Strain Fitness in Shewanella amazonensis SB2B around Sama_2657

Experiment: Cisplatin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.005 mg/ml
3,180,247	+		Sama_2655	0.58	-0.0
3,180,248	-		Sama_2655	0.58	-0.3
3,180,248	-		Sama_2655	0.58	-1.3
3,180,248	-		Sama_2655	0.58	-1.3
3,180,248	-		Sama_2655	0.58	+0.3
3,180,250	+		Sama_2655	0.58	-0.7
3,180,251	-		Sama_2655	0.58	-0.4
3,180,251	-		Sama_2655	0.58	+0.8
3,180,251	-		Sama_2655	0.58	-0.4
3,180,251	-		Sama_2655	0.58	+0.8
3,180,269	+		Sama_2655	0.60	-1.4
3,180,269	+		Sama_2655	0.60	-0.4
3,180,270	-		Sama_2655	0.60	+0.2
3,180,270	-		Sama_2655	0.60	-2.9
3,180,292	+		Sama_2655	0.63	-0.4
3,180,292	+		Sama_2655	0.63	+0.3
3,180,405	+		Sama_2655	0.75	+0.3
3,180,405	+		Sama_2655	0.75	-1.1
3,180,410	+		Sama_2655	0.76	+0.9
3,180,411	-		Sama_2655	0.76	-0.3
3,180,411	-		Sama_2655	0.76	+0.7
3,180,411	-		Sama_2655	0.76	+0.1
3,180,411	-		Sama_2655	0.76	+0.9
3,180,411	-		Sama_2655	0.76	-0.3
3,180,411	-		Sama_2655	0.76	-1.9
3,180,435	+		Sama_2655	0.79	-0.6
3,180,435	+		Sama_2655	0.79	-2.3
3,180,436	-		Sama_2655	0.79	-1.9
3,180,480	-		Sama_2655	0.84	-0.2
3,180,604	+				-0.3
3,180,605	-				+0.9
3,180,615	-				-1.0
3,180,686	+				-0.8
3,180,748	+		Sama_2656	0.14	+1.5
3,180,748	+		Sama_2656	0.14	+0.5
3,180,749	-		Sama_2656	0.14	-0.7
3,180,749	-		Sama_2656	0.14	-0.2
3,180,752	+		Sama_2656	0.15	+1.5
3,180,752	+		Sama_2656	0.15	+0.4
3,180,752	+		Sama_2656	0.15	-0.6
3,180,752	+		Sama_2656	0.15	-0.1
3,180,752	+		Sama_2656	0.15	+1.9
3,180,752	+		Sama_2656	0.15	+0.2
3,180,752	+		Sama_2656	0.15	+0.2
3,180,752	+		Sama_2656	0.15	-1.0
3,180,752	+		Sama_2656	0.15	+0.3
3,180,752	+		Sama_2656	0.15	+0.5
3,180,752	+		Sama_2656	0.15	+0.6
3,180,752	+		Sama_2656	0.15	-0.5
3,180,752	+		Sama_2656	0.15	+0.0
3,180,752	+		Sama_2656	0.15	+0.2
3,180,752	+		Sama_2656	0.15	-0.1
3,180,752	+		Sama_2656	0.15	+0.5
3,180,752	+		Sama_2656	0.15	-2.3
3,180,752	+		Sama_2656	0.15	+1.1
3,180,752	+		Sama_2656	0.15	-0.7
3,180,752	+		Sama_2656	0.15	-0.1
3,180,752	+		Sama_2656	0.15	-1.8
3,180,753	-		Sama_2656	0.15	+0.4
3,180,753	-		Sama_2656	0.15	-1.1
3,180,753	-		Sama_2656	0.15	-0.1
3,180,753	-		Sama_2656	0.15	-1.3
3,180,753	-		Sama_2656	0.15	-0.2
3,180,753	-		Sama_2656	0.15	+0.1
3,180,753	-		Sama_2656	0.15	-0.4
3,180,753	-		Sama_2656	0.15	-1.7
3,180,753	-		Sama_2656	0.15	+0.4
3,180,753	-		Sama_2656	0.15	-0.1
3,180,753	-		Sama_2656	0.15	+1.3
3,180,753	-		Sama_2656	0.15	-0.9
3,180,753	-		Sama_2656	0.15	-1.1
3,180,753	-		Sama_2656	0.15	+1.1
3,180,753	-		Sama_2656	0.15	-0.1
3,180,756	+		Sama_2656	0.16	-1.1
3,180,757	-		Sama_2656	0.16	-1.0
3,180,757	-		Sama_2656	0.16	-1.3
3,180,776	+		Sama_2656	0.19	-0.1
3,180,801	+		Sama_2656	0.24	-1.1
