Strain Fitness in Shewanella amazonensis SB2B around Sama_2969

Experiment: Cisplatin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.005 mg/ml
3,534,286	+		Sama_2968	0.31	+0.9
3,534,293	+		Sama_2968	0.32	+0.3
3,534,293	+		Sama_2968	0.32	-1.0
3,534,293	+		Sama_2968	0.32	-0.4
3,534,294	-		Sama_2968	0.32	-0.3
3,534,294	-		Sama_2968	0.32	+0.8
3,534,423	+		Sama_2968	0.43	+0.9
3,534,423	+		Sama_2968	0.43	-0.8
3,534,423	+		Sama_2968	0.43	-0.5
3,534,423	+		Sama_2968	0.43	-0.9
3,534,424	-		Sama_2968	0.43	+0.7
3,534,424	-		Sama_2968	0.43	-0.1
3,534,424	-		Sama_2968	0.43	+0.9
3,534,424	-		Sama_2968	0.43	+0.7
3,534,424	-		Sama_2968	0.43	+0.9
3,534,424	-		Sama_2968	0.43	+0.1
3,534,424	-		Sama_2968	0.43	-0.6
3,534,424	-		Sama_2968	0.43	+1.2
3,534,425	+		Sama_2968	0.43	-0.6
3,534,425	+		Sama_2968	0.43	-1.1
3,534,425	+		Sama_2968	0.43	+1.3
3,534,426	-		Sama_2968	0.44	+0.1
3,534,426	-		Sama_2968	0.44	+0.4
3,534,426	-		Sama_2968	0.44	+0.9
3,534,426	-		Sama_2968	0.44	+0.9
3,534,426	-		Sama_2968	0.44	+0.8
3,534,426	-		Sama_2968	0.44	+0.7
3,534,426	-		Sama_2968	0.44	+1.3
3,534,481	+		Sama_2968	0.48	-1.3
3,534,481	+		Sama_2968	0.48	-0.4
3,534,481	+		Sama_2968	0.48	-0.9
3,534,481	+		Sama_2968	0.48	-1.6
3,534,481	+		Sama_2968	0.48	+0.3
3,534,481	+		Sama_2968	0.48	+0.2
3,534,481	+		Sama_2968	0.48	-0.5
3,534,481	+		Sama_2968	0.48	-1.6
3,534,481	+		Sama_2968	0.48	-0.1
3,534,481	+		Sama_2968	0.48	-0.6
3,534,481	+		Sama_2968	0.48	+0.3
3,534,481	+		Sama_2968	0.48	-0.9
3,534,482	-		Sama_2968	0.48	+0.1
3,534,482	-		Sama_2968	0.48	+0.2
3,534,482	-		Sama_2968	0.48	-0.1
3,534,482	-		Sama_2968	0.48	-0.0
3,534,482	-		Sama_2968	0.48	-0.1
3,534,482	-		Sama_2968	0.48	-0.4
3,534,525	+		Sama_2968	0.52	+0.0
3,534,525	+		Sama_2968	0.52	-0.4
3,534,526	-		Sama_2968	0.52	+0.9
3,534,526	-		Sama_2968	0.52	+2.5
3,534,526	-		Sama_2968	0.52	-0.1
3,534,526	-		Sama_2968	0.52	-0.6
3,534,526	-		Sama_2968	0.52	-0.5
3,534,611	-		Sama_2968	0.60	-0.2
3,534,641	+		Sama_2968	0.63	+0.1
3,534,642	-		Sama_2968	0.63	-0.1
3,534,642	-		Sama_2968	0.63	-0.4
3,534,642	-		Sama_2968	0.63	-0.1
3,534,750	+		Sama_2968	0.72	-0.6
3,534,751	-		Sama_2968	0.72	-0.6
3,534,751	-		Sama_2968	0.72	-1.6
3,534,751	-		Sama_2968	0.72	-1.0
3,534,751	-		Sama_2968	0.72	-0.2
3,534,751	-		Sama_2968	0.72	+0.5
3,534,783	+		Sama_2968	0.75	+0.1
3,534,783	+		Sama_2968	0.75	+0.3
3,534,783	+		Sama_2968	0.75	+0.1
3,534,783	+		Sama_2968	0.75	-0.1
3,534,783	+		Sama_2968	0.75	-0.2
3,534,783	+		Sama_2968	0.75	+0.2
3,534,783	+		Sama_2968	0.75	+1.3
3,534,783	+		Sama_2968	0.75	-0.9
