Experiment: Furfuryl Alcohol 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3156 and Psest_3157 are separated by 919 nucleotides Psest_3157 and Psest_3158 are separated by 534 nucleotides
Psest_3156: Psest_3156 - Site-specific recombinases, DNA invertase Pin homologs, at 3,325,614 to 3,326,156
_3156
Psest_3157: Psest_3157 - hypothetical protein, at 3,327,076 to 3,327,231
_3157
Psest_3158: Psest_3158 - hypothetical protein, at 3,327,766 to 3,328,077
_3158
Position (kb)
3327
3328 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3326.210 kb on - strand at 3326.210 kb on - strand at 3326.210 kb on - strand at 3326.210 kb on - strand at 3326.210 kb on - strand at 3326.215 kb on + strand at 3326.216 kb on - strand at 3326.216 kb on - strand at 3326.216 kb on - strand at 3326.261 kb on + strand at 3326.261 kb on + strand at 3326.262 kb on - strand at 3326.262 kb on - strand at 3326.262 kb on - strand at 3326.264 kb on - strand at 3326.272 kb on + strand at 3326.304 kb on + strand at 3326.304 kb on + strand at 3326.305 kb on - strand at 3326.305 kb on - strand at 3326.305 kb on - strand at 3326.308 kb on + strand at 3326.308 kb on + strand at 3326.308 kb on + strand at 3326.308 kb on + strand at 3326.308 kb on + strand at 3326.308 kb on + strand at 3326.308 kb on + strand at 3326.308 kb on + strand at 3326.309 kb on - strand at 3326.309 kb on - strand at 3326.309 kb on - strand at 3326.342 kb on + strand at 3326.343 kb on - strand at 3326.390 kb on + strand at 3326.525 kb on - strand at 3326.533 kb on - strand at 3326.564 kb on + strand at 3326.564 kb on + strand at 3326.564 kb on + strand at 3326.565 kb on - strand at 3326.565 kb on - strand at 3326.568 kb on + strand at 3326.569 kb on - strand at 3326.695 kb on - strand at 3326.695 kb on - strand at 3326.695 kb on - strand at 3326.695 kb on - strand at 3326.695 kb on - strand at 3326.727 kb on + strand at 3326.727 kb on + strand at 3326.727 kb on + strand at 3326.728 kb on - strand at 3326.728 kb on - strand at 3326.728 kb on - strand at 3326.728 kb on - strand at 3326.728 kb on - strand at 3326.728 kb on - strand at 3326.728 kb on - strand at 3326.767 kb on + strand at 3326.768 kb on - strand at 3326.768 kb on - strand at 3326.807 kb on + strand at 3326.808 kb on - strand at 3326.811 kb on + strand at 3326.811 kb on + strand at 3326.811 kb on + strand at 3326.812 kb on - strand at 3326.874 kb on + strand at 3326.875 kb on - strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.893 kb on + strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.894 kb on - strand at 3326.895 kb on + strand at 3326.895 kb on + strand at 3326.895 kb on + strand at 3326.896 kb on - strand at 3326.896 kb on - strand at 3326.896 kb on - strand at 3326.897 kb on + strand at 3326.897 kb on + strand at 3326.897 kb on + strand at 3326.897 kb on + strand at 3326.898 kb on - strand at 3326.898 kb on - strand at 3326.898 kb on - strand at 3326.898 kb on - strand at 3326.898 kb on - strand at 3326.898 kb on - strand at 3326.898 kb on - strand at 3326.937 kb on + strand at 3326.937 kb on + strand at 3326.981 kb on + strand at 3326.981 kb on + strand at 3326.981 kb on + strand at 3326.981 kb on + strand at 3326.982 kb on - strand at 3326.982 kb on - strand at 3327.016 kb on - strand at 3327.058 kb on + strand at 3327.058 kb on + strand at 3327.058 kb on + strand at 3327.058 kb on + strand at 3327.059 kb on - strand at 3327.059 kb on - strand at 3327.059 kb on - strand at 3327.059 kb on - strand at 3327.059 kb on - strand at 3327.059 kb on - strand at 3327.064 kb on + strand at 3327.104 kb on - strand, within Psest_3157 at 3327.104 kb on - strand, within Psest_3157 at 3327.104 kb on - strand, within Psest_3157 at 3327.179 kb on + strand, within Psest_3157 at 3327.180 kb on - strand, within Psest_3157 at 3327.180 kb on - strand, within Psest_3157 at 3327.180 kb on - strand, within Psest_3157 at 3327.185 kb on + strand, within Psest_3157 at 3327.185 kb on + strand, within Psest_3157 at 3327.185 kb on + strand, within Psest_3157 at 3327.186 kb on - strand, within Psest_3157 at 3327.186 kb on - strand, within Psest_3157 at 3327.186 kb on - strand, within Psest_3157 at 3327.186 kb on - strand, within Psest_3157 at 3327.186 kb on - strand, within Psest_3157 at 3327.214 kb on + strand, within Psest_3157 at 3327.215 kb on - strand, within Psest_3157 at 3327.231 kb on + strand at 3327.232 kb on - strand at 3327.312 kb on - strand at 3327.344 kb on + strand at 3327.350 kb on + strand at 3327.350 kb on + strand at 3327.351 kb on - strand at 3327.351 kb on - strand at 3327.351 kb on - strand at 3327.571 kb on + strand at 3327.571 kb on + strand at 3327.680 kb on + strand at 3327.684 kb on + strand at 3327.685 kb on - strand at 3327.739 kb on + strand at 3327.739 kb on + strand at 3327.739 kb on + strand at 3327.740 kb on - strand at 3327.740 kb on - strand at 3327.740 kb on - strand at 3327.786 kb on + strand at 3327.787 kb on - strand at 3327.820 kb on - strand, within Psest_3158 at 3327.848 kb on + strand, within Psest_3158 at 3327.848 kb on + strand, within Psest_3158 at 3327.848 kb on + strand, within Psest_3158 at 3327.848 kb on + strand, within Psest_3158 at 3327.848 kb on + strand, within Psest_3158 at 3327.849 kb on - strand, within Psest_3158 at 3327.849 kb on - strand, within Psest_3158 at 3327.849 kb on - strand, within Psest_3158 at 3327.879 kb on + strand, within Psest_3158 at 3327.924 kb on - strand, within Psest_3158 at 3328.045 kb on + strand, within Psest_3158 at 3328.091 kb on + strand at 3328.103 kb on - strand at 3328.129 kb on + strand at 3328.129 kb on + strand at 3328.130 kb on - strand at 3328.161 kb on + strand at 3328.161 kb on + strand at 3328.161 kb on + strand at 3328.161 kb on + strand at 3328.162 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.05 vol% remove 3,326,210 - -3.3 3,326,210 - -2.8 3,326,210 - -0.0 3,326,210 - -1.7 3,326,210 - +0.1 3,326,215 + -1.4 3,326,216 - -3.3 3,326,216 - +0.6 3,326,216 - +0.9 3,326,261 + +1.1 3,326,261 + +0.5 3,326,262 - -0.5 3,326,262 - +3.6 3,326,262 - +0.3 3,326,264 - -3.8 3,326,272 + +0.4 3,326,304 + -2.3 3,326,304 + -1.2 3,326,305 - +0.9 3,326,305 - -0.1 3,326,305 - +1.9 3,326,308 + +0.6 3,326,308 + +1.0 3,326,308 + +0.8 3,326,308 + +0.3 3,326,308 + -3.0 3,326,308 + +0.4 3,326,308 + -3.6 3,326,308 + +1.1 3,326,309 - +0.4 3,326,309 - +1.8 3,326,309 - -4.4 3,326,342 + -1.0 3,326,343 - +1.3 3,326,390 + +0.3 3,326,525 - -3.2 3,326,533 - +1.8 3,326,564 + -1.1 3,326,564 + -0.5 3,326,564 + +1.2 3,326,565 - -2.6 3,326,565 - +1.0 3,326,568 + +0.1 3,326,569 - -3.6 3,326,695 - +2.3 3,326,695 - -2.2 3,326,695 - -3.6 3,326,695 - +0.7 3,326,695 - -4.3 3,326,727 + -1.6 3,326,727 + +2.6 3,326,727 + -0.6 3,326,728 - -1.5 3,326,728 - -1.3 3,326,728 - -1.8 3,326,728 - +0.3 3,326,728 - -0.7 3,326,728 - -0.4 3,326,728 - -4.2 3,326,767 + +0.5 3,326,768 - +0.0 3,326,768 - -0.9 3,326,807 + +0.1 3,326,808 - -2.4 3,326,811 + -3.3 3,326,811 + -0.3 3,326,811 + -1.5 