Experiment: Furfuryl Alcohol 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3497 and Psest_3498 are separated by 105 nucleotides Psest_3498 and Psest_3499 overlap by 4 nucleotides Psest_3499 and Psest_3500 are separated by 74 nucleotides
Psest_3497: Psest_3497 - Predicted metalloprotease, at 3,669,710 to 3,670,567
_3497
Psest_3498: Psest_3498 - haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E, at 3,670,673 to 3,671,275
_3498
Psest_3499: Psest_3499 - acyl-CoA thioesterase II, at 3,671,272 to 3,672,141
_3499
Psest_3500: Psest_3500 - Acetyltransferases, including N-acetylases of ribosomal proteins, at 3,672,216 to 3,672,770
_3500
Position (kb)
3670
3671
3672 Strain fitness (log2 ratio)
-1
0
1
2 at 3669.744 kb on + strand at 3669.745 kb on - strand at 3669.809 kb on - strand, within Psest_3497 at 3670.088 kb on + strand, within Psest_3497 at 3670.088 kb on + strand, within Psest_3497 at 3670.089 kb on - strand, within Psest_3497 at 3670.181 kb on + strand, within Psest_3497 at 3670.181 kb on + strand, within Psest_3497 at 3670.181 kb on + strand, within Psest_3497 at 3670.181 kb on + strand, within Psest_3497 at 3670.182 kb on - strand at 3670.182 kb on - strand, within Psest_3497 at 3670.182 kb on - strand, within Psest_3497 at 3670.182 kb on - strand, within Psest_3497 at 3670.565 kb on + strand at 3670.629 kb on - strand at 3670.726 kb on - strand at 3670.726 kb on - strand at 3671.077 kb on - strand, within Psest_3498 at 3671.402 kb on + strand, within Psest_3499 at 3671.402 kb on + strand, within Psest_3499 at 3671.402 kb on + strand, within Psest_3499 at 3671.402 kb on + strand, within Psest_3499 at 3671.540 kb on + strand, within Psest_3499 at 3671.552 kb on + strand, within Psest_3499 at 3671.552 kb on + strand, within Psest_3499 at 3671.552 kb on + strand, within Psest_3499 at 3671.552 kb on + strand, within Psest_3499 at 3671.552 kb on + strand, within Psest_3499 at 3671.553 kb on - strand, within Psest_3499 at 3671.553 kb on - strand, within Psest_3499 at 3671.553 kb on - strand, within Psest_3499 at 3671.553 kb on - strand, within Psest_3499 at 3671.916 kb on - strand, within Psest_3499 at 3671.955 kb on - strand, within Psest_3499 at 3672.131 kb on - strand at 3672.131 kb on - strand at 3672.131 kb on - strand at 3672.217 kb on + strand at 3672.218 kb on - strand at 3672.218 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.05 vol% remove 3,669,744 + -1.3 3,669,745 - +0.6 3,669,809 - Psest_3497 0.12 +1.7 3,670,088 + Psest_3497 0.44 +0.2 3,670,088 + Psest_3497 0.44 -0.8 3,670,089 - Psest_3497 0.44 -1.6 3,670,181 + Psest_3497 0.55 -1.3 3,670,181 + Psest_3497 0.55 +1.7 3,670,181 + Psest_3497 0.55 +1.9 3,670,181 + Psest_3497 0.55 -0.3 3,670,182 - +1.7 3,670,182 - Psest_3497 0.55 +0.0 3,670,182 - Psest_3497 0.55 -0.8 3,670,182 - Psest_3497 0.55 +0.2 3,670,565 + -0.3 3,670,629 - -0.5 3,670,726 - +0.7 3,670,726 - -0.8 3,671,077 - Psest_3498 0.67 +0.2 3,671,402 + Psest_3499 0.15 +1.7 3,671,402 + Psest_3499 0.15 -1.4 3,671,402 + Psest_3499 0.15 +2.5 3,671,402 + Psest_3499 0.15 +0.7 3,671,540 + Psest_3499 0.31 -0.3 3,671,552 + Psest_3499 0.32 +1.0 3,671,552 + Psest_3499 0.32 +1.7 3,671,552 + Psest_3499 0.32 -0.7 3,671,552 + Psest_3499 0.32 -0.3 3,671,552 + Psest_3499 0.32 +0.6 3,671,553 - Psest_3499 0.32 +0.9 3,671,553 - Psest_3499 0.32 -1.3 3,671,553 - Psest_3499 0.32 +1.2 3,671,553 - Psest_3499 0.32 +0.2 3,671,916 - Psest_3499 0.74 +0.8 3,671,955 - Psest_3499 0.79 -0.3 3,672,131 - -0.3 3,672,131 - +0.7 3,672,131 - +2.3 3,672,217 + +0.6 3,672,218 - +0.6 3,672,218 - +2.2
Or see this region's nucleotide sequence