Strain Fitness in Shewanella amazonensis SB2B around Sama_2994

Experiment: copper (II) chloride 0.16 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	copper (II) chloride 0.16 mM
3,566,363	+				+0.3
3,566,364	-				+0.0
3,566,382	+				+0.3
3,566,382	+				-0.3
3,566,382	+				+1.1
3,566,383	-				+0.3
3,566,428	+		Sama_2993	0.14	+0.4
3,566,428	+		Sama_2993	0.14	-0.1
3,566,428	+		Sama_2993	0.14	+0.5
3,566,429	-		Sama_2993	0.14	+0.3
3,566,429	-		Sama_2993	0.14	+0.3
3,566,496	-		Sama_2993	0.21	+0.3
3,566,589	+		Sama_2993	0.31	+0.4
3,566,589	+		Sama_2993	0.31	+0.0
3,566,589	+		Sama_2993	0.31	-0.4
3,566,589	+		Sama_2993	0.31	+0.0
3,566,589	+		Sama_2993	0.31	+0.5
3,566,589	+		Sama_2993	0.31	+1.0
3,566,589	+		Sama_2993	0.31	+1.7
3,566,589	+		Sama_2993	0.31	-0.2
3,566,589	+		Sama_2993	0.31	+0.8
3,566,589	+		Sama_2993	0.31	+1.2
3,566,589	+		Sama_2993	0.31	-0.3
3,566,589	+		Sama_2993	0.31	+0.9
3,566,589	+		Sama_2993	0.31	+1.3
3,566,589	+		Sama_2993	0.31	+0.5
3,566,589	+		Sama_2993	0.31	-0.2
3,566,589	+		Sama_2993	0.31	+1.9
3,566,589	+		Sama_2993	0.31	+0.4
3,566,590	-		Sama_2993	0.31	+2.4
3,566,590	-		Sama_2993	0.31	+0.7
3,566,590	-		Sama_2993	0.31	+1.0
3,566,590	-		Sama_2993	0.31	-0.1
3,566,590	-		Sama_2993	0.31	+0.7
3,566,590	-		Sama_2993	0.31	-0.5
3,566,590	-		Sama_2993	0.31	+0.3
3,566,590	-		Sama_2993	0.31	+0.1
3,566,590	-		Sama_2993	0.31	+0.4
3,566,590	-		Sama_2993	0.31	-0.7
3,566,590	-		Sama_2993	0.31	+0.3
3,566,590	-		Sama_2993	0.31	-0.2
3,566,593	+		Sama_2993	0.31	+0.7
3,566,593	+		Sama_2993	0.31	+1.2
3,566,593	+		Sama_2993	0.31	+1.0
3,566,593	+		Sama_2993	0.31	+1.1
3,566,593	+		Sama_2993	0.31	+0.9
3,566,593	+		Sama_2993	0.31	+0.2
3,566,593	+		Sama_2993	0.31	+1.3
3,566,594	-		Sama_2993	0.31	-1.0
3,566,621	+		Sama_2993	0.34	+1.8
3,566,621	+		Sama_2993	0.34	-0.2
3,566,622	-		Sama_2993	0.34	+0.9
3,566,622	-		Sama_2993	0.34	+0.3
3,566,693	-		Sama_2993	0.42	+0.5
3,566,712	+		Sama_2993	0.44	+0.2
3,566,712	+		Sama_2993	0.44	+0.1
3,566,712	+		Sama_2993	0.44	+1.0
3,566,712	+		Sama_2993	0.44	+0.2
3,566,712	+		Sama_2993	0.44	+0.3
3,566,712	+		Sama_2993	0.44	+0.3
3,566,712	+		Sama_2993	0.44	-0.3
3,566,712	+		Sama_2993	0.44	+0.4
3,566,712	+		Sama_2993	0.44	+0.2
3,566,712	+		Sama_2993	0.44	+1.0
3,566,712	+		Sama_2993	0.44	-0.7
3,566,713	-		Sama_2993	0.44	+1.7
3,566,713	-		Sama_2993	0.44	+0.6
3,566,713	-		Sama_2993	0.44	+0.6
3,566,713	-		Sama_2993	0.44	+0.7
3,566,713	-		Sama_2993	0.44	-0.2
3,566,713	-		Sama_2993	0.44	+2.9
3,566,713	-		Sama_2993	0.44	+0.8
3,566,713	-		Sama_2993	0.44	+0.9
3,566,713	-		Sama_2993	0.44	+0.6
3,566,713	-		Sama_2993	0.44	+1.6
3,566,713	-		Sama_2993	0.44	+0.4
3,566,713	-		Sama_2993	0.44	+0.0
