Strain Fitness in Shewanella amazonensis SB2B around Sama_1843

Experiment: Cisplatin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.005 mg/ml
2,242,406	-	ruvC	Sama_1841	0.81	-0.3
2,242,422	+	ruvC	Sama_1841	0.84	+0.7
2,242,422	+	ruvC	Sama_1841	0.84	+0.1
2,242,549	+				-1.3
2,242,554	+				+0.1
2,242,555	-				-0.5
2,242,555	-				-0.6
2,242,555	-				+0.1
2,242,730	-		Sama_1842	0.30	-0.7
2,242,730	-		Sama_1842	0.30	-1.8
2,242,735	-		Sama_1842	0.30	+0.1
2,242,735	-		Sama_1842	0.30	-2.2
2,242,735	-		Sama_1842	0.30	-1.2
2,242,836	-		Sama_1842	0.44	-1.3
2,242,836	-		Sama_1842	0.44	-1.2
2,242,901	-		Sama_1842	0.53	-0.9
2,242,901	-		Sama_1842	0.53	-1.7
2,242,901	-		Sama_1842	0.53	+0.7
2,243,075	-		Sama_1842	0.76	+0.3
2,243,255	-				-2.6
2,243,277	+				-2.2
2,243,377	-				+1.1
2,243,377	-				-0.8
2,243,377	-				+0.9
2,245,221	-				+3.5
2,245,221	-				+0.1
2,245,270	-				-0.3
2,245,364	+				-1.7
2,245,364	+				+0.2
2,245,365	-				-1.2
2,245,365	-				-1.9
2,245,387	+				+0.5
2,245,387	+				+0.1
2,245,388	-				-0.9
2,245,420	-				+0.7
2,245,420	-				-0.3
2,245,460	+				+1.1
2,245,565	+				+0.9
2,245,566	-				-1.1
2,245,653	-		Sama_1844	0.11	-0.2
2,245,704	-		Sama_1844	0.13	+0.2
2,245,796	+		Sama_1844	0.16	-0.6
2,245,796	+		Sama_1844	0.16	-0.5
2,245,796	+		Sama_1844	0.16	-0.6
2,245,797	-		Sama_1844	0.16	-0.3
2,245,797	-		Sama_1844	0.16	-0.3
2,245,797	+		Sama_1844	0.16	-0.5
2,245,797	-		Sama_1844	0.16	+1.2
2,245,884	-		Sama_1844	0.19	-0.4
2,245,904	+		Sama_1844	0.20	+0.7
2,245,942	-		Sama_1844	0.21	-0.0
2,245,958	+		Sama_1844	0.22	-0.7
2,245,958	+		Sama_1844	0.22	+0.1
2,245,958	+		Sama_1844	0.22	+0.1
2,245,958	+		Sama_1844	0.22	+0.7
2,245,958	+		Sama_1844	0.22	+1.1
2,245,958	+		Sama_1844	0.22	+0.7
2,245,959	-		Sama_1844	0.22	-1.8
2,245,959	-		Sama_1844	0.22	+0.1
2,245,959	-		Sama_1844	0.22	+1.5
2,245,960	+		Sama_1844	0.22	+1.2
2,245,960	+		Sama_1844	0.22	-0.9
2,245,960	+		Sama_1844	0.22	+1.1
2,245,961	-		Sama_1844	0.22	+1.1
2,245,995	-		Sama_1844	0.23	+0.9
2,245,995	-		Sama_1844	0.23	-1.7
2,246,014	+		Sama_1844	0.24	-0.2
2,246,015	-		Sama_1844	0.24	+0.4
2,246,015	-		Sama_1844	0.24	+0.2
2,246,064	-		Sama_1844	0.26	+0.4
2,246,101	-		Sama_1844	0.27	-1.3