Experiment: Furfuryl Alcohol 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2733 and Psest_2735 are separated by 600 nucleotides Psest_2735 and Psest_2736 are separated by 179 nucleotides Psest_2736 and Psest_2737 are separated by 141 nucleotides
Psest_2733: Psest_2733 - Uncharacterized protein conserved in bacteria (DUF2188)., at 2,925,152 to 2,925,376
_2733
Psest_2735: Psest_2735 - hypothetical protein, at 2,925,977 to 2,926,651
_2735
Psest_2736: Psest_2736 - Transposase and inactivated derivatives, at 2,926,831 to 2,927,361
_2736
Psest_2737: Psest_2737 - Restriction endonuclease, at 2,927,503 to 2,928,399
_2737
Position (kb)
2925
2926
2927 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 2924.993 kb on - strand at 2925.044 kb on + strand at 2925.044 kb on + strand at 2925.045 kb on - strand at 2925.045 kb on - strand at 2925.045 kb on - strand at 2925.045 kb on - strand at 2925.045 kb on - strand at 2925.089 kb on - strand at 2925.111 kb on - strand at 2925.130 kb on + strand at 2925.130 kb on + strand at 2925.130 kb on + strand at 2925.131 kb on - strand at 2925.131 kb on - strand at 2925.131 kb on - strand at 2925.131 kb on - strand at 2925.144 kb on + strand at 2925.144 kb on + strand at 2925.144 kb on + strand at 2925.144 kb on + strand at 2925.144 kb on + strand at 2925.144 kb on + strand at 2925.144 kb on + strand at 2925.145 kb on - strand at 2925.145 kb on - strand at 2925.145 kb on - strand at 2925.148 kb on + strand at 2925.148 kb on + strand at 2925.148 kb on + strand at 2925.148 kb on + strand at 2925.148 kb on + strand at 2925.148 kb on + strand at 2925.149 kb on - strand at 2925.149 kb on - strand at 2925.191 kb on - strand, within Psest_2733 at 2925.191 kb on - strand, within Psest_2733 at 2925.191 kb on - strand, within Psest_2733 at 2925.191 kb on - strand, within Psest_2733 at 2925.191 kb on - strand, within Psest_2733 at 2925.214 kb on + strand, within Psest_2733 at 2925.220 kb on + strand, within Psest_2733 at 2925.220 kb on + strand, within Psest_2733 at 2925.220 kb on + strand, within Psest_2733 at 2925.220 kb on + strand, within Psest_2733 at 2925.220 kb on + strand, within Psest_2733 at 2925.226 kb on + strand, within Psest_2733 at 2925.227 kb on - strand, within Psest_2733 at 2925.389 kb on + strand at 2925.389 kb on + strand at 2925.389 kb on + strand at 2925.389 kb on + strand at 2925.389 kb on + strand at 2925.389 kb on + strand at 2925.389 kb on + strand at 2925.389 kb on + strand at 2925.389 kb on + strand at 2925.389 kb on + strand at 2925.389 kb on + strand at 2925.389 kb on + strand at 2925.389 kb on + strand at 2925.390 kb on - strand at 2925.390 kb on - strand at 2925.390 kb on - strand at 2925.390 kb on - strand at 2925.390 kb on - strand at 2925.390 kb on - strand at 2925.390 kb on - strand at 2925.390 kb on - strand at 2925.391 kb on + strand at 2925.391 kb on + strand at 2925.391 kb on + strand at 2925.391 kb on + strand at 2925.391 kb on + strand at 2925.391 kb on + strand at 2925.391 