0.73	-0.7
1,326,131	+		Sama_1101	0.73	+1.5
1,326,131	+		Sama_1101	0.73	-0.4
1,326,131	+		Sama_1101	0.73	+0.0
1,326,132	-		Sama_1101	0.73	-1.2
1,326,132	-		Sama_1101	0.73	-1.0
1,326,132	-		Sama_1101	0.73	+0.0
1,326,132	-		Sama_1101	0.73	-0.1
1,326,132	-		Sama_1101	0.73	-1.1
1,326,132	-		Sama_1101	0.73	-0.1
1,326,132	-		Sama_1101	0.73	+0.2
1,326,132	-		Sama_1101	0.73	+2.1
1,326,132	-		Sama_1101	0.73	-0.4
1,326,132	-		Sama_1101	0.73	-0.4
1,326,132	-		Sama_1101	0.73	-1.2
1,326,132	-		Sama_1101	0.73	+2.9
1,326,186	+		Sama_1101	0.76	-1.0
1,326,186	+		Sama_1101	0.76	-1.6
1,326,186	+		Sama_1101	0.76	+0.0
1,326,186	+		Sama_1101	0.76	+0.2
1,326,186	+		Sama_1101	0.76	+1.2
1,326,187	-		Sama_1101	0.76	-2.9
1,326,187	-		Sama_1101	0.76	+0.4
1,326,187	-		Sama_1101	0.76	+1.6
1,326,190	+		Sama_1101	0.76	-1.4
1,326,190	+		Sama_1101	0.76	+0.2
1,326,190	+		Sama_1101	0.76	-0.7
1,326,190	+		Sama_1101	0.76	-1.0
1,326,190	+		Sama_1101	0.76	-0.6
1,326,191	-		Sama_1101	0.77	-1.2
1,326,191	-		Sama_1101	0.77	+3.4
1,326,191	-		Sama_1101	0.77	-1.0
1,326,227	+		Sama_1101	0.79	+1.6
1,326,227	+		Sama_1101	0.79	-0.4
1,326,227	+		Sama_1101	0.79	+1.3
1,326,228	-		Sama_1101	0.79	-1.1
1,326,353	+		Sama_1101	0.87	+0.1
1,326,354	-		Sama_1101	0.87	+0.5
1,326,381	+		Sama_1101	0.88	+1.7
1,326,381	+		Sama_1101	0.88	+2.5
1,326,381	+		Sama_1101	0.88	+1.2
1,326,382	-		Sama_1101	0.89	-1.8
1,326,396	+		Sama_1101	0.89	+1.1
1,326,396	+		Sama_1101	0.89	-1.0
1,326,396	+		Sama_1101	0.89	+0.6
1,326,396	+		Sama_1101	0.89	+1.4
1,326,397	-		Sama_1101	0.89	-1.2
1,326,397	-		Sama_1101	0.89	-0.6
1,326,417	+				-1.6
1,326,417	+				+2.4
1,326,445	+				-1.4
1,326,445	+				+1.5
1,326,445	+				-2.1
1,326,445	+				+1.0
1,326,446	-				+1.6
1,326,446	-				-2.1
1,326,458	+				-1.7
1,326,458	+				+2.6
1,326,458	+				-0.4
1,326,459	-				-1.6
1,326,622	+				-1.0
1,326,622	+				-0.0
1,326,622	+				+0.6
1,326,622	+				-1.0
1,326,623	-				-1.0
1,326,623	-				+2.3
1,326,623	-				-1.4
1,326,623	-				+0.0
1,326,642	+				-0.1
1,326,642	+				+1.0
1,326,642	+				-2.3
1,326,656	+				+2.4
1,326,657	-				-0.2
1,326,712	+				-2.1
1,326,712	+				-0.7
1,326,713	-				-0.1
1,326,713	-				+1.2
1,326,713	-				+0.8
1,326,782	+				-2.8
1,326,782	+				-0.7
1,326,782	+				-1.6
1,326,782	+				+3.1
1,326,782	+				-1.3
1,326,782	+				+2.9
1,326,782	+				+0.9
1,326,782	+				+3.5
1,326,783	-				+0.6
1,326,783	-				+2.9
1,326,783	-				+0.1
1,326,783	-				-1.7
1,326,783	-				+1.0
1,326,783	-				-1.5
1,326,825	+				-1.4
1,326,825	+				-0.4
1,326,825	+				-0.7
1,326,825	+				-1.8
1,326,826	-				+1.2
1,326,826	-				+1.8
1,326,826	-				-0.7
1,326,868	-				+0.0
1,326,878	-				-1.6
1,326,878	-				+1.6
1,326,878	-				-1.3
1,326,932	+				+2.8
1,326,933	-				+2.9
1,326,933	-				+2.6
1,326,933	-				-0.7
1,326,974	+				-0.8
1,326,974	+				-2.0
1,326,974	+				-1.0
1,326,975	-				-2.0
1,326,975	-				+1.0
1,327,141	-				-1.4
1,327,141	-				+2.1
1,327,164	+				-1.7
1,327,164	+				+0.2
1,327,164	+				-2.6
1,327,164	+				-1.7
1,327,164	+				-2.0
1,327,164	+				+1.8
1,327,165	-				-1.7
1,327,165	-				-0.4
1,327,165	-				-0.7
1,327,165	-				-0.7
1,327,165	-				-1.3
1,327,217	+				+0.3
1,327,217	+				-1.0
1,327,217	+				-1.9
1,327,217	+				-1.7
1,327,217	+				-2.6
1,327,217	+				+1.3
1,327,218	-				+0.0
1,327,218	-				-1.4
1,327,259	+				+2.3
1,327,259	+				+0.0
1,327,259	+				-0.7
1,327,260	-				-1.8
1,327,260	-				+0.6
1,327,269	+				+2.7
1,327,269	+				-2.0
1,327,269	+				-0.7
1,327,269	+				+1.0
1,327,273	+				+0.0
1,327,273	+				+0.3
1,327,274	-				-2.6
1,327,274	-				+2.3
1,327,274	-				-1.2
1,327,274	-				-0.7
1,327,274	-				-2.0
1,327,278	+				+1.7
1,327,279	-				+3.1
1,327,322	+				+0.4
1,327,453	-				-0.4