Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0157 and Psest_0158 are separated by 230 nucleotides Psest_0158 and Psest_0159 are separated by 3 nucleotides Psest_0159 and Psest_0160 are separated by 2 nucleotides
Psest_0157: Psest_0157 - ABC-type amino acid transport/signal transduction systems, periplasmic component/domain, at 155,327 to 156,076
_0157
Psest_0158: Psest_0158 - ABC-type amino acid transport/signal transduction systems, periplasmic component/domain, at 156,307 to 157,053
_0158
Psest_0159: Psest_0159 - Uncharacterized protein conserved in bacteria, at 157,057 to 157,848
_0159
Psest_0160: Psest_0160 - C-terminal peptidase (prc), at 157,851 to 159,170
_0160
Position (kb) 157
158 Strain fitness (log2 ratio) -1
0
1
2 at 156.069 kb on - strand at 156.069 kb on - strand at 156.323 kb on + strand at 156.344 kb on + strand at 156.345 kb on - strand at 156.345 kb on - strand at 156.345 kb on - strand at 156.442 kb on + strand, within Psest_0158 at 156.443 kb on - strand, within Psest_0158 at 156.443 kb on - strand, within Psest_0158 at 156.443 kb on - strand, within Psest_0158 at 156.443 kb on - strand, within Psest_0158 at 156.553 kb on + strand, within Psest_0158 at 156.554 kb on - strand, within Psest_0158 at 156.554 kb on - strand, within Psest_0158 at 156.554 kb on - strand, within Psest_0158 at 156.652 kb on - strand, within Psest_0158 at 156.736 kb on + strand, within Psest_0158 at 156.736 kb on + strand, within Psest_0158 at 156.874 kb on + strand, within Psest_0158 at 156.987 kb on - strand at 157.059 kb on - strand at 157.065 kb on - strand at 157.435 kb on + strand, within Psest_0159 at 157.435 kb on + strand, within Psest_0159 at 157.436 kb on - strand, within Psest_0159 at 157.436 kb on - strand, within Psest_0159 at 157.537 kb on + strand, within Psest_0159 at 157.537 kb on + strand, within Psest_0159 at 157.732 kb on + strand, within Psest_0159 at 157.790 kb on + strand at 157.791 kb on - strand at 157.792 kb on + strand at 157.793 kb on - strand at 158.114 kb on - strand, within Psest_0160
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 156,069 - +0.7 156,069 - +1.1 156,323 + -1.1 156,344 + +0.9 156,345 - -0.8 156,345 - +1.7 156,345 - +0.5 156,442 + Psest_0158 0.18 +1.7 156,443 - Psest_0158 0.18 -0.5 156,443 - Psest_0158 0.18 -1.3 156,443 - Psest_0158 0.18 +0.4 156,443 - Psest_0158 0.18 -1.0 156,553 + Psest_0158 0.33 +0.1 156,554 - Psest_0158 0.33 +0.4 156,554 - Psest_0158 0.33 -0.9 156,554 - Psest_0158 0.33 +0.0 156,652 - Psest_0158 0.46 +0.5 156,736 + Psest_0158 0.57 -1.5 156,736 + Psest_0158 0.57 +0.9 156,874 + Psest_0158 0.76 -0.4 156,987 - +0.0 157,059 - +0.4 157,065 - -1.1 157,435 + Psest_0159 0.48 -0.6 157,435 + Psest_0159 0.48 -1.2 157,436 - Psest_0159 0.48 -0.3 157,436 - Psest_0159 0.48 -0.0 157,537 + Psest_0159 0.61 -0.8 157,537 + Psest_0159 0.61 -1.3 157,732 + Psest_0159 0.85 -1.3 157,790 + -0.1 157,791 - +0.3 157,792 + +0.1 157,793 - -0.2 158,114 - Psest_0160 0.20 +2.7
Or see this region's nucleotide sequence