Strain Fitness in Shewanella amazonensis SB2B

Strain Fitness in Shewanella amazonensis SB2B around Sama_2833

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	Cisplatin 0.0025 mg/ml
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3,369,153	+			+0.8
3,369,153	+			-0.1
3,369,153	+			-0.4
3,369,153	+			+0.2
3,369,153	+			+1.0
3,369,153	+			-0.5
3,369,153	+			-1.1
3,369,153	+			+0.1
3,369,153	+			-1.2
3,369,154	-			+0.2
3,369,154	-			-0.5
3,369,154	-			-0.4
3,369,154	-			+0.4
3,369,158	+			+0.5
3,369,158	+			-0.1
3,369,158	+			-0.5
3,369,159	-			-1.0
3,369,159	-			+0.2
3,369,238	+			+0.1
3,369,261	-			-0.1
3,369,281	+			+0.2
3,369,282	-			-0.3
3,369,334	-	Sama_2832	0.12	+1.1
3,369,340	-	Sama_2832	0.14	-0.6
3,369,384	+	Sama_2832	0.28	+0.8
3,369,385	-	Sama_2832	0.28	-1.5
3,369,385	-	Sama_2832	0.28	-1.5
3,369,423	+	Sama_2832	0.40	-0.6
3,369,423	+	Sama_2832	0.40	-1.0
3,369,424	-	Sama_2832	0.40	-0.7
3,369,424	-	Sama_2832	0.40	-0.5
3,369,537	+	Sama_2832	0.75	-1.1
3,369,538	-	Sama_2832	0.76	+0.0
3,369,589	-			-1.5
3,369,633	-			+0.4
3,369,669	-			+0.1
3,369,669	-			+0.8
3,369,731	+			-0.5
3,369,731	+			-1.4
3,369,771	+	Sama_2833	0.15	-0.0
3,369,771	+	Sama_2833	0.15	-0.0
3,369,813	+	Sama_2833	0.22	-0.9
3,369,813	+	Sama_2833	0.22	-0.9
3,369,813	+	Sama_2833	0.22	+0.7
3,369,813	+	Sama_2833	0.22	+0.5
3,369,814	-	Sama_2833	0.22	-0.3
3,369,814	-	Sama_2833	0.22	+0.1
3,369,814	-	Sama_2833	0.22	+1.0
3,369,814	-	Sama_2833	0.22	+0.5
3,369,815	+	Sama_2833	0.22	-0.7
3,369,815	+	Sama_2833	0.22	-1.8
3,369,815	+	Sama_2833	0.22	+0.5
3,369,815	+	Sama_2833	0.22	-0.6
3,369,815	+	Sama_2833	0.22	-0.6
3,369,815	+	Sama_2833	0.22	-1.1
3,369,815	+	Sama_2833	0.22	-1.4
3,369,815	+	Sama_2833	0.22	-0.5
3,369,815	+	Sama_2833	0.22	-2.1
3,369,815	+	Sama_2833	0.22	-0.1
3,369,815	+	Sama_2833	0.22	-1.9
3,369,815	+	Sama_2833	0.22	-0.6
3,369,816	-	Sama_2833	0.22	+0.2
3,369,816	-	Sama_2833	0.22	-0.9
3,369,816	-	Sama_2833	0.22	+0.2
3,369,816	-	Sama_2833	0.22	-0.1
3,369,816	-	Sama_2833	0.22	+0.1
3,369,816	-	Sama_2833	0.22	-1.4
3,369,816	-	Sama_2833	0.22	+2.1
3,369,816	-	Sama_2833	0.22	+0.4
3,369,816	-	Sama_2833	0.22	-0.1
3,369,816	-	Sama_2833	0.22	-0.1
3,369,837	+	Sama_2833	0.25	+0.3
3,369,837	+	Sama_2833	0.25	+0.1
3,369,837	+	Sama_2833	0.25	+0.0
3,369,838	-	Sama_2833	0.26	-0.1
3,369,838	-	Sama_2833	0.26	-0.2
3,369,838	-	Sama_2833	0.26	-0.7
3,370,061	-	Sama_2833	0.61	+0.1
3,370,137	-	Sama_2833	0.73	-0.9
3,370,139	+	Sama_2833	0.74	-0.3
3,370,140	-	Sama_2833	0.74	+0.5
3,370,148	-	Sama_2833	0.75	-1.9
3,370,148	-	Sama_2833	0.75	-0.5
3,370,148	-	Sama_2833	0.75	-0.1
3,370,148	-	Sama_2833	0.75	+0.2
3,370,149	+	Sama_2833	0.75	-0.5
3,370,149	+	Sama_2833	0.75	-0.4
3,370,149	+	Sama_2833	0.75	+0.8
3,370,149	+	Sama_2833	0.75	-0.3
3,370,149	+	Sama_2833	0.75	-0.3
3,370,149	+	Sama_2833	0.75	+0.4
3,370,150	-	Sama_2833	0.75	-0.6
