Strain Fitness in Shewanella amazonensis SB2B around Sama_2169

Experiment: Cisplatin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.005 mg/ml
2,623,403	-	fadI	Sama_2168	0.42	-0.3
2,623,459	+	fadI	Sama_2168	0.47	+0.3
2,623,460	-	fadI	Sama_2168	0.47	+0.7
2,623,482	+	fadI	Sama_2168	0.48	-0.6
2,623,483	-	fadI	Sama_2168	0.48	+0.5
2,623,548	-	fadI	Sama_2168	0.53	+0.3
2,623,628	-	fadI	Sama_2168	0.59	-1.0
2,623,768	-	fadI	Sama_2168	0.70	+0.5
2,623,768	-	fadI	Sama_2168	0.70	+0.7
2,623,883	-	fadI	Sama_2168	0.79	-0.3
2,623,883	-	fadI	Sama_2168	0.79	-0.4
2,623,883	-	fadI	Sama_2168	0.79	-1.2
2,623,883	-	fadI	Sama_2168	0.79	-0.2
2,623,883	-	fadI	Sama_2168	0.79	-1.3
2,623,883	-	fadI	Sama_2168	0.79	+0.7
2,623,956	+	fadI	Sama_2168	0.84	+0.2
2,623,957	-	fadI	Sama_2168	0.85	+1.5
2,623,957	-	fadI	Sama_2168	0.85	+0.2
2,623,957	-	fadI	Sama_2168	0.85	-0.6
2,623,959	+	fadI	Sama_2168	0.85	-0.9
2,623,959	+	fadI	Sama_2168	0.85	+1.1
2,623,959	+	fadI	Sama_2168	0.85	-0.8
2,623,970	-	fadI	Sama_2168	0.86	+0.9
2,624,014	-	fadI	Sama_2168	0.89	+2.3
2,624,118	-				+0.3
2,624,139	+				+0.7
2,624,140	-				+0.9
2,624,173	+				+0.9
2,624,173	+				-0.4
2,624,174	-				+0.7
2,624,342	+				+0.1
2,624,360	+				+1.4
2,624,360	+				+1.0
2,624,361	-				-2.6
2,624,366	+				-1.1
2,624,371	+				-0.7
2,624,371	+				+0.7
2,624,371	+				-0.6
2,624,471	-				-2.2
2,624,481	+				-1.7
2,624,503	-		Sama_2169	0.12	-1.6
2,624,630	+		Sama_2169	0.25	-3.1
2,624,630	+		Sama_2169	0.25	-1.5
2,624,631	-		Sama_2169	0.25	-1.4
2,624,631	-		Sama_2169	0.25	-3.2
2,624,631	-		Sama_2169	0.25	-1.9
2,624,671	+		Sama_2169	0.30	-1.9
2,624,672	-		Sama_2169	0.30	-2.2
2,624,686	+		Sama_2169	0.31	-2.0
2,624,686	+		Sama_2169	0.31	-2.9
2,624,783	+		Sama_2169	0.41	-1.3
2,624,846	+		Sama_2169	0.48	-2.1
2,624,847	-		Sama_2169	0.48	-2.0
2,624,847	-		Sama_2169	0.48	-1.3
2,624,901	-		Sama_2169	0.54	-1.2
2,624,932	+		Sama_2169	0.57	-2.2
2,624,932	+		Sama_2169	0.57	-2.3
2,624,932	+		Sama_2169	0.57	-2.0
2,625,013	+		Sama_2169	0.65	-1.8
2,625,013	+		Sama_2169	0.65	-0.3
2,625,032	+		Sama_2169	0.67	-4.4
2,625,032	+		Sama_2169	0.67	-0.9
2,625,056	+		Sama_2169	0.70	-1.5
2,625,056	+		Sama_2169	0.70	-1.1
2,625,056	+		Sama_2169	0.70	-1.3
2,625,056	+		Sama_2169	0.70	-2.2
2,625,056	+		Sama_2169	0.70	-2.5
2,625,056	+		Sama_2169	0.70	-0.6
2,625,057	-		Sama_2169	0.70	-1.3
2,625,057	-		Sama_2169	0.70	-1.3
2,625,057	-		Sama_2169	0.70	-3.5
2,625,057	-		Sama_2169	0.70	-1.1
2,625,058	+		Sama_2169	0.70	+0.4
2,625,058	+		Sama_2169	0.70	-1.3
2,625,058	+		Sama_2169	0.70	-0.8
2,625,058	+		Sama_2169	0.70	-0.6
2,625,058	+		Sama_2169	0.70	-1.6
2,625,058	+		Sama_2169	0.70	-0.9
2,625,058	+		Sama_2169	0.70	-0.3
2,625,059	-		Sama_2169	0.70	-1.6
2,625,059	-		Sama_2169	0.70	-0.0
2,625,059	-		Sama_2169	0.70	-2.1
2,625,094	+		Sama_2169	0.74	-2.7
2,625,094	+		Sama_2169	0.74	-0.3
2,625,095	-		Sama_2169	0.74	-2.7
2,625,098	+		Sama_2169	0.74	-0.3
2,625,099	-		Sama_2169	0.74	-1.1
2,625,099	-		Sama_2169	0.74	-2.1
2,625,099	-		Sama_2169	0.74	-2.3
2,625,128	+		Sama_2169	0.77	-2.1
2,625,129	-		Sama_2169	0.78	-2.0
2,625,129	-		Sama_2169	0.78	-2.0
2,625,366	+				-3.0
2,625,366	+				-1.2
2,625,366	+				-1.8
2,625,366	+				-1.3
2,625,367	-				-2.1
2,625,367	-				-2.3
2,625,489	+		Sama_2170	0.15	-1.3
2,625,686	-		Sama_2170	0.36	-1.3
2,625,686	-		Sama_2170	0.36	-2.2
2,625,758	+		Sama_2170	0.43	-1.3
2,625,759	-		Sama_2170	0.43	+0.1
2,625,759	-		Sama_2170	0.43	-2.2
2,625,832	-		Sama_2170	0.51	-2.1
2,625,887	+		Sama_2170	0.57	-2.5
2,626,169	-		Sama_2170	0.86	-1.3
2,626,169	-		Sama_2170	0.86	-1.6
2,626,289	+				-1.3
2,626,289	+				-0.2
2,626,289	+				+0.2
2,626,297	+				-1.0
2,626,300	+				-0.9
2,626,301	-				-1.3