Strain Fitness in Shewanella amazonensis SB2B around Sama_0879
Experiment: Cisplatin 0.0025 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cisplatin 0.0025 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,067,969 | + | Sama_0878 | 0.60 | +0.9 | |
1,068,310 | + | Sama_0878 | 0.79 | -1.2 | |
1,068,418 | + | Sama_0878 | 0.85 | +1.8 | |
1,068,418 | + | Sama_0878 | 0.85 | +0.1 | |
1,068,419 | - | Sama_0878 | 0.85 | +1.1 | |
1,068,493 | + | Sama_0878 | 0.89 | -0.7 | |
1,068,532 | + | +0.1 | |||
1,068,607 | + | +0.5 | |||
1,068,697 | + | -0.1 | |||
1,068,697 | + | +0.4 | |||
1,068,697 | + | -1.2 | |||
1,068,709 | + | -0.5 | |||
1,068,720 | + | +0.1 | |||
1,068,720 | + | +0.8 | |||
1,068,735 | + | -0.2 |
Or see this region's nucleotide sequence