Strain Fitness in Shewanella amazonensis SB2B around Sama_1864

Experiment: Cisplatin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.005 mg/ml
2,270,763	+		Sama_1863	0.68	-0.9
2,270,770	+		Sama_1863	0.68	+0.2
2,270,770	+		Sama_1863	0.68	-0.3
2,270,795	-		Sama_1863	0.69	-0.8
2,270,811	-		Sama_1863	0.70	-0.0
2,270,811	-		Sama_1863	0.70	-1.3
2,270,816	+		Sama_1863	0.70	-0.8
2,270,816	+		Sama_1863	0.70	+0.7
2,270,816	+		Sama_1863	0.70	-0.9
2,270,817	-		Sama_1863	0.70	+0.2
2,270,817	-		Sama_1863	0.70	+0.7
2,270,817	-		Sama_1863	0.70	-0.3
2,270,831	-		Sama_1863	0.70	-1.4
2,270,905	+		Sama_1863	0.73	-0.1
2,270,905	+		Sama_1863	0.73	-0.7
2,270,906	-		Sama_1863	0.73	-0.1
2,270,906	-		Sama_1863	0.73	+0.3
2,270,919	-		Sama_1863	0.73	-1.7
2,270,953	+		Sama_1863	0.74	-1.2
2,270,953	+		Sama_1863	0.74	+0.7
2,270,953	+		Sama_1863	0.74	+0.1
2,270,954	-		Sama_1863	0.74	-0.4
2,271,058	+		Sama_1863	0.78	-0.2
2,271,129	+		Sama_1863	0.80	-0.3
2,271,130	-		Sama_1863	0.80	-1.3
2,271,130	-		Sama_1863	0.80	+2.5
2,271,164	+		Sama_1863	0.81	+1.2
2,271,164	+		Sama_1863	0.81	-1.3
2,271,165	-		Sama_1863	0.81	+0.4
2,271,165	-		Sama_1863	0.81	-1.3
2,271,165	-		Sama_1863	0.81	-0.3
2,271,223	+		Sama_1863	0.83	+1.0
2,271,223	+		Sama_1863	0.83	-0.6
2,271,274	+		Sama_1863	0.85	-0.6
2,271,296	+		Sama_1863	0.85	+0.9
2,271,296	+		Sama_1863	0.85	-0.4
2,271,297	-		Sama_1863	0.85	-0.5
2,271,477	+				+0.4
2,271,477	+				+0.2
2,271,478	-				-0.9
2,271,478	-				-0.7
2,271,652	+				+0.2
2,271,653	-				+0.3
2,271,715	+				+1.1
2,271,715	+				-1.4
2,271,732	+				+0.7
2,271,733	-				-0.6
2,271,742	+				-0.1
2,271,743	-				-0.7
2,271,765	+				-1.2
2,271,831	+				-1.8
2,271,832	-				-1.7
2,271,832	-				-0.3
2,271,832	-				-1.7
2,271,882	-				+0.7
2,271,882	-				-0.9
2,272,081	+		Sama_1864	0.15	-0.3
2,272,082	-		Sama_1864	0.15	-0.7
2,272,148	-		Sama_1864	0.18	+0.1
2,272,185	-		Sama_1864	0.19	+0.3
2,272,185	-		Sama_1864	0.19	-0.3
2,272,185	-		Sama_1864	0.19	-0.7
2,272,199	+		Sama_1864	0.20	+0.2
2,272,199	+		Sama_1864	0.20	-1.8
2,272,200	-		Sama_1864	0.20	+0.1
2,272,200	-		Sama_1864	0.20	-0.9
2,272,282	+		Sama_1864	0.23	-2.3
2,272,307	-		Sama_1864	0.24	-0.6
2,272,418	+		Sama_1864	0.29	-2.1
2,272,435	+		Sama_1864	0.30	-0.7
2,272,482	+		Sama_1864	0.32	-0.8
