Experiment: Furfuryl Alcohol 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0067 and Psest_0068 are separated by 101 nucleotides Psest_0068 and Psest_0069 are separated by 79 nucleotides
Psest_0067: Psest_0067 - Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain, at 67,502 to 68,500
_0067
Psest_0068: Psest_0068 - Amidases related to nicotinamidase, at 68,602 to 69,156
_0068
Psest_0069: Psest_0069 - UDP-glucose-4-epimerase, at 69,236 to 70,300
_0069
Position (kb)
68
69
70 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 67.699 kb on - strand, within Psest_0067 at 67.835 kb on + strand, within Psest_0067 at 67.917 kb on + strand, within Psest_0067 at 68.519 kb on - strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.559 kb on + strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.560 kb on - strand at 68.645 kb on - strand at 68.645 kb on - strand at 69.136 kb on + strand at 69.136 kb on + strand at 69.210 kb on + strand at 69.210 kb on + strand at 69.210 kb on + strand at 69.606 kb on + strand, within Psest_0069 at 69.607 kb on - strand, within Psest_0069 at 69.607 kb on - strand, within Psest_0069 at 69.607 kb on - strand, within Psest_0069 at 69.607 kb on - strand, within Psest_0069 at 69.607 kb on - strand, within Psest_0069 at 69.607 kb on - strand, within Psest_0069 at 69.651 kb on + strand, within Psest_0069 at 69.651 kb on + strand, within Psest_0069 at 69.652 kb on - strand, within Psest_0069 at 69.670 kb on + strand, within Psest_0069 at 69.670 kb on + strand, within Psest_0069 at 69.670 kb on + strand, within Psest_0069 at 69.671 kb on - strand, within Psest_0069 at 69.696 kb on + strand, within Psest_0069 at 69.696 kb on + strand, within Psest_0069 at 69.697 kb on - strand, within Psest_0069 at 69.697 kb on - strand, within Psest_0069 at 69.775 kb on - strand, within Psest_0069 at 69.775 kb on - strand, within Psest_0069
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.05 vol% remove 67,699 - Psest_0067 0.20 +0.6 67,835 + Psest_0067 0.33 +0.1 67,917 + Psest_0067 0.42 -0.2 68,519 - +0.8 68,559 + -0.1 68,559 + -1.1 68,559 + -0.9 68,559 + +1.2 68,559 + -1.6 68,559 + -2.9 68,559 + +1.0 68,559 + -2.6 68,559 + -0.7 68,559 + -0.8 68,559 + -0.2 68,559 + +0.2 68,559 + +0.5 68,559 + +1.2 68,559 + +3.5 68,560 - +1.9 68,560 - -0.4 68,560 - +2.2 68,560 - +1.7 68,560 - +1.1 68,560 - +1.0 68,560 - -0.0 68,560 - +0.7 68,560 - +0.6 68,560 - +0.7 68,560 - +1.5 68,560 - +1.9 68,560 - -1.4 68,560 - +0.5 68,560 - +2.1 68,560 - +0.9 68,645 - +1.0 68,645 - +0.9 69,136 + -1.6 69,136 + -0.9 69,210 + -0.8 69,210 + +0.2 69,210 + +0.3 69,606 + Psest_0069 0.35 -1.4 69,607 - Psest_0069 0.35 -1.1 69,607 - Psest_0069 0.35 +1.5 69,607 - Psest_0069 0.35 -0.1 69,607 - Psest_0069 0.35 -2.4 69,607 - Psest_0069 0.35 +0.6 69,607 - Psest_0069 0.35 -1.1 69,651 + Psest_0069 0.39 -2.5 69,651 + Psest_0069 0.39 -0.3 69,652 - Psest_0069 0.39 -0.4 69,670 + Psest_0069 0.41 -0.8 69,670 + Psest_0069 0.41 -0.3 69,670 + Psest_0069 0.41 -2.3 69,671 - Psest_0069 0.41 +1.3 69,696 + Psest_0069 0.43 +0.5 69,696 + Psest_0069 0.43 +0.0 69,697 - Psest_0069 0.43 +0.3 69,697 - Psest_0069 0.43 +0.7 69,775 - Psest_0069 0.51 -0.9 69,775 - Psest_0069 0.51 +0.9
Or see this region's nucleotide sequence