Experiment: Furfuryl Alcohol 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3858 and Psest_3859 are separated by 103 nucleotides Psest_3859 and Psest_3860 are separated by 10 nucleotides Psest_3860 and Psest_3861 are separated by 159 nucleotides Psest_3861 and Psest_3862 are separated by 6 nucleotides
Psest_3858: Psest_3858 - thymidylate synthase, at 4,029,799 to 4,030,593
_3858
Psest_3859: Psest_3859 - prolipoprotein diacylglyceryl transferase, at 4,030,697 to 4,031,497
_3859
Psest_3860: Psest_3860 - Predicted permeases, at 4,031,508 to 4,032,290
_3860
Psest_3861: Psest_3861 - Uncharacterized conserved protein, at 4,032,450 to 4,033,206
_3861
Psest_3862: Psest_3862 - phosphoenolpyruvate-protein phosphotransferase, at 4,033,213 to 4,035,486
_3862
Position (kb)
4031
4032
4033 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4030.643 kb on - strand at 4030.643 kb on - strand at 4030.643 kb on - strand at 4030.646 kb on - strand at 4030.646 kb on - strand at 4030.646 kb on - strand at 4030.646 kb on - strand at 4031.653 kb on + strand, within Psest_3860 at 4031.653 kb on + strand, within Psest_3860 at 4031.653 kb on + strand, within Psest_3860 at 4031.653 kb on + strand, within Psest_3860 at 4031.801 kb on - strand, within Psest_3860 at 4031.934 kb on + strand, within Psest_3860 at 4032.274 kb on + strand at 4032.274 kb on + strand at 4032.274 kb on + strand at 4032.275 kb on - strand at 4032.275 kb on - strand at 4032.275 kb on - strand at 4032.275 kb on - strand at 4032.310 kb on + strand at 4032.415 kb on + strand at 4032.415 kb on + strand at 4032.416 kb on - strand at 4032.439 kb on + strand at 4032.440 kb on - strand at 4032.440 kb on - strand at 4032.712 kb on + strand, within Psest_3861 at 4032.712 kb on + strand, within Psest_3861 at 4032.712 kb on + strand, within Psest_3861 at 4032.713 kb on - strand, within Psest_3861 at 4032.713 kb on - strand, within Psest_3861 at 4032.743 kb on - strand, within Psest_3861 at 4032.775 kb on + strand, within Psest_3861 at 4032.776 kb on - strand, within Psest_3861 at 4032.776 kb on - strand, within Psest_3861 at 4032.776 kb on - strand, within Psest_3861 at 4032.776 kb on - strand, within Psest_3861 at 4033.069 kb on - strand, within Psest_3861 at 4033.278 kb on + strand at 4033.278 kb on + strand at 4033.279 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.05 vol% remove 4,030,643 - +1.1 4,030,643 - -2.0 4,030,643 - +1.9 4,030,646 - +0.5 4,030,646 - +0.4 4,030,646 - +1.4 4,030,646 - -1.9 4,031,653 + Psest_3860 0.19 +2.4 4,031,653 + Psest_3860 0.19 +3.4 4,031,653 + Psest_3860 0.19 +2.9 4,031,653 + Psest_3860 0.19 +2.9 4,031,801 - Psest_3860 0.37 +0.6 4,031,934 + Psest_3860 0.54 -0.1 4,032,274 + +0.8 4,032,274 + +1.8 4,032,274 + +3.4 4,032,275 - +0.6 4,032,275 - -2.1 4,032,275 - +0.5 4,032,275 - -1.5 4,032,310 + +0.6 4,032,415 + +2.0 4,032,415 + +2.2 4,032,416 - -0.2 4,032,439 + +1.7 4,032,440 - +0.0 4,032,440 - -0.1 4,032,712 + Psest_3861 0.35 +2.8 4,032,712 + Psest_3861 0.35 +1.2 4,032,712 + Psest_3861 0.35 +1.2 4,032,713 - Psest_3861 0.35 +2.9 4,032,713 - Psest_3861 0.35 -0.5 4,032,743 - Psest_3861 0.39 +0.2 4,032,775 + Psest_3861 0.43 +0.4 4,032,776 - Psest_3861 0.43 +0.0 4,032,776 - Psest_3861 0.43 -0.2 4,032,776 - Psest_3861 0.43 +0.6 4,032,776 - Psest_3861 0.43 -0.4 4,033,069 - Psest_3861 0.82 -1.0 4,033,278 + +0.8 4,033,278 + -1.5 4,033,279 - +1.8
Or see this region's nucleotide sequence