2,272,482	+		Sama_1864	0.32	+0.1
2,272,483	-		Sama_1864	0.32	+0.1
2,272,483	-		Sama_1864	0.32	-1.3
2,272,483	-		Sama_1864	0.32	+0.3
2,272,494	-		Sama_1864	0.33	-0.1
2,272,516	+		Sama_1864	0.34	+0.1
2,272,517	-		Sama_1864	0.34	+0.1
2,272,518	+		Sama_1864	0.34	-2.0
2,272,518	+		Sama_1864	0.34	-0.7
2,272,518	+		Sama_1864	0.34	+0.3
2,272,518	+		Sama_1864	0.34	-0.2
2,272,519	-		Sama_1864	0.34	-2.8
2,272,522	+		Sama_1864	0.34	-0.8
2,272,522	+		Sama_1864	0.34	+0.3
2,272,601	+		Sama_1864	0.37	+0.7
2,272,657	+		Sama_1864	0.40	+0.3
2,272,664	-		Sama_1864	0.40	-0.2
2,272,664	-		Sama_1864	0.40	-1.9
2,272,724	+		Sama_1864	0.43	+0.5
2,272,751	-		Sama_1864	0.44	+2.2
2,272,801	-		Sama_1864	0.46	+0.5
2,272,815	+		Sama_1864	0.47	+0.5
2,272,816	-		Sama_1864	0.47	+0.2
2,272,845	-		Sama_1864	0.48	+0.3
2,272,845	-		Sama_1864	0.48	+0.0
2,272,874	+		Sama_1864	0.49	-0.3
2,272,875	-		Sama_1864	0.49	-1.1
2,272,875	-		Sama_1864	0.49	+0.7
2,272,875	-		Sama_1864	0.49	-1.2
2,272,875	-		Sama_1864	0.49	-0.7
2,272,875	-		Sama_1864	0.49	-1.5
2,272,878	-		Sama_1864	0.49	-1.3
2,272,878	-		Sama_1864	0.49	+0.4
2,272,878	-		Sama_1864	0.49	-0.2
2,272,878	-		Sama_1864	0.49	-0.6
2,272,878	-		Sama_1864	0.49	-0.3
2,272,878	-		Sama_1864	0.49	-1.0
2,272,878	-		Sama_1864	0.49	+0.2
2,272,899	-		Sama_1864	0.50	-0.1
2,272,988	-		Sama_1864	0.54	+1.4
2,272,988	-		Sama_1864	0.54	-0.3
2,272,988	-		Sama_1864	0.54	-0.3
2,273,072	+		Sama_1864	0.58	-0.9
2,273,112	-		Sama_1864	0.60	-0.8
2,273,112	-		Sama_1864	0.60	-0.3
2,273,137	+		Sama_1864	0.61	-2.2
2,273,181	+		Sama_1864	0.63	-0.4
2,273,181	+		Sama_1864	0.63	+2.0
2,273,182	-		Sama_1864	0.63	-0.3
2,273,182	-		Sama_1864	0.63	-0.6
2,273,205	+		Sama_1864	0.64	-0.9
2,273,205	+		Sama_1864	0.64	-0.9
2,273,205	+		Sama_1864	0.64	-1.9
2,273,205	+		Sama_1864	0.64	+0.2
2,273,206	-		Sama_1864	0.64	-0.1
2,273,206	-		Sama_1864	0.64	-0.2
2,273,206	-		Sama_1864	0.64	-0.3
2,273,206	-		Sama_1864	0.64	+0.7
2,273,206	-		Sama_1864	0.64	+0.2
2,273,223	+		Sama_1864	0.64	+0.7
2,273,248	+		Sama_1864	0.66	-1.3
2,273,249	-		Sama_1864	0.66	-1.5
2,273,268	-		Sama_1864	0.66	-0.5
2,273,333	+		Sama_1864	0.69	-0.4
2,273,333	+		Sama_1864	0.69	-0.5
2,273,333	+		Sama_1864	0.69	-1.4
2,273,333	+		Sama_1864	0.69	-1.2
2,273,333	+		Sama_1864	0.69	+1.7
