Strain Fitness in Shewanella amazonensis SB2B around Sama_3588

Experiment: copper (II) chloride 0.16 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 0.16 mM
4,219,833	+		Sama_3587	0.12	-0.2
4,219,834	-		Sama_3587	0.12	-0.5
4,219,902	+		Sama_3587	0.18	-0.5
4,219,902	+		Sama_3587	0.18	-0.7
4,219,902	+		Sama_3587	0.18	+0.3
4,219,903	-		Sama_3587	0.18	-0.6
4,219,903	-		Sama_3587	0.18	-1.0
4,219,903	-		Sama_3587	0.18	-0.1
4,219,903	-		Sama_3587	0.18	-0.4
4,219,903	-		Sama_3587	0.18	-0.7
4,219,918	+		Sama_3587	0.19	-1.2
4,219,918	+		Sama_3587	0.19	-1.0
4,219,919	-		Sama_3587	0.20	+1.5
4,219,919	-		Sama_3587	0.20	-0.1
4,219,919	-		Sama_3587	0.20	-0.9
4,219,935	+		Sama_3587	0.21	+0.7
4,219,975	+		Sama_3587	0.24	-0.7
4,219,976	-		Sama_3587	0.25	-1.0
4,220,016	+		Sama_3587	0.28	-0.4
4,220,016	+		Sama_3587	0.28	-0.7
4,220,083	-		Sama_3587	0.34	+0.6
4,220,083	-		Sama_3587	0.34	+0.5
4,220,083	-		Sama_3587	0.34	+2.6
4,220,097	+		Sama_3587	0.35	-0.3
4,220,097	+		Sama_3587	0.35	+0.6
4,220,098	-		Sama_3587	0.35	+0.3
4,220,098	-		Sama_3587	0.35	-1.3
4,220,197	-		Sama_3587	0.44	+0.2
4,220,232	+		Sama_3587	0.47	+0.0
4,220,233	-		Sama_3587	0.47	+0.5
4,220,244	+		Sama_3587	0.48	+0.0
4,220,244	+		Sama_3587	0.48	-0.2
4,220,244	+		Sama_3587	0.48	-0.4
4,220,244	+		Sama_3587	0.48	-0.9
4,220,244	+		Sama_3587	0.48	-0.5
4,220,244	+		Sama_3587	0.48	+1.6
4,220,245	-		Sama_3587	0.48	+0.3
4,220,245	-		Sama_3587	0.48	+0.1
4,220,245	-		Sama_3587	0.48	-1.1
4,220,245	-		Sama_3587	0.48	+0.5
4,220,245	-		Sama_3587	0.48	-0.2
4,220,245	-		Sama_3587	0.48	+0.2
4,220,245	-		Sama_3587	0.48	+0.1
4,220,257	+		Sama_3587	0.49	+0.0
4,220,257	+		Sama_3587	0.49	-0.1
4,220,257	+		Sama_3587	0.49	-0.2
4,220,257	+		Sama_3587	0.49	-0.2
4,220,257	+		Sama_3587	0.49	-0.0
4,220,258	-		Sama_3587	0.50	-0.2
4,220,258	-		Sama_3587	0.50	-0.5
4,220,258	-		Sama_3587	0.50	+0.0
4,220,258	-		Sama_3587	0.50	-0.3
4,220,261	-		Sama_3587	0.50	-0.0
4,220,281	+		Sama_3587	0.52	+0.4
4,220,281	+		Sama_3587	0.52	-0.6
4,220,281	+		Sama_3587	0.52	-0.1
4,220,281	+		Sama_3587	0.52	-0.5
4,220,281	+		Sama_3587	0.52	+1.2
4,220,281	+		Sama_3587	0.52	+1.8
4,220,282	-		Sama_3587	0.52	+0.4
4,220,282	-		Sama_3587	0.52	-0.4
