Strain Fitness in Marinobacter adhaerens HP15 around HP15_2667

Experiment: Trisodium citrate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2664 and HP15_2665 are separated by 69 nucleotidesHP15_2665 and HP15_2666 are separated by 10 nucleotidesHP15_2666 and HP15_2667 are separated by 97 nucleotidesHP15_2667 and HP15_2668 are separated by 211 nucleotides HP15_2664: HP15_2664 - peptidase M48, Ste24p, at 2,814,268 to 2,815,059 _2664 HP15_2665: HP15_2665 - conserved hypothetical protein, membrane, at 2,815,129 to 2,815,641 _2665 HP15_2666: HP15_2666 - membrane protein, at 2,815,652 to 2,815,930 _2666 HP15_2667: HP15_2667 - ABC-type amino acid transport/signal transduction systems, periplasmic component/domain protein, at 2,816,028 to 2,816,810 _2667 HP15_2668: HP15_2668 - diacylglycerol kinase, catalytic region, at 2,817,022 to 2,817,930 _2668 Position (kb) 2816 2817Strain fitness (log2 ratio) -1 0 1at 2815.056 kb on - strandat 2815.082 kb on - strandat 2815.165 kb on - strandat 2815.165 kb on - strandat 2815.212 kb on + strand, within HP15_2665at 2815.264 kb on - strand, within HP15_2665at 2815.418 kb on + strand, within HP15_2665at 2815.452 kb on + strand, within HP15_2665at 2815.452 kb on + strand, within HP15_2665at 2815.452 kb on + strand, within HP15_2665at 2815.460 kb on - strand, within HP15_2665at 2815.460 kb on - strand, within HP15_2665at 2815.460 kb on - strand, within HP15_2665at 2815.460 kb on - strand, within HP15_2665at 2815.486 kb on - strand, within HP15_2665at 2815.588 kb on + strand, within HP15_2665at 2815.745 kb on + strand, within HP15_2666at 2815.943 kb on + strandat 2816.024 kb on + strandat 2816.249 kb on + strand, within HP15_2667at 2816.483 kb on + strand, within HP15_2667at 2816.488 kb on + strand, within HP15_2667at 2816.496 kb on - strand, within HP15_2667at 2816.496 kb on - strand, within HP15_2667at 2816.524 kb on - strand, within HP15_2667at 2816.534 kb on - strand, within HP15_2667at 2816.580 kb on + strand, within HP15_2667at 2816.583 kb on - strand, within HP15_2667at 2816.583 kb on - strand, within HP15_2667at 2816.610 kb on + strand, within HP15_2667at 2816.785 kb on - strandat 2816.812 kb on + strandat 2816.812 kb on + strandat 2816.820 kb on - strandat 2817.144 kb on - strand, within HP15_2668at 2817.161 kb on + strand, within HP15_2668at 2817.216 kb on - strand, within HP15_2668at 2817.308 kb on - strand, within HP15_2668at 2817.560 kb on - strand, within HP15_2668at 2817.623 kb on + strand, within HP15_2668at 2817.623 kb on + strand, within HP15_2668at 2817.635 kb on + strand, within HP15_2668at 2817.681 kb on - strand, within HP15_2668at 2817.704 kb on - strand, within HP15_2668at 2817.762 kb on - strand, within HP15_2668at 2817.776 kb on - strand, within HP15_2668at 2817.799 kb on - strand, within HP15_2668

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Per-strain Table

Position Strand Gene LocusTag Fraction Trisodium citrate (C)
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2,815,056 - +0.1
2,815,082 - -0.9
2,815,165 - +0.6
2,815,165 - -0.4
2,815,212 + HP15_2665 0.16 -0.4
2,815,264 - HP15_2665 0.26 -0.3
2,815,418 + HP15_2665 0.56 -0.8
2,815,452 + HP15_2665 0.63 -0.2
2,815,452 + HP15_2665 0.63 +0.4
2,815,452 + HP15_2665 0.63 +0.1
2,815,460 - HP15_2665 0.65 -0.3
2,815,460 - HP15_2665 0.65 -0.5
2,815,460 - HP15_2665 0.65 -0.3
2,815,460 - HP15_2665 0.65 +0.3
2,815,486 - HP15_2665 0.70 +0.1
2,815,588 + HP15_2665 0.89 +0.4
2,815,745 + HP15_2666 0.33 -0.3
2,815,943 + +0.2
2,816,024 + -0.7
2,816,249 + HP15_2667 0.28 -0.2
2,816,483 + HP15_2667 0.58 -0.1
2,816,488 + HP15_2667 0.59 -1.2
2,816,496 - HP15_2667 0.60 +0.6
2,816,496 - HP15_2667 0.60 +0.1
2,816,524 - HP15_2667 0.63 +0.2
2,816,534 - HP15_2667 0.65 +0.9
2,816,580 + HP15_2667 0.70 +0.2
2,816,583 - HP15_2667 0.71 -0.4
2,816,583 - HP15_2667 0.71 -0.7
2,816,610 + HP15_2667 0.74 +0.0
2,816,785 - -0.3
2,816,812 + -0.4
2,816,812 + +0.6
2,816,820 - +1.2
2,817,144 - HP15_2668 0.13 +1.0
2,817,161 + HP15_2668 0.15 +0.7
2,817,216 - HP15_2668 0.21 +0.2
2,817,308 - HP15_2668 0.31 +0.2
2,817,560 - HP15_2668 0.59 -0.1
2,817,623 + HP15_2668 0.66 +1.2
2,817,623 + HP15_2668 0.66 +0.6
2,817,635 + HP15_2668 0.67 -1.0
2,817,681 - HP15_2668 0.72 -0.9
2,817,704 - HP15_2668 0.75 -0.5
2,817,762 - HP15_2668 0.81 +0.4
2,817,776 - HP15_2668 0.83 -0.1
2,817,799 - HP15_2668 0.85 +0.9

Or see this region's nucleotide sequence