2,273,334	-		Sama_1864	0.69	+0.2
2,273,334	-		Sama_1864	0.69	-1.0
2,273,334	-		Sama_1864	0.69	+0.5
2,273,334	-		Sama_1864	0.69	+0.7
2,273,334	-		Sama_1864	0.69	+0.7
2,273,334	-		Sama_1864	0.69	-2.9
2,273,334	-		Sama_1864	0.69	-0.7
2,273,335	+		Sama_1864	0.69	+0.7
2,273,335	+		Sama_1864	0.69	-0.9
2,273,335	+		Sama_1864	0.69	+0.9
2,273,335	+		Sama_1864	0.69	-0.3
2,273,336	-		Sama_1864	0.69	-0.8
2,273,336	-		Sama_1864	0.69	-0.6
2,273,336	-		Sama_1864	0.69	-0.3
2,273,336	-		Sama_1864	0.69	-0.3
2,273,336	-		Sama_1864	0.69	-1.5
2,273,620	+		Sama_1864	0.82	+0.1
2,273,775	+		Sama_1864	0.89	-0.3
2,273,953	+				-2.7
2,273,953	+				+0.5
2,273,954	-				+0.1
2,274,020	+				-0.6
2,274,020	+				-0.3
2,274,021	-				+0.2
2,274,021	-				-0.3
2,274,021	-				+0.1
2,274,021	-				-1.8
2,274,021	-				+0.7
2,274,021	-				+0.7
2,274,021	-				-0.2
2,274,021	-				+0.1
2,274,183	+				+1.1
2,274,183	+				+0.7
2,274,183	+				-0.6
2,274,184	-				-1.5
2,274,184	-				-1.3
2,274,184	-				+0.7
2,274,184	-				-0.2
2,274,184	-				-1.0
2,274,184	-				-0.1
2,274,184	-				+0.7
2,274,184	-				-0.5
2,274,184	-				+0.7
2,274,250	+				-1.2
2,274,254	+				+1.4
2,274,254	+				+0.4
2,274,255	-				-0.6
2,274,255	-				-0.9
2,274,255	-				-0.3
2,274,418	-		Sama_1865	0.31	-0.1
2,274,478	+		Sama_1865	0.40	+0.1
2,274,535	+		Sama_1865	0.48	-0.3
2,274,535	+		Sama_1865	0.48	-1.7
2,274,536	-		Sama_1865	0.48	-0.7
2,274,536	-		Sama_1865	0.48	+0.4
2,274,610	+		Sama_1865	0.59	+0.1
2,274,610	+		Sama_1865	0.59	+0.4
2,274,611	-		Sama_1865	0.59	-2.2
2,274,611	-		Sama_1865	0.59	+0.2
2,274,611	-		Sama_1865	0.59	+0.2
2,274,611	-		Sama_1865	0.59	-0.8
2,274,611	-		Sama_1865	0.59	+0.9
2,274,611	-		Sama_1865	0.59	+0.3
2,274,611	-		Sama_1865	0.59	+1.0
2,274,614	+		Sama_1865	0.60	-0.3
2,274,615	-		Sama_1865	0.60	-1.5
2,274,677	-		Sama_1865	0.69	-0.2
2,274,677	-		Sama_1865	0.69	-2.2
2,274,677	-		Sama_1865	0.69	+0.5
2,274,678	+		Sama_1865	0.69	-1.1
2,274,678	+		Sama_1865	0.69	-0.2
2,274,678	+		Sama_1865	0.69	+1.0
2,274,679	-		Sama_1865	0.69	-0.7
2,274,679	-		Sama_1865	0.69	+0.0
2,274,679	-		Sama_1865	0.69	+0.3
2,274,679	-		Sama_1865	0.69	+1.3
2,274,679	-		Sama_1865	0.69	-1.2
2,274,846	+				+1.2
2,275,013	-				-1.2
2,275,013	-				+0.9
2,275,015	-				-1.3
2,275,035	-				+0.2
2,275,035	-				-0.2