4,220,282	-		Sama_3587	0.52	-0.3
4,220,282	-		Sama_3587	0.52	-0.2
4,220,282	-		Sama_3587	0.52	-1.1
4,220,282	-		Sama_3587	0.52	+1.3
4,220,282	-		Sama_3587	0.52	+0.3
4,220,295	+		Sama_3587	0.53	+1.4
4,220,295	+		Sama_3587	0.53	+0.3
4,220,295	+		Sama_3587	0.53	-0.6
4,220,315	+		Sama_3587	0.55	-0.0
4,220,315	+		Sama_3587	0.55	+1.1
4,220,315	+		Sama_3587	0.55	-1.4
4,220,316	-		Sama_3587	0.55	+0.5
4,220,316	-		Sama_3587	0.55	+1.2
4,220,316	-		Sama_3587	0.55	-2.0
4,220,316	-		Sama_3587	0.55	-1.3
4,220,316	-		Sama_3587	0.55	-0.1
4,220,316	-		Sama_3587	0.55	-0.3
4,220,316	-		Sama_3587	0.55	+0.0
4,220,316	-		Sama_3587	0.55	-0.6
4,220,316	-		Sama_3587	0.55	-1.4
4,220,316	-		Sama_3587	0.55	-1.0
4,220,316	-		Sama_3587	0.55	-0.9
4,220,316	-		Sama_3587	0.55	+0.8
4,220,316	-		Sama_3587	0.55	+0.7
4,220,403	+		Sama_3587	0.62	+0.4
4,220,403	+		Sama_3587	0.62	+1.2
4,220,403	+		Sama_3587	0.62	+0.4
4,220,403	+		Sama_3587	0.62	-0.5
4,220,404	-		Sama_3587	0.62	+0.2
4,220,404	-		Sama_3587	0.62	-0.2
4,220,404	-		Sama_3587	0.62	-1.2
4,220,404	-		Sama_3587	0.62	-1.1
4,220,418	+		Sama_3587	0.64	-0.6
4,220,418	+		Sama_3587	0.64	+0.3
4,220,419	-		Sama_3587	0.64	-1.4
4,220,419	-		Sama_3587	0.64	-0.7
4,220,462	+		Sama_3587	0.68	-1.1
4,220,588	+		Sama_3587	0.79	+0.4
4,220,588	+		Sama_3587	0.79	+0.6
4,220,588	+		Sama_3587	0.79	+0.3
4,220,588	+		Sama_3587	0.79	-0.6
4,220,665	-		Sama_3587	0.86	+0.5
4,220,731	+				+1.2
4,220,731	+				+0.1
4,220,749	+				+0.4
4,220,749	+				-1.3
4,220,749	+				+0.5
4,220,750	-				-1.0
4,220,750	-				-0.2
4,220,750	-				+0.3
4,220,750	-				+1.0
4,220,750	-				+0.6
4,220,750	-				-1.7
4,220,817	+				+0.8
4,220,817	+				-0.4
4,220,818	-				-0.7
4,220,818	-				-0.6
4,220,818	-				-0.0
4,220,906	-				-0.1
4,220,953	+		Sama_3588	0.14	+0.3
4,220,953	+		Sama_3588	0.14	+0.1
4,220,957	+		Sama_3588	0.15	+0.2
4,220,957	+		Sama_3588	0.15	-0.3
4,220,957	+		Sama_3588	0.15	+0.7
4,220,957	+		Sama_3588	0.15	+0.5
4,220,957	+		Sama_3588	0.15	+0.4
4,220,957	+		Sama_3588	0.15	-1.5
4,220,957	+		Sama_3588	0.15	+0.2
4,220,957	+		Sama_3588	0.15	+0.1
4,220,957	+		Sama_3588	0.15	+0.5
4,220,957	+		Sama_3588	0.15	+0.1
4,220,957	+		Sama_3588	0.15	-0.9
4,220,957	+		Sama_3588	0.15	+0.3
