Experiment: Furfuryl Alcohol 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3781 and Psest_3782 are separated by 4 nucleotides Psest_3782 and Psest_3783 are separated by 160 nucleotides Psest_3783 and Psest_3784 overlap by 1 nucleotides
Psest_3781: Psest_3781 - methylmalonic acid semialdehyde dehydrogenase, at 3,950,249 to 3,951,751
_3781
Psest_3782: Psest_3782 - Alcohol dehydrogenase, class IV, at 3,951,756 to 3,952,922
_3782
Psest_3783: Psest_3783 - Methenyl tetrahydrofolate cyclohydrolase, at 3,953,083 to 3,953,664
_3783
Psest_3784: Psest_3784 - glyceraldehyde-3-phosphate dehydrogenase, type I, at 3,953,664 to 3,954,674
_3784
Position (kb)
3951
3952
3953 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 3950.931 kb on + strand, within Psest_3781 at 3950.931 kb on + strand, within Psest_3781 at 3951.051 kb on + strand, within Psest_3781 at 3951.051 kb on + strand, within Psest_3781 at 3951.051 kb on + strand, within Psest_3781 at 3951.051 kb on + strand, within Psest_3781 at 3951.051 kb on + strand, within Psest_3781 at 3951.051 kb on + strand, within Psest_3781 at 3951.051 kb on + strand, within Psest_3781 at 3951.051 kb on + strand, within Psest_3781 at 3951.051 kb on + strand, within Psest_3781 at 3951.051 kb on + strand, within Psest_3781 at 3951.051 kb on + strand, within Psest_3781 at 3951.051 kb on + strand, within Psest_3781 at 3951.051 kb on + strand, within Psest_3781 at 3951.051 kb on + strand, within Psest_3781 at 3951.051 kb on + strand, within Psest_3781 at 3951.052 kb on - strand, within Psest_3781 at 3951.052 kb on - strand, within Psest_3781 at 3951.052 kb on - strand, within Psest_3781 at 3951.052 kb on - strand, within Psest_3781 at 3951.052 kb on - strand, within Psest_3781 at 3951.052 kb on - strand, within Psest_3781 at 3951.052 kb on - strand, within Psest_3781 at 3951.052 kb on - strand, within Psest_3781 at 3951.052 kb on - strand, within Psest_3781 at 3951.052 kb on - strand, within Psest_3781 at 3951.052 kb on - strand, within Psest_3781 at 3951.057 kb on + strand, within Psest_3781 at 3951.057 kb on + strand, within Psest_3781 at 3951.057 kb on + strand, within Psest_3781 at 3951.057 kb on + strand, within Psest_3781 at 3951.057 kb on + strand, within Psest_3781 at 3951.057 kb on + strand, within Psest_3781 at 3951.057 kb on + strand, within Psest_3781 at 3951.058 kb on - strand, within Psest_3781 at 3951.058 kb on - strand, within Psest_3781 at 3951.058 kb on - strand, within Psest_3781 at 3951.058 kb on - strand, within Psest_3781 at 3951.058 kb on - strand, within Psest_3781 at 3951.058 kb on - strand, within Psest_3781 at 3951.058 kb on - strand, within Psest_3781 at 3951.058 kb on - strand, within Psest_3781 at 3951.058 kb on - strand, within Psest_3781 at 3951.247 kb on + strand, within Psest_3781 at 3951.248 kb on - strand, within Psest_3781 at 3951.248 kb on - strand, within Psest_3781 at 3951.651 kb on + strand at 3951.651 kb on + strand at 3951.651 kb on + strand at 3951.651 kb on + strand at 3951.651 kb on + strand at 3951.651 kb on + strand at 3951.651 kb on + strand at 3951.652 kb on - strand at 3951.652 kb on - strand at 3951.652 kb on - strand at 3951.652 kb on - strand at 3951.681 kb on + strand at 3951.681 kb on + strand at 3951.682 kb on - strand at 3951.682 