kb on + strand at 2925.391 kb on + strand at 2925.392 kb on - strand at 2925.392 kb on - strand at 2925.392 kb on - strand at 2925.392 kb on - strand at 2925.392 kb on - strand at 2925.392 kb on - strand at 2925.516 kb on + strand at 2925.721 kb on + strand at 2925.907 kb on + strand at 2925.931 kb on + strand at 2925.931 kb on + strand at 2925.932 kb on - strand at 2925.932 kb on - strand at 2925.932 kb on - strand at 2925.932 kb on - strand at 2925.932 kb on - strand at 2925.935 kb on + strand at 2925.935 kb on + strand at 2925.936 kb on - strand at 2925.936 kb on - strand at 2925.936 kb on - strand at 2925.936 kb on - strand at 2925.936 kb on - strand at 2925.954 kb on - strand at 2925.954 kb on - strand at 2926.047 kb on + strand, within Psest_2735 at 2926.182 kb on + strand, within Psest_2735 at 2926.182 kb on + strand, within Psest_2735 at 2926.183 kb on - strand, within Psest_2735 at 2926.183 kb on - strand, within Psest_2735 at 2926.183 kb on - strand, within Psest_2735 at 2926.189 kb on - strand, within Psest_2735 at 2926.213 kb on + strand, within Psest_2735 at 2926.214 kb on - strand, within Psest_2735 at 2926.214 kb on - strand, within Psest_2735 at 2926.217 kb on + strand, within Psest_2735 at 2926.217 kb on + strand, within Psest_2735 at 2926.218 kb on - strand, within Psest_2735 at 2926.320 kb on - strand, within Psest_2735 at 2926.320 kb on - strand, within Psest_2735 at 2926.320 kb on - strand, within Psest_2735 at 2926.320 kb on - strand, within Psest_2735 at 2926.363 kb on + strand, within Psest_2735 at 2926.363 kb on + strand, within Psest_2735 at 2926.363 kb on + strand, within Psest_2735 at 2926.363 kb on + strand, within Psest_2735 at 2926.380 kb on - strand, within Psest_2735 at 2926.380 kb on - strand, within Psest_2735 at 2926.380 kb on - strand, within Psest_2735 at 2926.380 kb on - strand, within Psest_2735 at 2926.395 kb on - strand, within Psest_2735 at 2926.395 kb on - strand, within Psest_2735 at 2926.395 kb on - strand, within Psest_2735 at 2926.395 kb on - strand, within Psest_2735 at 2926.468 kb on + strand, within Psest_2735 at 2926.478 kb on + strand, within Psest_2735 at 2926.581 kb on + strand, within Psest_2735 at 2926.582 kb on - strand, within Psest_2735 at 2926.582 kb on - strand, within Psest_2735 at 2926.646 kb on - strand at 2926.870 kb on + strand at 2926.870 kb on + strand at 2927.109 kb on - strand, within Psest_2736 at 2927.213 kb on - strand, within Psest_2736 at 2927.213 kb on - strand, within Psest_2736 at 2927.213 kb on - strand, within Psest_2736 at 2927.313 kb on + strand at 2927.393 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.05 vol% remove 2,924,993 - -0.4 2,925,044 + -3.1 2,925,044 + -0.8 2,925,045 - -2.1 2,925,045 - -0.4 2,925,045 - -2.0 2,925,045 - -2.5 2,925,045 - +3.6 2,925,089 - -0.7 2,925,111 - -1.1 2,925,130 + +0.1 2,925,130 + -0.9 2,925,130 + +2.9 2,925,131 - -0.1 2,925,131 - -0.2 2,925,131 - -1.0 2,925,131 - -2.9 2,925,144 + +0.4 2,925,144 + +1.0 2,925,144 + +2.4 2,925,144 + -0.6 2,925,144 + +0.3 2,925,144 + -1.6 2,925,144 + +1.1 2,925,145 - -0.3 2,925,145 - -0.1 2,925,145 - -0.5 2,925,148 + +0.9 2,925,148 + -0.8 2,925,148 + +3.1 2,925,148 + +1.0 2,925,148 + -0.2 2,925,148 + -2.4 2,925,149 - -3.3 2,925,149 - -2.6 2,925,191 - Psest_2733 0.17 -2.1 2,925,191 - Psest_2733 0.17 -0.4 2,925,191 - Psest_2733 0.17 -0.7 2,925,191 - Psest_2733 0.17 -0.5 2,925,191 - Psest_2733 0.17 +1.5 2,925,214 + Psest_2733 0.28 +0.3 2,925,220 + Psest_2733 0.30 -1.9 2,925,220 + Psest_2733 0.30 +0.3 2,925,220 + Psest_2733 0.30 +1.1 2,925,220 + Psest_2733 0.30 -0.7 2,925,220 + Psest_2733 0.30 +1.3 2,925,226 + Psest_2733 0.33 +0.9 2,925,227 - Psest_2733 0.33 +0.5 2,925,389 + -0.0 2,925,389 + -0.1 2,925,389 + -3.6 2,925,389 + -1.2 2,925,389 + +0.9 2,925,389 + -1.2 2,925,389 + +0.4 2,925,389 + -2.4 2,925,389 + -2.5 2,925,389 + -1.3 2,925,389 + -0.2 2,925,389 + -2.5 2,925,389 + +0.1 2,925,390 - +3.4 2,925,390 - +1.8 2,925,390 - -2.9 2,925,390 - -2.7 2,925,390 - -3.5 2,925,390 - -0.9 2,925,390 - +0.2 2,925,390 - -0.3 2,925,391 + -0.7 2,925,391 + -0.7 2,925,391 + -0.3 2,925,391 + +0.2 2,925,391 + -3.4 2,925,391 + -2.2 2,925,391 + -0.6 2,925,391 + -3.3 2,925,392 - -0.6 2,925,392 - -0.5 2,925,392 - +0.2 2,925,392 - -2.3 2,925,392 - +0.8 2,925,392 - +1.4 2,925,516 + -0.7 2,925,721 + -0.2 2,925,907 + +1.4 2,925,931 + +0.6 2,925,931 + +1.5 2,925,932 - +0.5 2,925,932 - +0.8 2,925,932 - -1.6 2,925,932 - +0.1 2,925,932 - +0.5 2,925,935 + -0.0 2,925,935 + -1.3 2,925,936 - +1.0 2,925,936 - -1.2 2,925,936 - -2.0 2,925,936 - +0.3 2,925,936 - +2.2 2,925,954 - +0.9 2,925,954 - +1.7 2,926,047 + Psest_2735 0.10 -0.1 2,926,182 + Psest_2735 0.30 +0.3 2,926,182 + Psest_2735 0.30 -1.8 2,926,183 - Psest_2735 0.31 -2.8 2,926,183 - Psest_2735 0.31 -2.9 2,926,183 - Psest_2735 0.31 +1.1 2,926,189 - Psest_2735 0.31 -1.2 2,926,213 + Psest_2735 0.35 +1.6 2,926,214 - Psest_2735 0.35 +0.7 2,926,214 - Psest_2735 0.35 +0.8 2,926,217 + Psest_2735 0.36 -2.4 2,926,217 + Psest_2735 0.36 +1.0 2,926,218 - Psest_2735 0.36 +4.5 2,926,320 - Psest_2735 0.51 -0.3 2,926,320 - Psest_2735 0.51 +2.4 2,926,320 - Psest_2735 0.51 +0.7 2,926,320 - Psest_2735 0.51 +0.6 2,926,363 + Psest_2735 0.57 -0.9 2,926,363 + Psest_2735 0.57 +0.2 2,926,363 + Psest_2735 0.57 -0.3 2,926,363 + Psest_2735 0.57 +0.9 2,926,380 - Psest_2735 0.60 +1.6 2,926,380 - Psest_2735 0.60 +0.2 2,926,380 - Psest_2735 0.60 -0.6 2,926,380 - Psest_2735 0.60 +1.7 2,926,395 - Psest_2735 0.62 +0.4 2,926,395 - Psest_2735 0.62 +0.7 2,926,395 - Psest_2735 0.62 +0.5 2,926,395 - Psest_2735 0.62 +0.6 2,926,468 + Psest_2735 0.73 +2.1 2,926,478 + Psest_2735 0.74 -1.8 2,926,581 + Psest_2735 0.89 -0.8 2,926,582 - Psest_2735 0.90 -0.2 2,926,582 - Psest_2735 0.90 +1.1 2,926,646 - +0.9 2,926,870 + +0.9 2,926,870 + +1.0 2,927,109 - Psest_2736 0.52 +0.2 2,927,213 - Psest_2736 0.72 +2.0 2,927,213 - Psest_2736 0.72 -0.2 2,927,213 - Psest_2736 0.72 -0.1 2,927,313 + -1.4 2,927,393 - -0.7
Or see this region's nucleotide sequence