3,566,713	-		Sama_2993	0.44	+0.5
3,566,713	-		Sama_2993	0.44	+1.0
3,566,713	-		Sama_2993	0.44	-0.6
3,566,713	-		Sama_2993	0.44	+0.9
3,566,778	-		Sama_2993	0.51	-0.8
3,566,778	-		Sama_2993	0.51	+0.5
3,566,821	+		Sama_2993	0.55	+0.4
3,566,821	+		Sama_2993	0.55	+3.7
3,566,822	-		Sama_2993	0.55	+1.3
3,566,822	-		Sama_2993	0.55	-0.1
3,566,822	-		Sama_2993	0.55	-0.7
3,566,822	-		Sama_2993	0.55	+1.5
3,566,854	+		Sama_2993	0.59	+1.5
3,566,854	+		Sama_2993	0.59	+2.0
3,566,855	-		Sama_2993	0.59	+0.6
3,566,855	-		Sama_2993	0.59	+1.6
3,566,872	+		Sama_2993	0.61	+0.9
3,566,872	+		Sama_2993	0.61	+0.7
3,566,873	-		Sama_2993	0.61	-0.7
3,566,873	-		Sama_2993	0.61	+0.7
3,566,962	-		Sama_2993	0.70	+0.2
3,566,962	-		Sama_2993	0.70	+1.9
3,567,061	+		Sama_2993	0.80	+0.6
3,567,062	-		Sama_2993	0.81	+1.4
3,567,083	-		Sama_2993	0.83	+0.0
3,567,083	-		Sama_2993	0.83	+0.4
3,567,083	-		Sama_2993	0.83	+0.2
3,567,108	+		Sama_2993	0.85	-0.3
3,567,109	-		Sama_2993	0.86	+1.4
3,567,109	-		Sama_2993	0.86	+0.1
3,567,109	-		Sama_2993	0.86	+1.4
3,567,123	+		Sama_2993	0.87	+1.1
3,567,123	+		Sama_2993	0.87	-0.4
3,567,124	-		Sama_2993	0.87	+1.4
3,567,124	-		Sama_2993	0.87	+1.0
3,567,124	-		Sama_2993	0.87	-0.2
3,567,135	+		Sama_2993	0.88	+1.5
3,567,135	+		Sama_2993	0.88	+1.4
3,567,135	+		Sama_2993	0.88	+1.0
3,567,135	+		Sama_2993	0.88	+0.7
3,567,135	+		Sama_2993	0.88	+1.5
3,567,135	+		Sama_2993	0.88	+1.8
3,567,136	-		Sama_2993	0.88	-0.5
3,567,136	-		Sama_2993	0.88	+1.8
3,567,136	-		Sama_2993	0.88	-2.3
3,567,136	-		Sama_2993	0.88	-1.2
3,567,136	-		Sama_2993	0.88	+0.4
3,567,136	-		Sama_2993	0.88	+0.4
3,567,168	+				-0.0
3,567,168	+				+1.2
3,567,169	-				+0.7
3,567,169	-				+1.1
3,567,257	-				+1.0
3,567,299	+				+0.3
3,567,299	+				+0.4
3,567,316	+				-3.2
3,567,317	-				-0.4
3,567,317	-				+0.7
3,567,319	+				+0.7
3,567,319	+				-0.2
3,567,320	-				-0.4
3,567,331	+				-0.4
3,567,332	-				+1.7
3,567,332	-				+0.3
3,567,332	-				+1.4
3,567,370	+				+0.4
3,567,370	+				+0.2
3,567,381	-				-0.6
3,567,433	-		Sama_2994	0.12	-0.2
3,567,433	-		Sama_2994	0.12	-0.3
3,567,433	-		Sama_2994	0.12	+0.6
3,567,433	-		Sama_2994	0.12	+0.1
3,567,433	-		Sama_2994	0.12	+1.0
3,567,522	+		Sama_2994	0.22	+0.7
3,567,522	+		Sama_2994	0.22	-0.6
3,567,522	+		Sama_2994	0.22	+0.7
3,567,522	+		Sama_2994	0.22	+0.8
3,567,523	-		Sama_2994	0.23	+0.3
3,567,523	-		Sama_2994	0.23	-0.8
3,567,523	-		Sama_2994	0.23	-0.3
3,567,523	-		Sama_2994	0.23	+0.8
3,567,527	-		Sama_2994	0.23	-1.2
3,567,578	-		Sama_2994	0.29	+0.6
3,567,578	-		Sama_2994	0.29	+0.3
3,567,583	+		Sama_2994	0.30	-0.4
3,567,583	+		Sama_2994	0.30	-0.7
3,567,583	+		Sama_2994	0.30	+1.4
3,567,584	-		Sama_2994	0.30	-1.0
