Strain Fitness in Shewanella amazonensis SB2B around Sama_R0059

Experiment: Cisplatin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.005 mg/ml
1,963,054	-		Sama_1606	0.60	-0.9
1,963,155	+		Sama_1606	0.66	+0.7
1,963,213	+		Sama_1606	0.69	+0.1
1,963,213	+		Sama_1606	0.69	+1.1
1,963,227	+		Sama_1606	0.70	-0.1
1,963,228	-		Sama_1606	0.70	-0.2
1,963,289	+		Sama_1606	0.74	-2.7
1,963,290	-		Sama_1606	0.74	+1.2
1,963,298	-		Sama_1606	0.74	+1.4
1,963,298	-		Sama_1606	0.74	-0.1
1,963,303	+		Sama_1606	0.74	+0.4
1,963,303	+		Sama_1606	0.74	+0.4
1,963,304	-		Sama_1606	0.75	+0.4
1,963,305	+		Sama_1606	0.75	+0.8
1,963,335	+		Sama_1606	0.76	+0.7
1,963,392	-		Sama_1606	0.80	+0.3
1,963,392	-		Sama_1606	0.80	+1.0
1,963,649	+				-0.1
1,963,649	+				+1.2
1,963,744	+				+0.4
1,963,745	-				+2.2
1,963,745	-				-1.0
1,963,780	-				+0.6
1,963,784	+				-0.8
1,963,832	-				+1.3
1,963,876	+				+1.4
1,963,910	+				-0.6
1,963,910	+				+0.7
1,963,911	-				+1.5
1,964,042	+				-1.0
1,964,042	+				+0.4
1,964,042	+				+1.2
1,964,083	-				-0.3
1,964,128	+				-0.9
1,964,178	-				+0.3
1,964,200	-				-1.2
1,964,283	+				-1.1
1,964,299	-				-0.3
1,964,303	+				-0.6
1,964,303	+				-0.7
1,964,303	+				-0.8
1,964,304	-				-2.0
1,964,491	+				+0.4
1,964,491	+				+0.9
1,964,491	+				+0.5
1,964,491	+				+1.3
1,964,494	+				+0.7
1,964,494	+				+0.7
1,964,551	+				+0.7
1,964,561	+				+0.2
1,964,562	-				+2.2
1,964,585	-				-0.1
1,964,587	-				-0.1
1,964,596	+				+1.2
1,964,596	+				-1.2
1,964,596	+				-0.9
1,964,596	+				-1.3
1,964,596	+				+0.1
1,964,596	+				-0.6
1,964,596	+				-0.7
1,964,596	+				-0.1
1,964,596	+				+0.9
1,964,596	+				-0.3
1,964,596	+				-1.3
1,964,596	+				+0.5
1,964,597	-				+0.8
1,964,597	-				+0.4
1,964,600	+				+0.0
1,964,600	+				+0.7
1,964,600	+				+0.7
1,964,600	+				-0.8
1,964,600	+				+0.4
1,964,601	-				-0.7
1,964,601	-				-0.3
1,964,646	-				-0.7
1,964,655	+				+0.9
1,964,655	+				-2.3
1,964,655	+				+0.2
1,964,707	+				-2.1
1,964,707	+				-0.7
1,964,708	-				-0.9
1,964,708	-				-2.3
1,964,709	+				+0.1
1,964,756	+				-1.9
1,964,756	+				-0.1
1,964,757	-				-1.3
1,964,757	-				-1.7
1,964,757	-				-0.3
1,964,757	-				-2.5
1,964,760	+				-1.6
1,964,760	+				-0.6
1,964,761	-				-1.7
1,964,772	+				-0.7
1,964,800	+				+0.9
1,964,800	+				+0.2
1,964,800	+				-1.1
1,964,800	+				-0.3
1,964,800	+				-1.3
1,964,802	+				+0.4
1,964,957	+		Sama_1607	0.26	-1.9
1,964,957	+		Sama_1607	0.26	-2.3
1,964,957	+		Sama_1607	0.26	+1.2
1,964,957	+		Sama_1607	0.26	-1.8
1,964,990	+		Sama_1607	0.31	+0.1
1,965,023	+		Sama_1607	0.36	-0.1
1,965,023	+		Sama_1607	0.36	-0.7
1,965,023	+		Sama_1607	0.36	+0.1
1,965,023	+		Sama_1607	0.36	-0.6
1,965,023	+		Sama_1607	0.36	-0.7
1,965,023	+		Sama_1607	0.36	-0.2
1,965,024	-		Sama_1607	0.36	-1.1
1,965,024	-		Sama_1607	0.36	-1.7
1,965,024	-		Sama_1607	0.36	-0.9