Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4169 and Psest_4170 are separated by 3 nucleotides Psest_4170 and Psest_4171 are separated by 1 nucleotides Psest_4171 and Psest_4172 overlap by 29 nucleotides
Psest_4169: Psest_4169 - ATPase FliI/YscN family, at 4,347,386 to 4,348,720
_4169
Psest_4170: Psest_4170 - Flagellar biosynthesis/type III secretory pathway protein, at 4,348,724 to 4,349,422
_4170
Psest_4171: Psest_4171 - Flagellar motor switch protein, at 4,349,424 to 4,350,491
_4171
Psest_4172: Psest_4172 - flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF), at 4,350,463 to 4,352,139
_4172
Position (kb) 4349
4350
4351 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4348.457 kb on + strand, within Psest_4169 at 4348.506 kb on + strand, within Psest_4169 at 4348.506 kb on + strand, within Psest_4169 at 4348.506 kb on + strand, within Psest_4169 at 4348.506 kb on + strand, within Psest_4169 at 4348.507 kb on - strand, within Psest_4169 at 4348.572 kb on + strand, within Psest_4169 at 4348.572 kb on + strand, within Psest_4169 at 4348.573 kb on - strand, within Psest_4169 at 4348.573 kb on - strand, within Psest_4169 at 4348.573 kb on - strand, within Psest_4169 at 4348.573 kb on - strand, within Psest_4169 at 4348.928 kb on - strand, within Psest_4170 at 4349.079 kb on + strand, within Psest_4170 at 4349.512 kb on - strand at 4349.722 kb on + strand, within Psest_4171 at 4349.722 kb on + strand, within Psest_4171 at 4349.722 kb on + strand, within Psest_4171 at 4349.722 kb on + strand, within Psest_4171 at 4349.722 kb on + strand, within Psest_4171 at 4349.722 kb on + strand, within Psest_4171 at 4349.722 kb on + strand, within Psest_4171 at 4349.722 kb on + strand, within Psest_4171 at 4349.722 kb on + strand, within Psest_4171 at 4349.722 kb on + strand, within Psest_4171 at 4349.722 kb on + strand, within Psest_4171 at 4349.723 kb on - strand, within Psest_4171 at 4349.723 kb on - strand, within Psest_4171 at 4349.723 kb on - strand, within Psest_4171 at 4349.723 kb on - strand, within Psest_4171 at 4349.723 kb on - strand, within Psest_4171 at 4349.723 kb on - strand, within Psest_4171 at 4349.723 kb on - strand, within Psest_4171 at 4350.124 kb on + strand, within Psest_4171 at 4350.124 kb on + strand, within Psest_4171 at 4350.124 kb on + strand, within Psest_4171 at 4350.124 kb on + strand, within Psest_4171 at 4350.124 kb on + strand, within Psest_4171 at 4350.124 kb on + strand, within Psest_4171 at 4350.124 kb on + strand, within Psest_4171 at 4350.125 kb on - strand, within Psest_4171 at 4350.125 kb on - strand, within Psest_4171 at 4350.125 kb on - strand, within Psest_4171 at 4350.125 kb on - strand, within Psest_4171 at 4350.125 kb on - strand, within Psest_4171 at 4350.191 kb on - strand, within Psest_4171 at 4350.191 kb on - strand, within Psest_4171 at 4350.229 kb on + strand, within Psest_4171 at 4350.229 kb on + strand, within Psest_4171 at 4350.229 kb on + strand, within Psest_4171 at 4350.229 kb on + strand, within Psest_4171 at 4350.230 kb on - strand, within Psest_4171 at 4350.230 kb on - strand, within Psest_4171 at 4350.637 kb on - strand, within Psest_4172 at 4350.637 kb on - strand, within Psest_4172 at 4350.637 kb on - strand, within Psest_4172 at 4351.110 kb on - strand, within Psest_4172 at 4351.428 kb on - strand, within Psest_4172 at 4351.473 kb on + strand, within Psest_4172 at 4351.474 kb on - strand, within Psest_4172
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 4,348,457 + Psest_4169 0.80 +1.1 4,348,506 + Psest_4169 0.84 +1.7 4,348,506 + Psest_4169 0.84 +0.1 4,348,506 + Psest_4169 0.84 +0.7 4,348,506 + Psest_4169 0.84 -0.6 4,348,507 - Psest_4169 0.84 -2.0 4,348,572 + Psest_4169 0.89 +2.7 4,348,572 + Psest_4169 0.89 +1.7 4,348,573 - Psest_4169 0.89 +1.7 4,348,573 - Psest_4169 0.89 -1.6 4,348,573 - Psest_4169 0.89 -0.1 4,348,573 - Psest_4169 0.89 -1.6 4,348,928 - Psest_4170 0.29 -0.3 4,349,079 + Psest_4170 0.51 -0.3 4,349,512 - -1.1 4,349,722 + Psest_4171 0.28 -0.1 4,349,722 + Psest_4171 0.28 -0.6 4,349,722 + Psest_4171 0.28 -0.3 4,349,722 + Psest_4171 0.28 +0.7 4,349,722 + Psest_4171 0.28 -0.3 4,349,722 + Psest_4171 0.28 -0.5 4,349,722 + Psest_4171 0.28 -0.9 4,349,722 + Psest_4171 0.28 -0.1 4,349,722 + Psest_4171 0.28 +2.3 4,349,722 + Psest_4171 0.28 +0.1 4,349,722 + Psest_4171 0.28 +0.1 4,349,723 - Psest_4171 0.28 +1.7 4,349,723 - Psest_4171 0.28 +0.7 4,349,723 - Psest_4171 0.28 +0.7 4,349,723 - Psest_4171 0.28 +0.7 4,349,723 - Psest_4171 0.28 -0.5 4,349,723 - Psest_4171 0.28 -0.3 4,349,723 - Psest_4171 0.28 +0.5 4,350,124 + Psest_4171 0.66 +0.1 4,350,124 + Psest_4171 0.66 -0.6 4,350,124 + Psest_4171 0.66 +1.1 4,350,124 + Psest_4171 0.66 +0.1 4,350,124 + Psest_4171 0.66 -1.1 4,350,124 + Psest_4171 0.66 -1.7 4,350,124 + Psest_4171 0.66 +0.7 4,350,125 - Psest_4171 0.66 +0.1 4,350,125 - Psest_4171 0.66 -0.3 4,350,125 - Psest_4171 0.66 -0.3 4,350,125 - Psest_4171 0.66 +0.5 4,350,125 - Psest_4171 0.66 -0.3 4,350,191 - Psest_4171 0.72 -1.1 4,350,191 - Psest_4171 0.72 +0.4 4,350,229 + Psest_4171 0.75 -0.9 4,350,229 + Psest_4171 0.75 +2.7 4,350,229 + Psest_4171 0.75 -0.6 4,350,229 + Psest_4171 0.75 +0.7 4,350,230 - Psest_4171 0.75 -0.6 4,350,230 - Psest_4171 0.75 +1.7 4,350,637 - Psest_4172 0.10 -1.6 4,350,637 - Psest_4172 0.10 +0.1 4,350,637 - Psest_4172 0.10 +0.5 4,351,110 - Psest_4172 0.39 -1.3 4,351,428 - Psest_4172 0.58 -1.3 4,351,473 + Psest_4172 0.60 -2.0 4,351,474 - Psest_4172 0.60 -0.2
Or see this region's nucleotide sequence