kb on - strand at 3951.682 kb on - strand at 3952.028 kb on - strand, within Psest_3782 at 3952.318 kb on + strand, within Psest_3782 at 3952.318 kb on + strand, within Psest_3782 at 3952.318 kb on + strand, within Psest_3782 at 3952.318 kb on + strand, within Psest_3782 at 3952.318 kb on + strand, within Psest_3782 at 3952.318 kb on + strand, within Psest_3782 at 3952.318 kb on + strand, within Psest_3782 at 3952.319 kb on - strand, within Psest_3782 at 3952.319 kb on - strand, within Psest_3782 at 3952.319 kb on - strand, within Psest_3782 at 3952.319 kb on - strand, within Psest_3782 at 3952.786 kb on + strand, within Psest_3782 at 3952.786 kb on + strand, within Psest_3782 at 3952.787 kb on - strand, within Psest_3782 at 3953.206 kb on + strand, within Psest_3783 at 3953.738 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.05 vol% remove 3,950,931 + Psest_3781 0.45 +5.1 3,950,931 + Psest_3781 0.45 +1.7 3,951,051 + Psest_3781 0.53 -0.6 3,951,051 + Psest_3781 0.53 +0.3 3,951,051 + Psest_3781 0.53 +1.7 3,951,051 + Psest_3781 0.53 +1.6 3,951,051 + Psest_3781 0.53 +1.5 3,951,051 + Psest_3781 0.53 +2.7 3,951,051 + Psest_3781 0.53 +1.0 3,951,051 + Psest_3781 0.53 -1.1 3,951,051 + Psest_3781 0.53 +2.9 3,951,051 + Psest_3781 0.53 +2.7 3,951,051 + Psest_3781 0.53 -0.9 3,951,051 + Psest_3781 0.53 -1.3 3,951,051 + Psest_3781 0.53 +0.5 3,951,051 + Psest_3781 0.53 +1.8 3,951,051 + Psest_3781 0.53 +0.7 3,951,052 - Psest_3781 0.53 +0.5 3,951,052 - Psest_3781 0.53 +0.7 3,951,052 - Psest_3781 0.53 +0.5 3,951,052 - Psest_3781 0.53 +0.1 3,951,052 - Psest_3781 0.53 +0.1 3,951,052 - Psest_3781 0.53 +1.7 3,951,052 - Psest_3781 0.53 -0.6 3,951,052 - Psest_3781 0.53 -0.9 3,951,052 - Psest_3781 0.53 +0.7 3,951,052 - Psest_3781 0.53 -0.6 3,951,052 - Psest_3781 0.53 +0.1 3,951,057 + Psest_3781 0.54 -0.7 3,951,057 + Psest_3781 0.54 +1.1 3,951,057 + Psest_3781 0.54 +2.3 3,951,057 + Psest_3781 0.54 -0.7 3,951,057 + Psest_3781 0.54 +0.7 3,951,057 + Psest_3781 0.54 -0.7 3,951,057 + Psest_3781 0.54 +0.4 3,951,058 - Psest_3781 0.54 +1.7 3,951,058 - Psest_3781 0.54 -1.1 3,951,058 - Psest_3781 0.54 +0.7 3,951,058 - Psest_3781 0.54 +1.7 3,951,058 - Psest_3781 0.54 -0.3 3,951,058 - Psest_3781 0.54 -0.3 3,951,058 - Psest_3781 0.54 -0.9 3,951,058 - Psest_3781 0.54 -0.3 3,951,058 - Psest_3781 0.54 -0.9 3,951,247 + Psest_3781 0.66 +1.7 3,951,248 - Psest_3781 0.66 +0.1 3,951,248 - Psest_3781 0.66 +0.1 3,951,651 + -1.1 3,951,651 + +1.0 3,951,651 + +0.1 3,951,651 + +0.3 3,951,651 + +2.7 3,951,651 + +0.1 3,951,651 + +4.3 3,951,652 - -1.4 3,951,652 - +1.7 3,951,652 - -3.0 3,951,652 - +0.7 3,951,681 + +0.6 3,951,681 + -1.6 3,951,682 - +1.1 3,951,682 - +0.5 3,951,682 - -0.4 3,952,028 - Psest_3782 0.23 +1.7 3,952,318 + Psest_3782 0.48 -0.6 3,952,318 + Psest_3782 0.48 -0.3 3,952,318 + Psest_3782 0.48 +0.7 3,952,318 + Psest_3782 0.48 +1.1 3,952,318 + Psest_3782 0.48 +0.3 3,952,318 + Psest_3782 0.48 +0.1 3,952,318 + Psest_3782 0.48 +1.7 3,952,319 - Psest_3782 0.48 +2.7 3,952,319 - Psest_3782 0.48 +1.7 3,952,319 - Psest_3782 0.48 -0.3 3,952,319 - Psest_3782 0.48 +1.7 3,952,786 + Psest_3782 0.88 +3.7 3,952,786 + Psest_3782 0.88 +1.1 3,952,787 - Psest_3782 0.88 +2.1 3,953,206 + Psest_3783 0.21 +1.7 3,953,738 - +1.2
Or see this region's nucleotide sequence