3,567,584	-		Sama_2994	0.30	+0.1
3,567,584	-		Sama_2994	0.30	-1.3
3,567,584	-		Sama_2994	0.30	-0.8
3,567,584	-		Sama_2994	0.30	-0.5
3,567,584	-		Sama_2994	0.30	+0.3
3,567,734	-		Sama_2994	0.47	+0.2
3,567,760	+		Sama_2994	0.50	-0.8
3,567,760	+		Sama_2994	0.50	-0.2
3,567,760	+		Sama_2994	0.50	+0.0
3,567,760	+		Sama_2994	0.50	-0.6
3,567,761	-		Sama_2994	0.50	-0.4
3,567,782	+		Sama_2994	0.53	+1.6
3,567,783	-		Sama_2994	0.53	+0.3
3,567,794	-		Sama_2994	0.54	-0.4
3,567,827	+		Sama_2994	0.58	-1.0
3,567,827	+		Sama_2994	0.58	-0.3
3,567,828	-		Sama_2994	0.58	+0.2
3,567,990	-		Sama_2994	0.77	-0.3
3,567,991	+		Sama_2994	0.77	+0.1
3,567,991	+		Sama_2994	0.77	-0.6
3,567,991	+		Sama_2994	0.77	-1.3
3,567,991	+		Sama_2994	0.77	+0.7
3,567,991	+		Sama_2994	0.77	+1.0
3,567,992	-		Sama_2994	0.77	+0.4
3,567,992	-		Sama_2994	0.77	+0.0
3,567,992	-		Sama_2994	0.77	+1.5
3,567,992	-		Sama_2994	0.77	+0.4
3,567,992	-		Sama_2994	0.77	-1.1
3,567,992	-		Sama_2994	0.77	+1.9
3,567,992	-		Sama_2994	0.77	+1.0
3,567,995	+		Sama_2994	0.78	-0.3
3,567,995	+		Sama_2994	0.78	-3.5
3,567,995	+		Sama_2994	0.78	-0.8
3,567,995	+		Sama_2994	0.78	+0.7
3,567,996	-		Sama_2994	0.78	+1.4
3,567,996	-		Sama_2994	0.78	+0.6
3,567,996	-		Sama_2994	0.78	-0.3
3,567,996	-		Sama_2994	0.78	+1.9
3,567,996	-		Sama_2994	0.78	+0.0
3,567,996	-		Sama_2994	0.78	+0.2
3,567,996	-		Sama_2994	0.78	-0.8
3,568,052	+		Sama_2994	0.84	+0.9
3,568,099	-				+0.3
3,568,165	-				+0.5
3,568,165	-				-0.9
3,568,215	+				-0.3
3,568,216	-				-0.8
3,568,261	+				-0.2
3,568,278	+				-0.3
3,568,357	-		Sama_2995	0.39	+0.0
3,568,409	+		Sama_2995	0.65	-1.7
3,568,409	+		Sama_2995	0.65	-2.8
3,568,409	+		Sama_2995	0.65	-0.7
3,568,409	+		Sama_2995	0.65	-0.1
3,568,409	+		Sama_2995	0.65	-1.0
3,568,409	+		Sama_2995	0.65	-1.0
3,568,409	+		Sama_2995	0.65	-1.2
3,568,409	+		Sama_2995	0.65	-1.3
3,568,409	+		Sama_2995	0.65	-1.4
3,568,410	-		Sama_2995	0.66	-0.6
3,568,410	-		Sama_2995	0.66	-1.6
3,568,410	-		Sama_2995	0.66	+0.4
3,568,410	-		Sama_2995	0.66	-0.3
3,568,410	-		Sama_2995	0.66	+0.2
3,568,410	-		Sama_2995	0.66	-0.4
3,568,410	-		Sama_2995	0.66	-0.6
3,568,410	-		Sama_2995	0.66	-1.1
3,568,410	-		Sama_2995	0.66	-0.7
3,568,471	+				-0.4
3,568,471	+				-2.0
3,568,477	+				+0.2
3,568,478	-				+0.2
3,568,478	-				-0.9
3,568,478	-				+0.3
3,568,478	-				+0.6
3,568,507	+				-0.5
3,568,507	+				-2.9
3,568,507	+				-2.0
3,568,508	-				+0.2
3,568,508	-				-0.5
3,568,522	+				-0.9
3,568,523	-				-1.2
3,568,523	-				-0.2
3,568,536	+				+0.2
3,568,536	+				-0.8
3,568,536	+				-0.6
3,568,536	+				+0.4
3,568,537	-				-0.0
3,568,537	-				+0.2
3,568,579	+				+0.6
3,568,580	-				+0.0
3,568,580	-				-1.3
3,568,580	-				+0.3
3,568,580	-				-0.3
