Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3169

Experiment: Furfuryl Alcohol 0.05 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Furfuryl Alcohol 0.05 vol%
3,340,114	+		Psest_3166	0.88	-0.5
3,340,114	+		Psest_3166	0.88	-1.1
3,340,115	-		Psest_3166	0.88	+2.9
3,340,115	-		Psest_3166	0.88	-1.6
3,340,415	-				+0.2
3,340,496	+		Psest_3167	0.48	-0.3
3,340,496	+		Psest_3167	0.48	-0.2
3,340,497	-		Psest_3167	0.49	-0.5
3,340,497	-		Psest_3167	0.49	-1.7
3,340,508	-		Psest_3167	0.56	-0.3
3,340,508	-		Psest_3167	0.56	+3.9
3,340,528	+		Psest_3167	0.68	+0.9
3,340,529	-		Psest_3167	0.68	-2.2
3,340,529	-		Psest_3167	0.68	+2.0
3,340,563	+		Psest_3167	0.89	+0.2
3,340,563	+		Psest_3167	0.89	-0.1
3,340,563	+		Psest_3167	0.89	-0.0
3,340,563	+		Psest_3167	0.89	-2.7
3,340,563	+		Psest_3167	0.89	-4.0
3,340,563	+		Psest_3167	0.89	-0.7
3,340,563	+		Psest_3167	0.89	-3.9
3,340,563	+		Psest_3167	0.89	+1.2
3,340,563	+		Psest_3167	0.89	-1.1
3,340,563	+		Psest_3167	0.89	+0.7
3,340,563	+		Psest_3167	0.89	-0.4
3,340,564	-				-0.5
3,340,564	-				-0.2
3,340,564	-				-0.7
3,340,564	-				+0.3
3,340,564	-				-2.7
3,340,564	-				+4.4
3,340,564	-				+1.6
3,340,575	+				+0.1
3,340,576	-				+0.5
3,340,576	-				+0.1
3,340,700	+		Psest_3168	0.25	-2.0
3,340,701	-		Psest_3168	0.25	+1.2
3,340,940	+		Psest_3168	0.77	-1.7
3,340,941	-		Psest_3168	0.78	+0.8
3,341,029	+				+1.2
3,341,029	+				-1.1
3,341,030	-				+0.6
3,341,035	+				+1.2
3,341,035	+				+0.0
3,341,035	+				+1.1
3,341,035	+				+2.2
3,341,035	+				+0.7
3,341,035	+				+1.3
3,341,035	+				-0.7
3,341,035	+				+0.7
3,341,035	+				-0.8
3,341,035	+				+1.2
3,341,036	-				-2.7
3,341,036	-				-0.2
3,341,036	-				+0.3
3,341,036	-				-0.6
3,341,036	-				-1.5
3,341,036	-				-0.6
3,341,036	-				+2.1
3,341,036	-				-0.2
3,341,391	+		Psest_3170	0.21	-0.9
3,341,391	+		Psest_3170	0.21	-2.3
3,341,391	+		Psest_3170	0.21	-3.3
3,341,392	-		Psest_3170	0.21	+0.5
3,341,392	-		Psest_3170	0.21	+0.1
3,341,559	+		Psest_3170	0.57	-1.0
3,341,559	+		Psest_3170	0.57	-1.1
3,341,559	+		Psest_3170	0.57	-2.4
3,341,559	+		Psest_3170	0.57	-1.8
3,341,597	+		Psest_3170	0.65	-1.4
3,341,824	+				-0.7
3,341,825	-				+1.7
3,341,831	+				-2.5
3,341,831	+				-1.3
3,341,832	-				-0.6
3,341,862	+				-0.4
3,341,862	+				+0.7
3,341,863	-				-2.7
3,341,920	+				+1.0
3,341,920	+				-0.8
3,341,956	+				+2.3
3,341,961	+				+3.9
3,341,961	+				-1.3
3,341,961	+				-0.5
3,341,961	+				-1.0
3,341,962	-				-0.8
3,341,991	+				+2.2
3,342,141	+		Psest_3171	0.20	+2.9
3,342,141	+		Psest_3171	0.20	-1.8
3,342,141	+		Psest_3171	0.20	-0.6
3,342,141	+		Psest_3171	0.20	-3.7
3,342,141	+		Psest_3171	0.20	-0.7
3,342,141	+		Psest_3171	0.20	-2.9
3,342,141	+		Psest_3171	0.20	-1.4
3,342,141	+		Psest_3171	0.20	-3.3
3,342,142	-		Psest_3171	0.20	-1.4
3,342,142	-		Psest_3171	0.20	+2.1
3,342,142	-		Psest_3171	0.20	-3.3
3,342,142	-		Psest_3171	0.20	-0.1
3,342,142	-		Psest_3171	0.20	+0.8
3,342,142	-		Psest_3171	0.20	+1.2
3,342,183	+		Psest_3171	0.23	-2.1
3,342,183	+		Psest_3171	0.23	+1.1
3,342,183	+		Psest_3171	0.23	+0.4
3,342,183	+		Psest_3171	0.23	+2.3
3,342,183	+		Psest_3171	0.23	+0.2
3,342,183	+		Psest_3171	0.23	+1.2
3,342,183	+		Psest_3171	0.23	-1.4
3,342,183	+		Psest_3171	0.23	-0.5
3,342,183	+		Psest_3171	0.23	+2.0
3,342,183	+		Psest_3171	0.23	+2.2
3,342,183	+		Psest_3171	0.23	-1.1
3,342,183	+		Psest_3171	0.23	-0.6
3,342,183	+		Psest_3171	0.23	-2.1
3,342,183	+		Psest_3171	0.23	-2.9
3,342,184	-		Psest_3171	0.23	-1.0
3,342,184	-		Psest_3171	0.23	+1.4
3,342,184	-		Psest_3171	0.23	-1.3
3,342,184	-		Psest_3171	0.23	-3.5
3,342,184	-		Psest_3171	0.23	-1.1
3,342,184	-		Psest_3171	0.23	-0.4
3,342,184	-		Psest_3171	0.23	+0.8