Strain Fitness in Shewanella amazonensis SB2B around Sama_1082

Experiment: Cisplatin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.01 mg/ml
1,308,736	+		Sama_1081	0.29	+4.7
1,308,736	+		Sama_1081	0.29	+1.5
1,308,736	+		Sama_1081	0.29	+1.2
1,308,737	-		Sama_1081	0.30	-1.4
1,308,737	-		Sama_1081	0.30	+1.0
1,308,737	-		Sama_1081	0.30	+0.6
1,308,737	-		Sama_1081	0.30	+0.3
1,308,737	-		Sama_1081	0.30	-1.3
1,308,737	-		Sama_1081	0.30	+0.9
1,308,738	+		Sama_1081	0.30	+5.5
1,308,739	-		Sama_1081	0.30	+0.3
1,308,761	+		Sama_1081	0.31	+2.8
1,308,762	-		Sama_1081	0.31	+2.3
1,308,762	-		Sama_1081	0.31	+3.3
1,308,762	-		Sama_1081	0.31	+0.6
1,308,762	-		Sama_1081	0.31	-0.7
1,308,798	+		Sama_1081	0.34	-0.9
1,308,798	+		Sama_1081	0.34	+0.1
1,308,799	-		Sama_1081	0.34	-0.7
1,308,799	-		Sama_1081	0.34	+0.0
1,308,799	-		Sama_1081	0.34	-1.4
1,308,799	-		Sama_1081	0.34	+1.8
1,308,812	+		Sama_1081	0.35	+0.1
1,308,812	+		Sama_1081	0.35	-1.2
1,308,812	+		Sama_1081	0.35	-1.6
1,308,812	+		Sama_1081	0.35	+0.6
1,308,812	+		Sama_1081	0.35	+0.6
1,308,813	-		Sama_1081	0.35	+2.5
1,308,813	-		Sama_1081	0.35	+0.3
1,308,813	-		Sama_1081	0.35	+2.5
1,308,813	-		Sama_1081	0.35	+0.0
1,308,813	-		Sama_1081	0.35	-2.8
1,308,813	-		Sama_1081	0.35	+4.7
1,308,813	-		Sama_1081	0.35	+2.3
1,308,813	-		Sama_1081	0.35	+0.3
1,308,813	-		Sama_1081	0.35	+2.6
1,308,855	+		Sama_1081	0.38	-1.4
1,308,855	+		Sama_1081	0.38	+0.9
1,308,856	-		Sama_1081	0.38	-0.8
1,308,856	-		Sama_1081	0.38	-1.1
1,308,920	+		Sama_1081	0.43	+1.7
1,308,920	+		Sama_1081	0.43	+0.6
1,308,920	+		Sama_1081	0.43	+1.1
1,308,921	-		Sama_1081	0.43	+1.5
1,308,921	-		Sama_1081	0.43	-0.4
1,308,931	-		Sama_1081	0.44	+0.0
1,309,027	-		Sama_1081	0.51	+1.4
1,309,027	-		Sama_1081	0.51	-0.7
1,309,120	+		Sama_1081	0.58	+1.9
1,309,120	+		Sama_1081	0.58	-2.9
1,309,120	+		Sama_1081	0.58	-0.6
1,309,120	+		Sama_1081	0.58	-2.1
1,309,120	+		Sama_1081	0.58	+3.8
1,309,120	+		Sama_1081	0.58	+1.4
1,309,120	+		Sama_1081	0.58	-0.2
1,309,121	-		Sama_1081	0.58	+3.9
1,309,150	-		Sama_1081	0.60	+1.0
1,309,182	+		Sama_1081	0.62	+5.4
1,309,218	+		Sama_1081	0.65	-0.2
1,309,221	+		Sama_1081	0.65	+2.3
1,309,221	+		Sama_1081	0.65	-1.0
1,309,222	-		Sama_1081	0.65	+1.3
1,309,304	+		Sama_1081	0.71	+1.6
1,309,304	+		Sama_1081	0.71	+0.6
1,309,304	+		Sama_1081	0.71	-1.7
1,309,304	+		Sama_1081	0.71	+4.9
1,309,312	-		Sama_1081	0.72	+4.7
1,309,312	-		Sama_1081	0.72	+3.1
1,309,316	+		Sama_1081	0.72	+3.7
1,309,316	+		Sama_1081	0.72	+0.8
1,309,317	-		Sama_1081	0.72	-0.4
1,309,317	-		Sama_1081	0.72	+2.2
1,309,433	+		Sama_1081	0.81	+4.6
1,309,433	+		Sama_1081	0.81	-0.3
1,309,433	+		Sama_1081	0.81	+1.5
1,309,433	+		Sama_1081	0.81	-1.0
1,309,433	+		Sama_1081	0.81	+1.7
1,309,433	+		Sama_1081	0.81	+3.0
1,309,434	-		Sama_1081	0.81	+0.5
1,309,434	-		Sama_1081	0.81	+3.1
1,309,468	-		Sama_1081	0.83	+4.3
1,309,469	+		Sama_1081	0.83	+0.5
1,309,469	+		Sama_1081	0.83	-2.0
1,309,469	+		Sama_1081	0.83	-1.2
1,309,469	+		Sama_1081	0.83	-0.7
1,309,470	-		Sama_1081	0.83	-1.3
1,309,470	-		Sama_1081	0.83	+2.1
1,309,542	+		Sama_1081	0.88	+0.0
1,309,542	+		Sama_1081	0.88	-1.8
1,309,543	-		Sama_1081	0.89	-2.2
1,309,543	-		Sama_1081	0.89	+3.9
1,309,574	+				+1.3