4,220,957	+		Sama_3588	0.15	-0.8
4,220,957	+		Sama_3588	0.15	-1.0
4,220,957	+		Sama_3588	0.15	-0.4
4,220,957	+		Sama_3588	0.15	+0.4
4,220,958	-		Sama_3588	0.15	-0.8
4,220,958	-		Sama_3588	0.15	+1.2
4,220,958	-		Sama_3588	0.15	-1.3
4,220,958	-		Sama_3588	0.15	-0.4
4,220,958	-		Sama_3588	0.15	-0.2
4,220,958	-		Sama_3588	0.15	-0.2
4,220,958	-		Sama_3588	0.15	-0.6
4,220,958	-		Sama_3588	0.15	-0.9
4,220,958	-		Sama_3588	0.15	-1.3
4,220,958	-		Sama_3588	0.15	+0.4
4,221,118	+		Sama_3588	0.31	+0.1
4,221,168	+		Sama_3588	0.36	+0.5
4,221,168	+		Sama_3588	0.36	-1.0
4,221,168	+		Sama_3588	0.36	+0.2
4,221,168	+		Sama_3588	0.36	-0.6
4,221,168	+		Sama_3588	0.36	+0.6
4,221,169	-		Sama_3588	0.36	-0.7
4,221,169	-		Sama_3588	0.36	-0.4
4,221,169	-		Sama_3588	0.36	-0.3
4,221,187	+		Sama_3588	0.38	+0.6
4,221,187	+		Sama_3588	0.38	-0.8
4,221,187	+		Sama_3588	0.38	+0.4
4,221,187	+		Sama_3588	0.38	-0.4
4,221,188	-		Sama_3588	0.38	-0.3
4,221,188	-		Sama_3588	0.38	+0.4
4,221,188	-		Sama_3588	0.38	+0.2
4,221,188	-		Sama_3588	0.38	-0.4
4,221,188	-		Sama_3588	0.38	+0.3
4,221,188	-		Sama_3588	0.38	+0.9
4,221,296	+		Sama_3588	0.50	-0.3
4,221,296	+		Sama_3588	0.50	+0.2
4,221,297	-		Sama_3588	0.50	-0.4
4,221,297	-		Sama_3588	0.50	-0.1
4,221,297	-		Sama_3588	0.50	-0.5
4,221,297	-		Sama_3588	0.50	+0.6
4,221,297	-		Sama_3588	0.50	-1.3
4,221,297	-		Sama_3588	0.50	+0.7
4,221,381	+		Sama_3588	0.58	+1.7
4,221,381	+		Sama_3588	0.58	-0.4
4,221,381	+		Sama_3588	0.58	-0.8
4,221,382	-		Sama_3588	0.58	+0.5
4,221,382	-		Sama_3588	0.58	-0.2
4,221,382	-		Sama_3588	0.58	-0.1
4,221,401	+		Sama_3588	0.60	+0.9
4,221,401	+		Sama_3588	0.60	-0.4
4,221,401	+		Sama_3588	0.60	-1.8
4,221,402	-		Sama_3588	0.60	-0.1
4,221,402	-		Sama_3588	0.60	+0.7
4,221,418	+		Sama_3588	0.62	-0.5
4,221,418	+		Sama_3588	0.62	+0.5
4,221,418	+		Sama_3588	0.62	-0.2
4,221,418	+		Sama_3588	0.62	-0.9
4,221,418	+		Sama_3588	0.62	-0.3
4,221,418	+		Sama_3588	0.62	-0.1
4,221,418	+		Sama_3588	0.62	+0.3
4,221,419	-		Sama_3588	0.62	-0.1
4,221,419	-		Sama_3588	0.62	+1.2
4,221,421	+		Sama_3588	0.62	-0.6
4,221,421	+		Sama_3588	0.62	-0.6
4,221,421	+		Sama_3588	0.62	+0.2
4,221,421	+		Sama_3588	0.62	+0.9
4,221,421	+		Sama_3588	0.62	-0.6