3,180,813	+		Sama_2656	0.26	-0.7
3,180,813	+		Sama_2656	0.26	+1.2
3,180,844	-		Sama_2656	0.32	-0.8
3,180,918	-		Sama_2656	0.45	-1.3
3,180,931	-		Sama_2656	0.47	+1.6
3,180,947	+		Sama_2656	0.50	+0.2
3,180,947	+		Sama_2656	0.50	-0.1
3,180,947	+		Sama_2656	0.50	-1.8
3,180,948	-		Sama_2656	0.50	+1.3
3,180,948	-		Sama_2656	0.50	-0.4
3,180,948	-		Sama_2656	0.50	+1.5
3,180,948	-		Sama_2656	0.50	+0.5
3,180,961	+		Sama_2656	0.53	+1.4
3,180,961	+		Sama_2656	0.53	-0.9
3,180,961	+		Sama_2656	0.53	+1.0
3,180,961	+		Sama_2656	0.53	-0.8
3,180,961	+		Sama_2656	0.53	+0.3
3,180,961	+		Sama_2656	0.53	-1.9
3,180,961	+		Sama_2656	0.53	-1.7
3,180,961	+		Sama_2656	0.53	-1.5
3,180,961	+		Sama_2656	0.53	+1.5
3,180,961	+		Sama_2656	0.53	+0.0
3,180,962	-		Sama_2656	0.53	-0.7
3,180,962	-		Sama_2656	0.53	-0.1
3,180,962	-		Sama_2656	0.53	-0.6
3,180,962	-		Sama_2656	0.53	-0.4
3,180,962	-		Sama_2656	0.53	+1.9
3,180,962	-		Sama_2656	0.53	+0.4
3,180,962	-		Sama_2656	0.53	-1.7
3,180,962	-		Sama_2656	0.53	-0.8
3,180,962	-		Sama_2656	0.53	-1.4
3,180,962	-		Sama_2656	0.53	-0.8
3,180,962	-		Sama_2656	0.53	-0.4
3,180,962	-		Sama_2656	0.53	-0.6
3,180,962	-		Sama_2656	0.53	-1.1
3,180,962	-		Sama_2656	0.53	-0.3
3,180,963	+		Sama_2656	0.53	-0.3
3,180,963	+		Sama_2656	0.53	+1.5
3,180,963	+		Sama_2656	0.53	-0.3
3,180,964	-		Sama_2656	0.53	+0.3
3,180,970	+		Sama_2656	0.54	+1.5
3,180,970	+		Sama_2656	0.54	-0.2
3,180,971	-		Sama_2656	0.55	+0.1
3,180,971	-		Sama_2656	0.55	-0.1
3,180,971	-		Sama_2656	0.55	-1.5
3,181,011	-		Sama_2656	0.62	-0.1
3,181,011	-		Sama_2656	0.62	-1.4
3,181,049	+		Sama_2656	0.69	-1.2
3,181,049	+		Sama_2656	0.69	+1.5
3,181,050	-		Sama_2656	0.69	-0.1
3,181,083	+		Sama_2656	0.75	-0.8
3,181,083	+		Sama_2656	0.75	+0.4
3,181,083	+		Sama_2656	0.75	-0.1
3,181,084	-		Sama_2656	0.75	-0.5
3,181,173	+				-0.5
3,181,174	-				+1.6
3,181,337	+		Sama_2657	0.14	-1.4
3,181,371	+		Sama_2657	0.18	+0.6
3,181,372	-		Sama_2657	0.18	+0.3
3,181,372	-		Sama_2657	0.18	-0.6
3,181,436	+		Sama_2657	0.26	-0.6
3,181,436	+		Sama_2657	0.26	-0.3
3,181,533	+		Sama_2657	0.38	-0.5
3,181,533	+		Sama_2657	0.38	-2.3
3,181,580	+		Sama_2657	0.44	+0.1
3,181,602	+		Sama_2657	0.46	+0.3
3,181,619	+		Sama_2657	0.48	-0.1
3,181,646	-		Sama_2657	0.52	+0.2
3,181,664	+		Sama_2657	0.54	+0.2
3,181,664	+		Sama_2657	0.54	-1.1
3,181,664	+		Sama_2657	0.54	-0.7
3,181,665	-		Sama_2657	0.54	+0.5
3,181,665	-		Sama_2657	0.54	-2.0
3,181,674	+		Sama_2657	0.55	-0.9
3,181,723	-		Sama_2657	0.61	+0.6
3,181,794	+		Sama_2657	0.70	-0.5
3,181,857	+		Sama_2657	0.77	-0.7
3,181,857	+		Sama_2657	0.77	-1.0
3,181,858	-		Sama_2657	0.77	-1.3
3,181,858	-		Sama_2657	0.77	+0.3
3,181,858	-		Sama_2657	0.77	+1.1
