Strain Fitness in Shewanella amazonensis SB2B around Sama_2593
Experiment: Cisplatin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.005 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,101,430 | - | +0.1 | |||
3,101,430 | - | -0.1 | |||
3,101,510 | + | +2.2 | |||
3,101,811 | + | +0.9 | |||
3,101,811 | + | +1.5 | |||
3,101,811 | + | -0.6 | |||
3,101,811 | + | +0.9 | |||
3,101,812 | - | +1.0 | |||
3,101,812 | - | +1.1 | |||
3,101,812 | - | +0.2 | |||
3,101,812 | - | +1.0 | |||
3,101,812 | - | +1.0 | |||
3,101,815 | + | +0.1 | |||
3,101,816 | - | +3.5 | |||
3,101,832 | + | +0.4 | |||
3,101,832 | + | +0.7 | |||
3,101,832 | + | -1.2 | |||
3,101,870 | + | +0.9 | |||
3,101,870 | + | +0.7 | |||
3,102,548 | + | +0.2 |
Or see this region's nucleotide sequence