4,221,421	+		Sama_3588	0.62	+1.2
4,221,422	-		Sama_3588	0.63	-0.5
4,221,422	-		Sama_3588	0.63	+1.2
4,221,422	-		Sama_3588	0.63	-0.2
4,221,422	-		Sama_3588	0.63	-1.0
4,221,422	-		Sama_3588	0.63	-0.6
4,221,422	-		Sama_3588	0.63	+0.2
4,221,435	+		Sama_3588	0.64	-0.1
4,221,435	+		Sama_3588	0.64	+0.3
4,221,435	+		Sama_3588	0.64	+0.9
4,221,435	+		Sama_3588	0.64	-0.3
4,221,435	+		Sama_3588	0.64	+0.0
4,221,436	-		Sama_3588	0.64	+0.6
4,221,436	-		Sama_3588	0.64	+1.1
4,221,436	-		Sama_3588	0.64	+0.4
4,221,436	-		Sama_3588	0.64	-0.6
4,221,436	-		Sama_3588	0.64	-0.0
4,221,436	-		Sama_3588	0.64	+1.2
4,221,483	+		Sama_3588	0.69	+0.2
4,221,507	+		Sama_3588	0.71	-1.3
4,221,507	+		Sama_3588	0.71	+0.2
4,221,507	+		Sama_3588	0.71	-0.4
4,221,507	+		Sama_3588	0.71	-1.1
4,221,508	-		Sama_3588	0.71	+1.0
4,221,508	-		Sama_3588	0.71	+0.4
4,221,508	-		Sama_3588	0.71	-0.4
4,221,508	-		Sama_3588	0.71	-0.0
4,221,508	-		Sama_3588	0.71	+0.8
4,221,586	+		Sama_3588	0.79	+0.0
4,221,586	+		Sama_3588	0.79	-0.2
4,221,587	-		Sama_3588	0.80	+0.5
4,221,604	+		Sama_3588	0.81	+0.6
4,221,605	-		Sama_3588	0.81	+0.2
4,221,605	-		Sama_3588	0.81	-1.0
4,221,651	+		Sama_3588	0.86	+2.2
4,221,651	+		Sama_3588	0.86	+0.8
4,221,652	-		Sama_3588	0.86	-0.2
4,221,652	-		Sama_3588	0.86	-0.6
4,221,722	-				-1.3
4,221,722	-				+1.2
4,221,722	-				-0.5
4,221,865	+				-0.7
4,221,865	+				-0.9
4,221,865	+				+0.5
4,221,866	-				-0.6
4,221,866	-				+0.4
4,221,894	+		Sama_3589	0.12	-0.4
4,221,895	-		Sama_3589	0.12	-0.8
4,221,895	-		Sama_3589	0.12	-0.0
4,221,901	+		Sama_3589	0.13	+0.1
4,221,901	+		Sama_3589	0.13	-0.4
4,221,901	+		Sama_3589	0.13	+1.2
4,221,902	-		Sama_3589	0.13	+0.6
4,221,902	-		Sama_3589	0.13	+0.1
4,221,902	-		Sama_3589	0.13	+0.0
4,221,902	-		Sama_3589	0.13	+0.2
4,222,008	-		Sama_3589	0.24	-0.1
4,222,008	-		Sama_3589	0.24	+0.1
4,222,030	+		Sama_3589	0.26	-1.1
4,222,030	+		Sama_3589	0.26	-2.0
4,222,030	+		Sama_3589	0.26	+1.8
4,222,030	+		Sama_3589	0.26	-1.0
4,222,030	+		Sama_3589	0.26	-1.3
4,222,030	+		Sama_3589	0.26	-1.1
4,222,030	+		Sama_3589	0.26	-0.6
4,222,031	-		Sama_3589	0.26	+1.4
4,222,031	-		Sama_3589	0.26	+1.2
4,222,042	+		Sama_3589	0.28	-1.0
4,222,042	+		Sama_3589	0.28	+1.2