3,181,862	+		Sama_2657	0.78	-0.9
3,181,863	-		Sama_2657	0.78	+0.3
3,181,863	-		Sama_2657	0.78	-0.2
3,181,863	-		Sama_2657	0.78	-0.1
3,181,863	-		Sama_2657	0.78	-1.0
3,181,910	+		Sama_2657	0.84	-0.1
3,181,910	+		Sama_2657	0.84	+0.4
3,181,910	+		Sama_2657	0.84	+0.1
3,181,911	-		Sama_2657	0.84	-0.3
3,181,911	-		Sama_2657	0.84	-1.3
3,181,911	-		Sama_2657	0.84	-2.4
3,181,911	-		Sama_2657	0.84	-0.7
3,181,911	-		Sama_2657	0.84	+0.3
3,181,911	-		Sama_2657	0.84	-0.1
3,181,950	+		Sama_2657	0.89	+0.5
3,181,950	+		Sama_2657	0.89	-1.6
3,181,951	-		Sama_2657	0.89	+0.0
3,181,951	-		Sama_2657	0.89	+0.6
3,181,951	-		Sama_2657	0.89	-0.1
3,181,951	-		Sama_2657	0.89	-0.7
3,181,953	+		Sama_2657	0.89	-2.3
3,181,953	+		Sama_2657	0.89	-0.6
3,181,954	-		Sama_2657	0.89	-1.2
3,181,954	-		Sama_2657	0.89	+0.9
3,181,954	-		Sama_2657	0.89	+0.1
3,182,059	+				-0.8
3,182,060	-				+0.5
3,182,060	-				+1.6
3,182,060	-				-0.3
3,182,060	-				-1.6
3,182,080	-				+0.1
3,182,080	-				-0.3
3,182,106	-				-0.4
3,182,113	+				+0.3
3,182,113	+				+0.0
3,182,113	+				-0.2
3,182,113	+				-0.6
3,182,113	+				+0.2
3,182,113	+				-0.3
3,182,113	+				+0.4
3,182,113	+				+0.6
3,182,113	+				+0.6
3,182,113	+				+0.3
3,182,114	-				+0.1
3,182,114	-				+0.9
3,182,114	-				-1.3
3,182,114	-				-0.4
3,182,114	-				-0.6
3,182,156	+		Sama_2658	0.17	+0.7
3,182,156	+		Sama_2658	0.17	-0.4
3,182,156	+		Sama_2658	0.17	+0.9
3,182,156	+		Sama_2658	0.17	-0.1
3,182,156	+		Sama_2658	0.17	-0.1
3,182,156	+		Sama_2658	0.17	-0.4
3,182,156	+		Sama_2658	0.17	-0.2
3,182,156	+		Sama_2658	0.17	-1.3
3,182,156	+		Sama_2658	0.17	+0.3
3,182,157	-		Sama_2658	0.17	+0.5
3,182,157	-		Sama_2658	0.17	-0.1
3,182,157	-		Sama_2658	0.17	-0.1
3,182,157	-		Sama_2658	0.17	-1.0
3,182,157	-		Sama_2658	0.17	-0.5
3,182,157	-		Sama_2658	0.17	-0.3
3,182,157	-		Sama_2658	0.17	-1.2
3,182,157	-		Sama_2658	0.17	+0.4
3,182,157	-		Sama_2658	0.17	+0.0
3,182,157	-		Sama_2658	0.17	-0.1
3,182,177	-		Sama_2658	0.21	-1.0
3,182,193	+		Sama_2658	0.24	-0.6
3,182,193	+		Sama_2658	0.24	+1.5
3,182,193	+		Sama_2658	0.24	-0.2
3,182,193	+		Sama_2658	0.24	-1.9
3,182,194	-		Sama_2658	0.24	-0.2
3,182,296	+		Sama_2658	0.44	+1.7
3,182,296	+		Sama_2658	0.44	+0.6
3,182,296	+		Sama_2658	0.44	-0.1
3,182,296	+		Sama_2658	0.44	+0.1
3,182,297	-		Sama_2658	0.44	-0.7
3,182,297	-		Sama_2658	0.44	-0.2
3,182,297	-		Sama_2658	0.44	-0.5
3,182,297	-		Sama_2658	0.44	+0.5
3,182,358	+		Sama_2658	0.56	-0.7
3,182,361	+		Sama_2658	0.57	-2.4
3,182,361	+		Sama_2658	0.57	-0.8
3,182,361	+		Sama_2658	0.57	-1.1
3,182,361	+		Sama_2658	0.57	-1.1
3,182,361	+		Sama_2658	0.57	+2.1
3,182,361	+		Sama_2658	0.57	+0.1
3,182,362	-		Sama_2658	0.57	-0.6