3,326,812 - +1.2 3,326,874 + -3.8 3,326,875 - +0.2 3,326,893 + +0.3 3,326,893 + -1.3 3,326,893 + -3.1 3,326,893 + +1.3 3,326,893 + -2.0 3,326,893 + +0.2 3,326,893 + -2.1 3,326,893 + -1.1 3,326,893 + +1.2 3,326,893 + -0.7 3,326,893 + -0.4 3,326,893 + -2.5 3,326,893 + -2.5 3,326,893 + -0.4 3,326,893 + -0.8 3,326,893 + -0.6 3,326,893 + +0.4 3,326,893 + +0.6 3,326,893 + -3.6 3,326,893 + -0.9 3,326,893 + -1.9 3,326,893 + +0.6 3,326,893 + -2.9 3,326,893 + +2.3 3,326,893 + +1.3 3,326,893 + +1.2 3,326,893 + -1.2 3,326,893 + -1.1 3,326,893 + -0.9 3,326,893 + +1.5 3,326,893 + -0.9 3,326,893 + -1.3 3,326,893 + +0.8 3,326,893 + -0.9 3,326,893 + -4.6 3,326,893 + -3.8 3,326,893 + -1.8 3,326,893 + +0.9 3,326,893 + +0.2 3,326,893 + -0.8 3,326,893 + -1.4 3,326,894 - +3.0 3,326,894 - +0.5 3,326,894 - -0.1 3,326,894 - -1.8 3,326,894 - +1.1 3,326,894 - +0.7 3,326,894 - +1.0 3,326,894 - +2.6 3,326,894 - -0.1 3,326,894 - -2.4 3,326,894 - +0.5 3,326,894 - +0.3 3,326,894 - -1.5 3,326,894 - +0.3 3,326,894 - -3.9 3,326,894 - +0.0 3,326,894 - +0.0 3,326,894 - -3.9 3,326,894 - -1.0 3,326,894 - +0.2 3,326,894 - +0.9 3,326,894 - +0.3 3,326,894 - +1.2 3,326,894 - +0.2 3,326,894 - -0.9 3,326,894 - +0.5 3,326,894 - +2.2 3,326,894 - -1.6 3,326,894 - +0.1 3,326,894 - +0.6 3,326,894 - -2.6 3,326,894 - +0.6 3,326,894 - -1.6 3,326,895 + +2.1 3,326,895 + -3.3 3,326,895 + +1.0 3,326,896 - -1.7 3,326,896 - +0.3 3,326,896 - -0.5 3,326,897 + -1.4 3,326,897 + -3.9 3,326,897 + +0.4 3,326,897 + -0.9 3,326,898 - +0.1 3,326,898 - +0.4 3,326,898 - -2.1 3,326,898 - -1.0 3,326,898 - +0.9 3,326,898 - -2.2 3,326,898 - +1.0 3,326,937 + -0.7 3,326,937 + +0.7 3,326,981 + -0.0 3,326,981 + -3.4 3,326,981 + -1.6 3,326,981 + -0.1 3,326,982 - +2.5 3,326,982 - -4.7 3,327,016 - +0.5 3,327,058 + -0.6 3,327,058 + +0.0 3,327,058 + -1.6 3,327,058 + +0.8 3,327,059 - -2.5 3,327,059 - -2.4 3,327,059 - -2.7 3,327,059 - -2.5 3,327,059 - -4.3 3,327,059 - -4.1 3,327,064 + +1.3 3,327,104 - Psest_3157 0.18 -3.1 3,327,104 - Psest_3157 0.18 -2.9 3,327,104 - Psest_3157 0.18 -3.5 3,327,179 + Psest_3157 0.66 -2.2 3,327,180 - Psest_3157 0.67 -1.4 3,327,180 - Psest_3157 0.67 -0.1 3,327,180 - Psest_3157 0.67 -2.8 3,327,185 + Psest_3157 0.70 -0.3 3,327,185 + Psest_3157 0.70 +0.8 3,327,185 + Psest_3157 0.70 +2.0 3,327,186 - Psest_3157 0.71 -0.6 3,327,186 - Psest_3157 0.71 -0.0 3,327,186 - Psest_3157 0.71 -2.6 3,327,186 - Psest_3157 0.71 -2.6 3,327,186 - Psest_3157 0.71 -1.7 3,327,214 + Psest_3157 0.88 -1.2 3,327,215 - Psest_3157 0.89 -2.6 3,327,231 + -3.1 3,327,232 - -4.1 3,327,312 - -4.3 3,327,344 + +1.5 3,327,350 + -1.4 3,327,350 + +3.6 3,327,351 - +1.4 3,327,351 - -2.7 3,327,351 - +0.8 3,327,571 + +2.2 3,327,571 + +1.1 3,327,680 + -4.4 3,327,684 + +1.1 3,327,685 - +0.4 3,327,739 + -0.5 3,327,739 + -0.9 3,327,739 + +1.1 3,327,740 - -3.5 3,327,740 - -0.1 3,327,740 - -0.4 3,327,786 + +1.2 3,327,787 - -0.4 3,327,820 - Psest_3158 0.17 +0.0 3,327,848 + Psest_3158 0.26 -0.7 3,327,848 + Psest_3158 0.26 +0.1 3,327,848 + Psest_3158 0.26 +2.2 3,327,848 + Psest_3158 0.26 -0.6 3,327,848 + Psest_3158 0.26 +0.1 3,327,849 - Psest_3158 0.27 -4.6 3,327,849 - Psest_3158 0.27 +1.6 3,327,849 - Psest_3158 0.27 -0.0 3,327,879 + Psest_3158 0.36 -2.6 3,327,924 - Psest_3158 0.51 -3.4 3,328,045 + Psest_3158 0.89 +1.7 3,328,091 + -0.9 3,328,103 - +1.1 3,328,129 + -0.5 3,328,129 + +2.0 3,328,130 - +1.6 3,328,161 + +1.6 3,328,161 + -1.3 3,328,161 + +1.4 3,328,161 + -0.0 3,328,162 - -0.5
Or see this region's nucleotide sequence