Experiment: Furfuryl Alcohol 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3734 and Psest_3735 are separated by 147 nucleotides Psest_3735 and Psest_3736 are separated by 4 nucleotides Psest_3736 and Psest_3737 are separated by 14 nucleotides
Psest_3734: Psest_3734 - Uncharacterized protein involved in an early stage of isoprenoid biosynthesis, at 3,907,705 to 3,908,370
_3734
Psest_3735: Psest_3735 - uncharacterized domain 1, at 3,908,518 to 3,908,985
_3735
Psest_3736: Psest_3736 - Uncharacterized protein conserved in bacteria, at 3,908,990 to 3,909,445
_3736
Psest_3737: Psest_3737 - Putative threonine efflux protein, at 3,909,460 to 3,910,092
_3737
Position (kb)
3908
3909 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 3907.644 kb on - strand at 3907.644 kb on - strand at 3907.644 kb on - strand at 3907.644 kb on - strand at 3907.704 kb on + strand at 3907.704 kb on + strand at 3907.705 kb on - strand at 3907.747 kb on + strand at 3907.747 kb on + strand at 3907.748 kb on - strand at 3907.748 kb on - strand at 3907.765 kb on + strand at 3907.765 kb on + strand at 3907.765 kb on + strand at 3907.765 kb on + strand at 3907.765 kb on + strand at 3907.765 kb on + strand at 3907.765 kb on + strand at 3907.765 kb on + strand at 3907.766 kb on - strand at 3907.766 kb on - strand at 3907.766 kb on - strand at 3907.766 kb on - strand at 3907.766 kb on - strand at 3907.766 kb on - strand at 3907.766 kb on - strand at 3907.766 kb on - strand at 3907.766 kb on - strand at 3908.284 kb on + strand, within Psest_3734 at 3908.284 kb on + strand, within Psest_3734 at 3908.284 kb on + strand, within Psest_3734 at 3908.284 kb on + strand, within Psest_3734 at 3908.284 kb on + strand, within Psest_3734 at 3908.284 kb on + strand, within Psest_3734 at 3908.284 kb on + strand, within Psest_3734 at 3908.284 kb on + strand, within Psest_3734 at 3908.284 kb on + strand, within Psest_3734 at 3908.284 kb on + strand, within Psest_3734 at 3908.284 kb on + strand, within Psest_3734 at 3908.284 kb on + strand, within Psest_3734 at 3908.284 kb on + strand, within Psest_3734 at 3908.284 kb on + strand, within Psest_3734 at 3908.284 kb on + strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.285 kb on - strand, within Psest_3734 at 3908.326 kb on + strand at 3908.326 kb on + strand at 3908.326 kb on + strand at 3908.326 kb on + strand at 3908.326 kb on + strand at 3908.326 kb on + strand at 3908.326 kb on + strand at 3908.327 kb on - strand at 3908.839 kb on + strand, within Psest_3735 at 3908.840 kb on - strand, within Psest_3735 at 3908.958 kb on - strand at 3908.971 kb on + strand at 3908.971 kb on + strand at 3908.971 kb on + strand at 3908.972 kb on - strand at 3908.972 kb on - strand at 3908.972 kb on - strand at 3908.972 kb on - strand at 3908.972 kb on - strand at 3908.972 kb on - strand at 3908.972 kb on - strand at 3908.972 kb on - strand at 3909.305 kb on + strand, within Psest_3736 at 3909.306 kb on - strand, within Psest_3736 at 3909.306 kb on - strand, within Psest_3736 at 3909.464 kb on - strand at 3909.464 kb on - strand at 3909.593 kb on + strand, within Psest_3737 at 3909.593 kb on + strand, within Psest_3737 at 3909.593 kb on + strand, within Psest_3737 at 3909.594 kb on - strand, within Psest_3737 at 3909.594 kb on - strand, within Psest_3737 at 3909.594 kb on - strand, within Psest_3737 at 3909.594 kb on - strand, within Psest_3737 at 3909.594 kb on - strand, within Psest_3737 at 3909.594 kb on - strand, within Psest_3737 at 3909.647 kb on + strand, within Psest_3737 at 3909.648 kb on - strand, within Psest_3737 at 3909.648 kb on - strand, within Psest_3737 at 3909.974 kb on + strand, within Psest_3737
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.05 vol% remove 3,907,644 - +1.2 3,907,644 - -0.5 3,907,644 - +0.1 3,907,644 - -0.2 3,907,704 + -0.6 3,907,704 + +1.9 3,907,705 - -0.8 3,907,747 + -0.3 3,907,747 + -1.0 3,907,748 - +2.5 3,907,748 - +1.9 3,907,765 + +0.4 3,907,765 + -1.3 3,907,765 + -0.3 3,907,765 + +0.1 3,907,765 + -0.6 3,907,765 + +1.1 3,907,765 + +0.4 3,907,765 + -0.6 3,907,766 - -1.1 3,907,766 - +0.1 3,907,766 - -0.5 3,907,766 - -1.3 3,907,766 - -2.0 3,907,766 - +2.9 3,907,766 - -0.9 3,907,766 - +3.8 3,907,766 - -0.9 3,908,284 + Psest_3734 0.87 -0.4 3,908,284 + Psest_3734 0.87 -1.7 3,908,284 + Psest_3734 0.87 -0.3 3,908,284 + Psest_3734 0.87 -1.9 3,908,284 + Psest_3734 0.87 +0.1 3,908,284 + Psest_3734 0.87 -2.3 3,908,284 + Psest_3734 0.87 -2.0 3,908,284 + Psest_3734 0.87 -1.1 3,908,284 + Psest_3734 0.87 -0.2 3,908,284 + Psest_3734 0.87 +0.4 3,908,284 + Psest_3734 0.87 -1.1 3,908,284 + Psest_3734 0.87 -0.6 3,908,284 + Psest_3734 0.87 +0.4 3,908,284 + Psest_3734 0.87 -2.3 3,908,284 + Psest_3734 0.87 -3.3 3,908,285 - Psest_3734 0.87 -2.5 3,908,285 - Psest_3734 0.87 +0.5 3,908,285 - Psest_3734 0.87 +2.5 3,908,285 - Psest_3734 0.87 -0.1 3,908,285 - Psest_3734 0.87 -0.3 3,908,285 - Psest_3734 0.87 +0.4 3,908,285 - Psest_3734 0.87 -0.9 3,908,285 - Psest_3734 0.87 +1.3 3,908,285 - Psest_3734 0.87 -1.5 3,908,285 - Psest_3734 0.87 -1.9 3,908,285 - Psest_3734 0.87 +1.0 3,908,285 - Psest_3734 0.87 +0.2 3,908,285 - Psest_3734 0.87 -1.9 3,908,285 - Psest_3734 0.87 +0.3 3,908,285 - Psest_3734 0.87 +0.6 3,908,285 - Psest_3734 0.87 -0.3 3,908,285 - Psest_3734 0.87 -0.1 3,908,326 + -0.1 3,908,326 + +3.3 3,908,326 + -1.2 3,908,326 + -0.1 3,908,326 + +1.3 3,908,326 + -1.1 3,908,326 + -0.9 3,908,327 - -1.8 3,908,839 + Psest_3735 0.69 +3.2 3,908,840 - Psest_3735 0.69 -1.3 3,908,958 - +0.9 3,908,971 + +0.5 3,908,971 + +1.9 3,908,971 + -0.3 3,908,972 - -1.4 3,908,972 - -0.5 3,908,972 - -1.9 3,908,972 - -0.3 3,908,972 - -0.6 3,908,972 - -1.8 3,908,972 - -1.1 3,908,972 - -1.5 3,909,305 + Psest_3736 0.69 +0.1 3,909,306 - Psest_3736 0.69 +0.3 3,909,306 - Psest_3736 0.69 -3.8 3,909,464 - -1.1 3,909,464 - -1.2 3,909,593 + Psest_3737 0.21 +2.0 3,909,593 + Psest_3737 0.21 -1.2 3,909,593 + Psest_3737 0.21 +0.3 3,909,594 - Psest_3737 0.21 +0.0 3,909,594 - Psest_3737 0.21 -3.0 3,909,594 - Psest_3737 0.21 +0.7 3,909,594 - Psest_3737 0.21 -0.9 3,909,594 - Psest_3737 0.21 -2.0 3,909,594 - Psest_3737 0.21 +0.9 3,909,647 + Psest_3737 0.30 -0.7 3,909,648 - Psest_3737 0.30 +3.4 3,909,648 - Psest_3737 0.30 -2.9 3,909,974 + Psest_3737 0.81 +0.8
Or see this region's nucleotide sequence