Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2826

Experiment: Furfuryl Alcohol 0.05 vol%

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntPsest_2825 and Psest_2826 are separated by 138 nucleotidesPsest_2826 and Psest_2827 are separated by 184 nucleotides Psest_2825: Psest_2825 - tRNA(Ile)-lysidine synthetase, N-terminal domain/tRNA(Ile)-lysidine synthetase, C-terminal domain, at 3,013,043 to 3,014,332 _2825 Psest_2826: Psest_2826 - acetyl-CoA carboxylase, carboxyl transferase, alpha subunit, at 3,014,471 to 3,015,421 _2826 Psest_2827: Psest_2827 - DNA-directed DNA polymerase III (polc), at 3,015,606 to 3,019,127 _2827 Position (kb) 3014 3015 3016Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 3014.368 kb on + strandat 3014.407 kb on + strandat 3014.407 kb on + strandat 3014.407 kb on + strandat 3014.407 kb on + strandat 3014.407 kb on + strandat 3014.408 kb on - strandat 3014.408 kb on - strandat 3014.408 kb on - strandat 3014.408 kb on - strandat 3014.408 kb on - strandat 3014.408 kb on - strandat 3014.408 kb on - strandat 3014.408 kb on - strandat 3014.408 kb on - strandat 3014.408 kb on - strandat 3014.414 kb on + strandat 3014.414 kb on + strandat 3014.414 kb on + strandat 3014.414 kb on + strandat 3014.414 kb on + strandat 3014.414 kb on + strandat 3014.414 kb on + strandat 3014.414 kb on + strandat 3014.414 kb on + strandat 3014.414 kb on + strandat 3014.414 kb on - strandat 3014.415 kb on - strandat 3014.415 kb on - strandat 3014.415 kb on - strandat 3014.415 kb on - strandat 3014.415 kb on - strandat 3014.415 kb on - strandat 3014.485 kb on - strandat 3014.485 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.05 vol%
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3,014,368 + -2.2
3,014,407 + +0.2
3,014,407 + +0.0
3,014,407 + +0.5
3,014,407 + +0.1
3,014,407 + -2.0
3,014,408 - +1.6
3,014,408 - -1.0
3,014,408 - -2.0
3,014,408 - -0.6
3,014,408 - +1.1
3,014,408 - -0.6
3,014,408 - -0.2
3,014,408 - -0.3
3,014,408 - -2.5
3,014,408 - -0.6
3,014,414 + -1.8
3,014,414 + -0.9
3,014,414 + -0.5
3,014,414 + +0.2
3,014,414 + -4.0
3,014,414 + -0.4
3,014,414 + +1.2
3,014,414 + -0.1
3,014,414 + +0.8
3,014,414 + -2.1
3,014,414 - -3.0
3,014,415 - +1.5
3,014,415 - -1.5
3,014,415 - -0.5
3,014,415 - -0.7
3,014,415 - -1.0
3,014,415 - -2.2
3,014,485 - -1.5
3,014,485 - +3.2

Or see this region's nucleotide sequence