3,534,784	-		Sama_2968	0.75	-0.3
3,534,784	-		Sama_2968	0.75	+1.7
3,534,784	-		Sama_2968	0.75	-0.6
3,534,784	-		Sama_2968	0.75	-0.3
3,534,784	-		Sama_2968	0.75	-0.1
3,534,784	-		Sama_2968	0.75	-0.6
3,534,784	-		Sama_2968	0.75	-1.0
3,534,803	+		Sama_2968	0.77	+0.7
3,534,812	+		Sama_2968	0.78	+0.1
3,534,812	+		Sama_2968	0.78	-0.4
3,534,812	+		Sama_2968	0.78	+0.3
3,534,813	-		Sama_2968	0.78	+0.6
3,534,836	+		Sama_2968	0.80	-1.0
3,534,843	+		Sama_2968	0.80	+0.4
3,534,878	-		Sama_2968	0.83	+0.1
3,534,878	-		Sama_2968	0.83	-0.5
3,534,885	+		Sama_2968	0.84	+0.2
3,534,886	-		Sama_2968	0.84	-1.6
3,534,892	+		Sama_2968	0.85	+0.7
3,534,893	-		Sama_2968	0.85	-0.2
3,534,893	-		Sama_2968	0.85	-0.6
3,534,965	-				-0.3
3,535,006	+				+0.7
3,535,007	-				+0.1
3,535,007	-				-1.3
3,535,007	-				+1.0
3,535,077	-				-1.1
3,535,097	-				-0.3
3,535,123	+				-0.8
3,535,123	+				+0.2
3,535,123	+				+0.3
3,535,123	+				+1.1
3,535,124	-				-0.0
3,535,124	-				-0.3
3,535,124	-				+0.4
3,535,124	-				-0.5
3,535,144	+				+0.9
3,535,144	+				-1.0
3,535,144	+				+1.4
3,535,144	+				-0.1
3,535,144	+				+0.8
3,535,144	+				+1.9
3,535,149	-				-3.0
3,535,149	-				-1.3
3,535,149	-				-0.1
3,535,242	-		Sama_2969	0.11	-0.3
3,535,262	+		Sama_2969	0.14	-0.5
3,535,262	+		Sama_2969	0.14	+0.3
3,535,262	+		Sama_2969	0.14	-0.1
3,535,263	-		Sama_2969	0.15	+0.1
3,535,263	-		Sama_2969	0.15	-0.5
3,535,263	-		Sama_2969	0.15	+0.9
3,535,263	-		Sama_2969	0.15	-0.4
3,535,406	+		Sama_2969	0.36	-0.1
3,535,406	+		Sama_2969	0.36	+0.4
3,535,406	+		Sama_2969	0.36	-0.4
3,535,407	-		Sama_2969	0.36	-0.4
3,535,407	-		Sama_2969	0.36	-1.0
3,535,407	-		Sama_2969	0.36	+1.5
3,535,407	-		Sama_2969	0.36	+0.4
3,535,409	+		Sama_2969	0.36	+0.6
3,535,409	+		Sama_2969	0.36	+0.3
3,535,409	+		Sama_2969	0.36	-0.6
3,535,409	+		Sama_2969	0.36	-0.4
3,535,410	-		Sama_2969	0.36	+0.4
3,535,423	-		Sama_2969	0.38	+0.2
3,535,491	-		Sama_2969	0.48	+0.3
3,535,491	-		Sama_2969	0.48	-0.4
3,535,491	-		Sama_2969	0.48	-0.1
3,535,522	+		Sama_2969	0.53	+0.9
3,535,523	-		Sama_2969	0.53	-0.4
3,535,559	+		Sama_2969	0.58	-1.1
3,535,681	+		Sama_2969	0.76	+0.9
3,535,682	-		Sama_2969	0.77	+0.4
3,535,682	-		Sama_2969	0.77	-0.5
3,535,682	-		Sama_2969	0.77	+0.0
3,535,758	+		Sama_2969	0.88	+1.5
3,535,800	-				-0.1
3,535,806	+				-3.3
3,535,860	+				+0.9
3,535,946	+				+0.1
3,535,952	+				+0.7
3,535,953	-				+0.3
3,535,961	-				-0.9
3,535,961	-				-0.8
3,535,963	+				-1.2
3,535,963	+				+0.2
3,535,963	+				-0.9
3,535,964	-				-0.4
3,535,965	+				+0.2
3,535,965	+				+0.1
3,535,965	+				-0.9
3,535,965	+				+0.3