3,370,150	-	Sama_2833	0.75	-0.9
3,370,150	-	Sama_2833	0.75	-0.1
3,370,150	-	Sama_2833	0.75	+2.1
3,370,150	-	Sama_2833	0.75	-0.7
3,370,150	-	Sama_2833	0.75	+0.0
3,370,150	-	Sama_2833	0.75	+0.1
3,370,150	-	Sama_2833	0.75	-0.0
3,370,150	-	Sama_2833	0.75	+0.6
3,370,157	+	Sama_2833	0.76	-1.2
3,370,187	+	Sama_2833	0.81	+0.1
3,370,214	+	Sama_2833	0.85	-0.8
3,370,214	+	Sama_2833	0.85	+0.1
3,370,214	+	Sama_2833	0.85	-1.5
3,370,254	-			-0.2
3,370,254	-			-0.2
3,370,254	-			-0.0
3,370,305	-			-2.1
3,370,305	-			+1.1
3,370,305	-			-0.6
3,370,318	+			+0.6
3,370,318	+			+2.1
3,370,318	+			-0.4
3,370,319	-			-0.3
3,370,319	-			-0.2
3,370,356	+			+1.1
3,370,368	-			+0.4
3,370,425	+			-0.7
3,370,426	-			+0.1
3,370,437	+			+0.2
3,370,437	+			-0.2
3,370,437	+			-1.9
3,370,438	-			-0.5
3,370,438	-			+0.5
3,370,438	-			+0.5
3,370,438	-			+1.5
3,370,438	-			-0.8
3,370,439	+			-0.9
3,370,439	+			+0.3
3,370,439	+			-0.7
3,370,439	+			-0.9
3,370,439	+			+0.9
3,370,439	+			-1.1
3,370,439	+			-1.4
3,370,440	-			+2.7
3,370,440	-			-1.5
3,370,440	-			+1.3
3,370,440	-			-1.0
3,370,440	-			+0.1
3,370,440	-			+0.3
3,370,440	-			+0.1
3,370,440	-			-0.3
3,370,466	+			-0.9
3,370,467	-			-0.4
3,370,467	-			-1.1
3,370,473	+			-0.7
3,370,473	+			-1.6
3,370,474	-			+1.8
3,370,474	-			+0.4
3,370,474	-			+1.1
3,370,474	-			-1.6
3,370,474	-			+1.6
3,370,489	-			+0.1
3,370,489	-			-0.3
3,370,489	-			+0.4
3,370,489	-			-0.1
3,370,556	-			-0.2
3,370,569	+			-0.9
3,370,569	+			+0.8
3,370,572	+			-2.2
3,370,572	+			+0.7
3,370,573	-			-0.6
3,370,573	-			-1.1
3,370,573	-			-0.5
3,370,642	+			+1.4
3,370,642	+			+0.5
3,370,642	+			-0.4
3,370,645	-			-0.5
3,370,645	-			-1.1
3,370,645	-			-2.2
3,370,657	-			+0.2
3,370,663	+			-0.6
3,370,746	+			-0.6
3,370,746	+			-0.2
3,370,746	+			+0.1
3,370,746	+			+0.2
3,370,746	+			+0.9
3,370,746	+			-1.4
3,370,746	+			-1.0
3,370,747	-			-1.6
3,370,747	-			+0.5
3,370,747	-			-0.5
3,370,747	-			+1.1
3,370,747	-			+0.6
3,370,747	-			-0.5
3,370,747	-			-1.0
3,370,750	+			-0.6
3,370,750	+			-0.5
3,370,750	+			+0.7
3,370,750	+			+1.5
3,370,750	+			-0.9
3,370,750	+			+0.5
3,370,751	-			+1.7
3,370,751	-			+0.7
3,370,751	-			+0.5
3,370,783	-			-0.9
3,370,783	-			-0.4
3,370,803	+			-0.9
3,370,849	-	Sama_2834	0.12	-0.8
3,370,886	-	Sama_2834	0.14	-0.1
3,370,920	+	Sama_2834	0.17	-1.5
3,370,920	+	Sama_2834	0.17	+0.5
3,370,921	-	Sama_2834	0.17	-0.5
3,370,921	-	Sama_2834	0.17	+0.1
3,370,921	-	Sama_2834	0.17	+0.3
3,370,988	+	Sama_2834	0.21	-0.1
3,370,989	-	Sama_2834	0.21	-0.2
3,370,993	+	Sama_2834	0.22	-1.2
3,370,994	-	Sama_2834	0.22	+1.1
3,370,994	-	Sama_2834	0.22	-0.8
3,370,994	-	Sama_2834	0.22	-0.6
3,370,994	-	Sama_2834	0.22	-1.5
3,371,063	+	Sama_2834	0.27	-0.1
3,371,189	+	Sama_2834	0.35	+1.1
3,371,190	-	Sama_2834	0.36	+0.3
3,371,209	-	Sama_2834	0.37	+0.2
3,371,267	+	Sama_2834	0.41	-0.2

Or see this region's nucleotide sequence