4,222,042	+		Sama_3589	0.28	+0.1
4,222,042	+		Sama_3589	0.28	-0.2
4,222,042	+		Sama_3589	0.28	+0.8
4,222,042	+		Sama_3589	0.28	-0.2
4,222,042	+		Sama_3589	0.28	-2.1
4,222,043	-		Sama_3589	0.28	+0.1
4,222,043	-		Sama_3589	0.28	-0.6
4,222,043	-		Sama_3589	0.28	+0.2
4,222,043	-		Sama_3589	0.28	+0.8
4,222,043	-		Sama_3589	0.28	+0.2
4,222,152	+		Sama_3589	0.39	+1.0
4,222,153	-		Sama_3589	0.39	+0.1
4,222,163	+		Sama_3589	0.40	-0.6
4,222,164	-		Sama_3589	0.40	+0.6
4,222,224	+		Sama_3589	0.46	+0.9
4,222,224	+		Sama_3589	0.46	-1.0
4,222,224	+		Sama_3589	0.46	-1.9
4,222,224	+		Sama_3589	0.46	+0.4
4,222,224	+		Sama_3589	0.46	+0.7
4,222,225	-		Sama_3589	0.47	-0.2
4,222,225	-		Sama_3589	0.47	-0.2
4,222,225	-		Sama_3589	0.47	-0.1
4,222,251	+		Sama_3589	0.49	-0.4
4,222,251	+		Sama_3589	0.49	+0.3
4,222,251	+		Sama_3589	0.49	-0.8
4,222,251	+		Sama_3589	0.49	-0.3
4,222,375	+		Sama_3589	0.62	-0.0
4,222,375	+		Sama_3589	0.62	-0.2
4,222,376	-		Sama_3589	0.62	-0.0
4,222,543	-		Sama_3589	0.80	+0.1
4,222,543	-		Sama_3589	0.80	-0.2
4,222,559	+		Sama_3589	0.81	-0.1
4,222,559	+		Sama_3589	0.81	+0.3
4,222,559	+		Sama_3589	0.81	-2.1
4,222,559	+		Sama_3589	0.81	-0.6
4,222,559	+		Sama_3589	0.81	+0.3
4,222,560	-		Sama_3589	0.81	+0.1
4,222,560	-		Sama_3589	0.81	-0.4
4,222,560	-		Sama_3589	0.81	+1.4
4,222,560	-		Sama_3589	0.81	-0.9
4,222,560	-		Sama_3589	0.81	-0.1
4,222,587	+		Sama_3589	0.84	+0.3
4,222,587	+		Sama_3589	0.84	+3.5
4,222,587	+		Sama_3589	0.84	+0.0
4,222,587	+		Sama_3589	0.84	-0.7
4,222,587	+		Sama_3589	0.84	-0.3
4,222,587	+		Sama_3589	0.84	+1.4
4,222,588	-		Sama_3589	0.84	-1.4
4,222,588	-		Sama_3589	0.84	-2.0
4,222,588	-		Sama_3589	0.84	+0.1
4,222,588	-		Sama_3589	0.84	+0.4
4,222,588	-		Sama_3589	0.84	-3.3
4,222,588	-		Sama_3589	0.84	-0.2
4,222,588	-		Sama_3589	0.84	+1.0
4,222,603	-		Sama_3589	0.86	-0.6
4,222,657	+				-0.6
4,222,657	+				-0.4
4,222,657	+				+1.0
4,222,657	+				+0.9
4,222,658	-				-0.0
4,222,658	-				+0.3
4,222,731	+				-2.5
4,222,731	+				-0.8
4,222,732	-				+0.5
4,222,744	+				+0.9
4,222,744	+				-1.6
4,222,744	+				-0.3
4,222,745	-				+0.1
4,222,745	-				-0.3
4,222,768	+				+0.3
4,222,769	-				-0.1
4,222,769	-				-1.0
4,222,769	-				+0.5
4,222,769	-				-0.6