3,535,965	+				-0.2
3,535,965	+				+1.7
3,535,965	+				-0.1
3,535,966	-				-0.1
3,535,966	-				-0.2
3,535,966	-				-0.3
3,535,966	-				+0.9
3,535,966	-				-0.6
3,535,970	-				-0.2
3,535,996	+				+0.8
3,535,996	+				+0.1
3,535,996	+				-0.6
3,535,997	-				-0.2
3,535,997	-				-1.0
3,536,116	+				+0.9
3,536,117	-				+0.4
3,536,117	-				-0.6
3,536,117	-				+0.2
3,536,117	-				-1.0
3,536,117	-				+0.1
3,536,133	+				-0.6
3,536,204	+		Sama_2970	0.12	+1.3
3,536,219	+		Sama_2970	0.13	+0.2
3,536,219	+		Sama_2970	0.13	-1.1
3,536,219	+		Sama_2970	0.13	+0.4
3,536,220	-		Sama_2970	0.13	-0.1
3,536,268	+		Sama_2970	0.16	+0.1
3,536,269	-		Sama_2970	0.16	-1.3
3,536,326	+		Sama_2970	0.20	+1.7
3,536,326	+		Sama_2970	0.20	+0.2
3,536,326	+		Sama_2970	0.20	+0.4
3,536,327	-		Sama_2970	0.20	-1.1
3,536,327	-		Sama_2970	0.20	-0.5
3,536,327	-		Sama_2970	0.20	-0.5
3,536,362	+		Sama_2970	0.22	-0.9
3,536,363	-		Sama_2970	0.22	-0.5
3,536,404	-		Sama_2970	0.24	+0.1
3,536,496	+		Sama_2970	0.30	+0.8
3,536,528	+		Sama_2970	0.32	-0.5
3,536,528	+		Sama_2970	0.32	+0.7
3,536,528	+		Sama_2970	0.32	-0.5
3,536,529	-		Sama_2970	0.32	+0.1
3,536,555	-		Sama_2970	0.33	-1.0
3,536,581	+		Sama_2970	0.35	+0.4
3,536,671	+		Sama_2970	0.40	-0.8
3,536,671	+		Sama_2970	0.40	+0.3
3,536,671	+		Sama_2970	0.40	-1.3
3,536,672	-		Sama_2970	0.40	+1.7
3,536,672	-		Sama_2970	0.40	-0.1
3,536,672	-		Sama_2970	0.40	-1.6
3,536,742	-		Sama_2970	0.44	-0.2
3,536,752	+		Sama_2970	0.45	-0.9
3,536,753	-		Sama_2970	0.45	+0.4
3,536,753	-		Sama_2970	0.45	-0.1
3,536,821	+		Sama_2970	0.49	+0.1
3,536,821	+		Sama_2970	0.49	-0.3
3,536,821	+		Sama_2970	0.49	+0.5
3,536,821	+		Sama_2970	0.49	+0.9
3,536,821	+		Sama_2970	0.49	+0.0
3,536,821	+		Sama_2970	0.49	-0.2
3,536,822	-		Sama_2970	0.49	-2.1
3,536,822	-		Sama_2970	0.49	-1.1
3,536,825	+		Sama_2970	0.49	+1.3
3,536,825	+		Sama_2970	0.49	-0.3
3,536,825	+		Sama_2970	0.49	-0.4
3,536,825	+		Sama_2970	0.49	-0.0
3,536,825	+		Sama_2970	0.49	-0.6
3,536,825	+		Sama_2970	0.49	-0.1
3,536,825	+		Sama_2970	0.49	+0.9
3,536,826	-		Sama_2970	0.49	-1.5
3,536,826	-		Sama_2970	0.49	+0.9
3,536,826	-		Sama_2970	0.49	-0.1
3,536,826	-		Sama_2970	0.49	-0.1
3,536,826	-		Sama_2970	0.49	+0.2
3,536,826	-		Sama_2970	0.49	-0.4
3,536,826	-		Sama_2970	0.49	+0.8
3,536,826	-		Sama_2970	0.49	-0.3
3,536,826	-		Sama_2970	0.49	-0.9
3,536,826	-		Sama_2970	0.49	+0.8
3,536,826	-		Sama_2970	0.49	+0.5
3,536,826	-		Sama_2970	0.49	-0.3
3,536,826	-		Sama_2970	0.49	+0.3
3,536,828	+		Sama_2970	0.50	-0.5
3,536,829	-		Sama_2970	0.50	+0.5
3,536,829	-		Sama_2970	0.50	-0.0