3,568,591	+				+0.0
3,568,591	+				-1.6
3,568,591	+				+0.6
3,568,591	+				+0.8
3,568,592	-				+0.3
3,568,592	-				+0.4
3,568,592	-				-0.2
3,568,592	-				+0.7
3,568,592	-				+1.4
3,568,592	-				-0.6
3,568,592	-				-0.0
3,568,592	-				+0.7
3,568,592	-				-0.9
3,568,592	-				-0.1
3,568,592	-				-0.9
3,568,593	+				-0.9
3,568,593	+				-0.3
3,568,593	+				+1.2
3,568,593	+				+0.1
3,568,593	+				+0.2
3,568,593	+				+0.1
3,568,593	+				-0.4
3,568,593	+				-0.2
3,568,593	+				-1.7
3,568,593	+				+0.2
3,568,593	+				+0.4
3,568,593	+				-1.3
3,568,593	+				-0.4
3,568,594	-				+0.0
3,568,594	-				+0.7
3,568,594	-				-0.4
3,568,594	-				-0.3
3,568,594	-				+0.3
3,568,594	-				-1.4
3,568,594	-				+0.2
3,568,594	-				+0.2
3,568,594	-				+1.1
3,568,599	+				-1.6
3,568,599	+				-2.7
3,568,599	+				-2.4
3,568,599	+				+1.4
3,568,599	+				+0.4
3,568,599	+				+0.6
3,568,599	+				-1.6
3,568,599	+				+0.9
3,568,599	+				-0.6
3,568,599	+				+0.9
3,568,600	-				+1.2
3,568,600	-				-0.2
3,568,600	-				+0.5
3,568,600	-				-1.2
3,568,600	-				-0.1
3,568,600	-				-0.3
3,568,656	+				-0.6
3,568,656	+				+1.0
3,568,657	-				+0.6
3,568,657	-				-0.4
3,568,657	-				+0.0
3,568,681	+				-0.5
3,568,681	+				-0.4
3,568,682	-				+0.5
3,568,685	+				+1.8
3,568,686	-				-0.2
3,568,859	+		Sama_2996	0.13	-1.0
3,568,859	+		Sama_2996	0.13	+1.8
3,568,859	+		Sama_2996	0.13	+2.0
3,568,859	+		Sama_2996	0.13	-0.0
3,568,859	+		Sama_2996	0.13	+0.3
3,568,859	+		Sama_2996	0.13	+0.3
3,568,859	+		Sama_2996	0.13	+0.4
3,568,859	+		Sama_2996	0.13	-0.3
3,568,859	+		Sama_2996	0.13	-1.8
3,568,860	-		Sama_2996	0.13	+0.0
3,568,860	-		Sama_2996	0.13	+0.0
3,568,905	+		Sama_2996	0.15	+0.6
3,568,905	+		Sama_2996	0.15	+0.8
3,568,906	-		Sama_2996	0.15	-0.3
3,568,958	-		Sama_2996	0.18	+0.1
3,568,979	+		Sama_2996	0.19	-0.8
3,568,979	+		Sama_2996	0.19	-0.1
3,568,986	+		Sama_2996	0.20	-0.2
3,568,986	+		Sama_2996	0.20	+0.6
3,568,986	+		Sama_2996	0.20	+0.2
3,568,986	+		Sama_2996	0.20	+0.2
3,568,986	+		Sama_2996	0.20	-0.3
3,568,986	+		Sama_2996	0.20	+0.1
3,568,986	+		Sama_2996	0.20	-2.0
3,568,986	+		Sama_2996	0.20	-0.3
3,568,986	+		Sama_2996	0.20	-0.2
3,568,986	+		Sama_2996	0.20	+0.5
3,568,986	+		Sama_2996	0.20	-1.4
3,568,986	+		Sama_2996	0.20	-0.5
3,568,986	+		Sama_2996	0.20	-0.4
3,568,986	+		Sama_2996	0.20	+0.7
3,568,987	-		Sama_2996	0.20	+1.7
3,568,987	-		Sama_2996	0.20	+0.6
3,568,987	-		Sama_2996	0.20	+0.5
3,568,987	-		Sama_2996	0.20	-1.5
3,568,987	-		Sama_2996	0.20	+0.0
3,568,987	-		Sama_2996	0.20	-0.6
3,568,987	-		Sama_2996	0.20	-1.0
3,568,987	-		Sama_2996	0.20	-0.9
3,568,987	-		Sama_2996	0.20	+1.0
3,569,077	+		Sama_2996	0.24	-0.2
3,569,078	-		Sama_2996	0.24	-0.6