3,182,362	-		Sama_2658	0.57	+1.3
3,182,362	-		Sama_2658	0.57	-0.1
3,182,362	-		Sama_2658	0.57	+0.5
3,182,362	-		Sama_2658	0.57	-0.9
3,182,362	-		Sama_2658	0.57	-0.5
3,182,362	-		Sama_2658	0.57	+0.3
3,182,390	+		Sama_2658	0.63	-0.5
3,182,390	+		Sama_2658	0.63	-0.7
3,182,391	-		Sama_2658	0.63	-1.0
3,182,393	+		Sama_2658	0.63	+1.3
3,182,393	+		Sama_2658	0.63	-0.3
3,182,393	+		Sama_2658	0.63	+1.0
3,182,394	-		Sama_2658	0.63	+0.5
3,182,394	-		Sama_2658	0.63	-2.3
3,182,394	-		Sama_2658	0.63	-0.8
3,182,451	+		Sama_2658	0.74	+0.2
3,182,451	+		Sama_2658	0.74	+0.6
3,182,451	+		Sama_2658	0.74	+1.7
3,182,451	+		Sama_2658	0.74	-0.0
3,182,452	-		Sama_2658	0.75	-0.5
3,182,484	+		Sama_2658	0.81	+0.5
3,182,484	+		Sama_2658	0.81	+0.7
3,182,484	+		Sama_2658	0.81	-2.1
3,182,485	-		Sama_2658	0.81	-0.3
3,182,553	+				-1.4
3,182,553	+				-0.5
3,182,553	+				-0.3
3,182,554	-				-1.3
3,182,554	-				-0.4
3,182,554	-				+0.3
3,182,554	-				+0.5
3,182,606	+				+0.9
3,182,606	+				-0.4
3,182,607	-				-1.9
3,182,607	-				+0.4
3,182,607	-				+0.5
3,182,646	+				-0.1
3,182,646	+				+1.9
3,182,647	-				-0.5
3,182,647	-				+0.0
3,182,699	-				+0.4
3,182,699	-				+1.3
3,182,768	-				-0.4
3,182,773	-				-1.7
3,182,783	+				-1.0
3,182,783	+				-0.4
3,182,783	+				-1.1
3,182,794	+				+0.0
3,182,795	-				-0.0
3,182,835	-				-0.6
3,182,840	+				-1.2
3,182,841	-				-0.1
3,182,858	+				-0.7
3,182,859	-				-0.3
3,182,868	+				-2.0
3,182,868	+				+0.3
3,182,868	+				+0.2
3,182,868	+				+0.1
3,182,868	+				+0.3
3,182,868	+				+2.1
3,182,868	+				-0.1
3,182,869	-				-1.1
3,182,869	-				-0.3
3,182,869	-				-0.9
3,182,869	-				-0.7
3,182,869	-				+0.9
3,182,869	-				-0.5
3,182,869	-				+0.4
3,182,869	-				+0.3
3,182,869	-				-1.5
3,182,869	-				+0.3
3,182,869	-				-0.2
3,182,869	-				+0.6
3,182,869	-				-0.1
3,182,869	-				-0.1
3,182,869	-				-0.4
3,182,869	-				+0.3
3,182,869	-				+0.3
3,182,870	+				+0.5
3,182,870	+				-0.9
3,182,870	+				-0.9
3,182,870	+				+0.2
3,182,870	+				+0.0
3,182,870	+				-0.1
3,182,870	+				-0.1
3,182,870	+				-0.7
3,182,870	+				+0.5
3,182,870	+				-1.0
3,182,871	-				-0.3
3,182,871	-				-0.2
3,182,871	-				-0.5
3,182,871	-				+0.0
3,182,871	-				+0.6
3,182,871	-				+0.0
3,182,871	-				-0.8
3,182,880	+				-0.3
3,182,881	-				-0.7
3,182,896	-				+0.3
3,182,903	-				-0.7
3,182,943	-				+0.5
3,182,955	+				+0.1
3,182,955	+				-0.7
3,182,955	+				-0.9
3,182,955	+				+0.2
3,182,955	+				-1.1
3,182,956	-				-1.6
3,182,956	-				+0.7
3,182,956	-				-0.4
3,182,956	-				-1.1
3,182,956	-				-1.4
3,182,956	-				+1.9
3,182,974	+		Sama_2659	0.13	+1.9
3,182,974	+		Sama_2659	0.13	-1.3
3,182,975	-		Sama_2659	0.13	-0.3
3,182,989	-		Sama_2659	0.16	-1.1