Strain Fitness in Shewanella amazonensis SB2B around Sama_1048

Experiment: Cisplatin 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cisplatin 0.005 mg/ml
1,266,308	+	recA	Sama_1046	0.75	-1.9
1,266,340	+	recA	Sama_1046	0.78	-2.0
1,266,381	+	recA	Sama_1046	0.82	-1.2
1,266,381	+	recA	Sama_1046	0.82	-1.2
1,266,381	+	recA	Sama_1046	0.82	-0.8
1,266,381	+	recA	Sama_1046	0.82	-3.0
1,266,381	+	recA	Sama_1046	0.82	-2.2
1,266,381	+	recA	Sama_1046	0.82	-2.2
1,266,381	+	recA	Sama_1046	0.82	-2.6
1,266,381	+	recA	Sama_1046	0.82	-2.2
1,266,381	+	recA	Sama_1046	0.82	-0.8
1,266,381	+	recA	Sama_1046	0.82	-3.5
1,266,381	+	recA	Sama_1046	0.82	-2.6
1,266,381	+	recA	Sama_1046	0.82	-2.0
1,266,382	-	recA	Sama_1046	0.82	-1.5
1,266,382	-	recA	Sama_1046	0.82	-1.8
1,266,382	-	recA	Sama_1046	0.82	-0.8
1,266,383	+	recA	Sama_1046	0.82	-1.2
1,266,523	+				-0.3
1,266,523	+				-0.8
1,266,523	+				-1.3
1,266,523	+				-1.6
1,266,640	+		Sama_1047	0.13	-0.2
1,266,640	+		Sama_1047	0.13	-0.6
1,266,640	+		Sama_1047	0.13	+0.3
1,266,641	-		Sama_1047	0.14	+0.5
1,266,703	+		Sama_1047	0.28	-1.2
1,266,704	-		Sama_1047	0.28	+0.2
1,266,704	-		Sama_1047	0.28	+0.4
1,266,704	-		Sama_1047	0.28	-1.2
1,266,704	-		Sama_1047	0.28	+0.4
1,266,710	+		Sama_1047	0.29	-0.2
1,266,798	+		Sama_1047	0.50	-0.3
1,266,799	-		Sama_1047	0.50	-0.8
1,266,814	+		Sama_1047	0.53	+1.0
1,266,823	+		Sama_1047	0.55	+0.5
1,266,823	+		Sama_1047	0.55	+1.2
1,266,824	-		Sama_1047	0.55	-0.8
1,266,860	+		Sama_1047	0.64	+0.5
1,266,860	+		Sama_1047	0.64	-0.7
1,266,861	-		Sama_1047	0.64	-0.2
1,266,861	-		Sama_1047	0.64	+0.5
1,266,937	+		Sama_1047	0.81	+0.7
1,266,937	+		Sama_1047	0.81	-0.2
1,266,938	-		Sama_1047	0.82	+2.4
1,266,938	-		Sama_1047	0.82	-0.3
1,266,938	-		Sama_1047	0.82	+0.8
1,266,938	-		Sama_1047	0.82	-1.8
1,266,939	+		Sama_1047	0.82	+1.6
1,266,939	+		Sama_1047	0.82	+0.4
1,266,939	+		Sama_1047	0.82	+0.4
1,266,939	+		Sama_1047	0.82	+0.4
1,266,940	-		Sama_1047	0.82	-0.0
1,266,944	+		Sama_1047	0.83	+0.2
1,266,945	-		Sama_1047	0.83	-0.8
1,266,945	-		Sama_1047	0.83	-0.9
1,267,004	+				-0.7
1,267,045	+				-1.2
1,269,873	+				+1.7
1,269,876	+				+0.5
1,269,876	+				-0.8
1,270,122	+		Sama_1049	0.19	-2.5