1,309,685	+				-0.4
1,309,685	+				+2.3
1,309,685	+				+1.7
1,309,685	+				-0.1
1,309,686	-				-1.4
1,309,686	-				-0.9
1,309,686	-				+0.4
1,309,778	+		Sama_1082	0.16	+2.5
1,309,778	+		Sama_1082	0.16	-2.0
1,309,872	-		Sama_1082	0.34	-0.2
1,309,900	+		Sama_1082	0.39	-1.4
1,309,900	+		Sama_1082	0.39	-1.4
1,309,900	+		Sama_1082	0.39	-0.5
1,309,901	-		Sama_1082	0.39	-1.8
1,309,994	-		Sama_1082	0.57	+2.6
1,310,013	+		Sama_1082	0.61	-2.7
1,310,047	+		Sama_1082	0.67	-0.8
1,310,048	-		Sama_1082	0.67	-0.4
1,310,048	-		Sama_1082	0.67	+0.8
1,310,070	+		Sama_1082	0.71	-1.2
1,310,079	+		Sama_1082	0.73	-2.3
1,310,079	+		Sama_1082	0.73	+0.4
1,310,087	+		Sama_1082	0.75	+3.0
1,310,105	+		Sama_1082	0.78	-0.6
1,310,118	+		Sama_1082	0.81	-1.4
1,310,118	+		Sama_1082	0.81	-0.8
1,310,118	+		Sama_1082	0.81	-0.2
1,310,118	+		Sama_1082	0.81	-0.8
1,310,119	-		Sama_1082	0.81	+2.7
1,310,119	-		Sama_1082	0.81	-2.4
1,310,119	-		Sama_1082	0.81	-0.2
1,310,159	-		Sama_1082	0.88	-0.4
1,310,173	+				-0.7
1,310,173	+				+3.2
1,310,174	-				-0.4
1,310,289	+		Sama_1083	0.11	+2.8
1,310,290	-		Sama_1083	0.11	+0.0
1,310,290	-		Sama_1083	0.11	+1.2
1,310,293	+		Sama_1083	0.12	-0.4
1,310,293	+		Sama_1083	0.12	-0.8
1,310,294	-		Sama_1083	0.12	+1.1
1,310,294	-		Sama_1083	0.12	-1.0
1,310,294	-		Sama_1083	0.12	-1.4
1,310,303	-		Sama_1083	0.13	+0.5
1,310,303	-		Sama_1083	0.13	-0.2
1,310,366	+		Sama_1083	0.20	+2.3
1,310,405	+		Sama_1083	0.25	-1.2
1,310,423	+		Sama_1083	0.27	+0.4
1,310,424	-		Sama_1083	0.27	+3.1
1,310,424	-		Sama_1083	0.27	+0.8
1,310,439	-		Sama_1083	0.28	+0.2
1,310,439	-		Sama_1083	0.28	+0.6
1,310,458	-		Sama_1083	0.31	-0.2
1,310,579	+		Sama_1083	0.44	-0.3
1,310,587	+		Sama_1083	0.45	+2.7
1,310,614	-		Sama_1083	0.48	-0.7
1,310,614	-		Sama_1083	0.48	+1.9
1,310,642	+		Sama_1083	0.52	+1.4
1,310,668	+		Sama_1083	0.55	-2.5
1,310,668	+		Sama_1083	0.55	-2.1
1,310,668	+		Sama_1083	0.55	-3.0
1,310,669	-		Sama_1083	0.55	+3.0
1,310,722	+		Sama_1083	0.61	-1.4
1,310,722	+		Sama_1083	0.61	-2.1
1,310,722	+		Sama_1083	0.61	+3.5
1,310,722	+		Sama_1083	0.61	+0.2
1,310,723	-		Sama_1083	0.61	+0.1
1,310,723	-		Sama_1083	0.61	-0.7
1,310,723	-		Sama_1083	0.61	-0.6
1,310,777	+		Sama_1083	0.67	+0.8
1,310,777	+		Sama_1083	0.67	+1.2
1,310,778	-		Sama_1083	0.67	-0.7
1,310,778	-		Sama_1083	0.67	+1.1
1,310,778	-		Sama_1083	0.67	-0.4
1,310,778	-		Sama_1083	0.67	-1.5
1,310,824	-		Sama_1083	0.73	-2.0
1,310,909	-		Sama_1083	0.82	-0.6
1,310,958	-		Sama_1083	0.88	-1.6
1,310,958	-		Sama_1083	0.88	+1.7
1,311,043	+				+4.4
1,311,043	+				+0.6
1,311,044	-				-3.0
1,311,064	+				+0.5
1,311,064	+				-1.0
1,311,065	-				-0.7
1,311,065	-				-1.7
1,311,100	-				-2.7
1,311,100	-				-1.2
1,311,107	+				-2.1
1,311,107	+				+0.1
1,311,107	+				-0.7
1,311,107	+				-2.5
1,311,108	-				-0.4
1,311,108	-				+0.3
1,311,108	-				+2.2
1,311,108	-				-2.6
1,311,108	-				-0.3
1,311,108	-				-0.7
1,311,113	+				-1.9
1,311,113	+				-2.4
1,311,113	+				-1.0
1,311,113	+				-0.8
1,311,113	+				-0.8
1,311,113	+				-2.1
1,311,114	-				+1.1
1,311,114	-				+0.0
1,311,114	-				-1.4
1,311,114	-				-0.2
1,311,114	-				+0.0
1,311,140	+				+1.7
1,311,140	+				-0.6
1,311,141	-				-3.1
1,311,163	-				+2.6
1,311,215	-				-0.5