Strain Fitness in Shewanella oneidensis MR-1 around SO2115

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,217,088	-		SO2114	0.66	+0.3
2,217,150	+		SO2114	0.70	+0.3
2,217,150	+		SO2114	0.70	+0.4
2,217,286	-		SO2114	0.77	-0.4
2,217,286	-		SO2114	0.77	+0.8
2,217,469	-		SO2114	0.87	+0.7
2,217,608	+				-0.3
2,217,731	-				+0.3
2,217,970	+				+0.2
2,218,031	-		SO2115	0.15	+0.2
2,218,032	-		SO2115	0.15	+0.5
2,218,231	-		SO2115	0.35	-0.1
2,218,313	-		SO2115	0.44	+0.3
2,218,319	-		SO2115	0.44	+1.4
2,218,395	+		SO2115	0.52	+1.1
2,218,395	+		SO2115	0.52	+1.0
2,218,504	+		SO2115	0.63	-0.0
2,218,513	-		SO2115	0.64	+1.1
2,218,524	+		SO2115	0.65	+1.0
2,218,571	+		SO2115	0.70	+0.2
2,218,795	-				-0.1
2,218,844	-				+0.5
2,219,142	+				+0.2
2,219,143	-				+0.2
2,219,143	-				+0.6
2,219,411	+		SO2116	0.18	+0.1
2,219,423	+		SO2116	0.18	+0.9
2,219,533	-		SO2116	0.22	-0.2
2,219,544	-		SO2116	0.22	+0.6
2,219,583	-		SO2116	0.24	+0.3
2,219,597	+		SO2116	0.24	+0.2
2,219,762	-		SO2116	0.30	+0.8
2,219,801	-		SO2116	0.32	-0.1
2,219,801	-		SO2116	0.32	+0.6