Strain Fitness in Shewanella oneidensis MR-1 around SO2758

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,879,279	+		SO2757	0.33	+1.0
2,879,279	+		SO2757	0.33	-0.4
2,879,291	+		SO2757	0.34	-0.0
2,879,291	+		SO2757	0.34	+0.6
2,879,498	-		SO2757	0.50	-0.4
2,879,595	+		SO2757	0.57	+0.1
2,879,624	-		SO2757	0.60	-0.0
2,879,677	+		SO2757	0.64	+2.6
2,879,781	-		SO2757	0.72	-0.9
2,879,940	-		SO2757	0.84	+1.0
2,879,947	-		SO2757	0.84	-0.2
2,880,124	-				+0.5
2,880,303	+				+0.2
2,880,303	+				-0.1
2,880,311	-				+0.7
2,880,351	+				-0.6
2,880,359	-				+1.1
2,880,388	+		SO2758	0.11	+0.5
2,880,401	-		SO2758	0.12	+0.7
2,880,556	-		SO2758	0.23	+0.1
2,880,561	-		SO2758	0.23	-0.2
2,880,600	+		SO2758	0.26	-0.4
2,880,700	-		SO2758	0.33	+0.6
2,880,769	+		SO2758	0.38	+1.4
2,881,036	+		SO2758	0.57	+1.3
2,881,335	+		SO2758	0.78	+1.2
2,881,402	+		SO2758	0.83	+0.1
2,881,598	+				-0.8
2,881,606	-				-0.2
2,881,859	+				-0.4
2,881,867	-				-1.0
2,881,867	-				+0.2
2,881,873	+				+0.3
2,881,873	+				-0.5
2,881,873	+				-0.1
2,881,873	+				-0.8
2,881,881	-				+0.2
2,881,881	-				-0.2
2,881,881	-				-1.5
2,881,881	-				+1.2
2,881,914	+	upp	SO2759	0.14	+0.7
2,881,914	+	upp	SO2759	0.14	-0.5
2,881,914	+	upp	SO2759	0.14	-0.2
2,881,969	-	upp	SO2759	0.23	+0.4
2,882,125	+	upp	SO2759	0.48	+1.0
2,882,133	-	upp	SO2759	0.49	+0.4
2,882,133	-	upp	SO2759	0.49	-0.1
2,882,133	-	upp	SO2759	0.49	+0.7
2,882,133	-	upp	SO2759	0.49	+0.5
2,882,207	+	upp	SO2759	0.61	+0.7
2,882,215	-	upp	SO2759	0.62	+0.6
2,882,250	+	upp	SO2759	0.68	+0.5
2,882,392	-				-0.6
2,882,439	-				-0.2