Strain Fitness in Shewanella amazonensis SB2B around Sama_0926
Experiment: Cisplatin 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.005 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,119,697 | + | lspA | Sama_0925 | 0.89 | +1.1 |
1,119,697 | + | lspA | Sama_0925 | 0.89 | -0.7 |
1,119,697 | + | lspA | Sama_0925 | 0.89 | -1.8 |
1,119,700 | + | lspA | Sama_0925 | 0.90 | -0.4 |
1,119,712 | + | -2.1 | |||
1,119,712 | + | +0.4 | |||
1,119,749 | + | +1.1 | |||
1,121,147 | + | +0.2 |
Or see this region's nucleotide sequence