Experiment: Furfuryl Alcohol 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3856 and Psest_3857 are separated by 27 nucleotides Psest_3857 and Psest_3858 are separated by 86 nucleotides Psest_3858 and Psest_3859 are separated by 103 nucleotides Psest_3859 and Psest_3860 are separated by 10 nucleotides
Psest_3856: Psest_3856 - ABC-type branched-chain amino acid transport system, permease component, at 4,027,925 to 4,028,911
_3856
Psest_3857: Psest_3857 - ATPases involved in chromosome partitioning, at 4,028,939 to 4,029,712
_3857
Psest_3858: Psest_3858 - thymidylate synthase, at 4,029,799 to 4,030,593
_3858
Psest_3859: Psest_3859 - prolipoprotein diacylglyceryl transferase, at 4,030,697 to 4,031,497
_3859
Psest_3860: Psest_3860 - Predicted permeases, at 4,031,508 to 4,032,290
_3860
Position (kb)
4029
4030
4031 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 4028.864 kb on + strand at 4028.864 kb on + strand at 4028.864 kb on + strand at 4028.865 kb on - strand at 4028.865 kb on - strand at 4028.865 kb on - strand at 4028.865 kb on - strand at 4028.865 kb on - strand at 4028.865 kb on - strand at 4028.865 kb on - strand at 4029.010 kb on - strand at 4029.023 kb on - strand, within Psest_3857 at 4029.023 kb on - strand, within Psest_3857 at 4029.222 kb on + strand, within Psest_3857 at 4029.222 kb on + strand, within Psest_3857 at 4029.300 kb on + strand, within Psest_3857 at 4029.301 kb on - strand, within Psest_3857 at 4029.342 kb on + strand, within Psest_3857 at 4029.342 kb on + strand, within Psest_3857 at 4029.343 kb on - strand, within Psest_3857 at 4029.343 kb on - strand, within Psest_3857 at 4029.577 kb on - strand, within Psest_3857 at 4029.748 kb on - strand at 4029.748 kb on - strand at 4030.643 kb on - strand at 4030.643 kb on - strand at 4030.643 kb on - strand at 4030.646 kb on - strand at 4030.646 kb on - strand at 4030.646 kb on - strand at 4030.646 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.05 vol% remove 4,028,864 + -0.5 4,028,864 + -0.1 4,028,864 + -1.7 4,028,865 - -0.6 4,028,865 - +0.9 4,028,865 - +0.9 4,028,865 - -2.6 4,028,865 - +0.9 4,028,865 - +2.1 4,028,865 - +1.6 4,029,010 - +0.0 4,029,023 - Psest_3857 0.11 -1.8 4,029,023 - Psest_3857 0.11 -0.4 4,029,222 + Psest_3857 0.37 -2.3 4,029,222 + Psest_3857 0.37 -0.1 4,029,300 + Psest_3857 0.47 +3.9 4,029,301 - Psest_3857 0.47 +0.2 4,029,342 + Psest_3857 0.52 +1.8 4,029,342 + Psest_3857 0.52 -0.4 4,029,343 - Psest_3857 0.52 +1.1 4,029,343 - Psest_3857 0.52 -1.4 4,029,577 - Psest_3857 0.82 +0.5 4,029,748 - +1.2 4,029,748 - +0.2 4,030,643 - +1.1 4,030,643 - -2.0 4,030,643 - +1.9 4,030,646 - +0.5 4,030,646 - +0.4 4,030,646 - +1.4 4,030,646 - -1.9
Or see this region's nucleotide sequence