Experiment: Furfuryl Alcohol 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2692 and Psest_2693 are separated by 71 nucleotides Psest_2693 and Psest_2694 are separated by 15 nucleotides Psest_2694 and Psest_2695 are separated by 35 nucleotides
Psest_2692: Psest_2692 - catechol 1,2-dioxygenase, proteobacterial, at 2,881,633 to 2,882,574
_2692
Psest_2693: Psest_2693 - muconolactone delta-isomerase, at 2,882,646 to 2,882,936
_2693
Psest_2694: Psest_2694 - muconate and chloromuconate cycloisomerases, at 2,882,952 to 2,884,073
_2694
Psest_2695: Psest_2695 - Sugar phosphate permease, at 2,884,109 to 2,885,452
_2695
Position (kb)
2882
2883
2884
2885 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2882.009 kb on + strand, within Psest_2692 at 2882.051 kb on + strand, within Psest_2692 at 2882.051 kb on + strand, within Psest_2692 at 2882.051 kb on + strand, within Psest_2692 at 2882.051 kb on + strand, within Psest_2692 at 2882.051 kb on + strand, within Psest_2692 at 2882.051 kb on + strand, within Psest_2692 at 2882.052 kb on - strand, within Psest_2692 at 2882.052 kb on - strand, within Psest_2692 at 2882.075 kb on + strand, within Psest_2692 at 2882.075 kb on + strand, within Psest_2692 at 2882.075 kb on + strand, within Psest_2692 at 2882.076 kb on - strand, within Psest_2692 at 2882.076 kb on - strand, within Psest_2692 at 2882.076 kb on - strand, within Psest_2692 at 2882.081 kb on + strand, within Psest_2692 at 2882.081 kb on + strand, within Psest_2692 at 2882.081 kb on + strand, within Psest_2692 at 2882.081 kb on + strand, within Psest_2692 at 2882.081 kb on + strand, within Psest_2692 at 2882.081 kb on + strand, within Psest_2692 at 2882.081 kb on + strand, within Psest_2692 at 2882.082 kb on - strand, within Psest_2692 at 2882.082 kb on - strand, within Psest_2692 at 2882.082 kb on - strand, within Psest_2692 at 2882.246 kb on + strand, within Psest_2692 at 2882.246 kb on + strand, within Psest_2692 at 2882.246 kb on + strand, within Psest_2692 at 2882.393 kb on + strand, within Psest_2692 at 2882.393 kb on + strand, within Psest_2692 at 2882.566 kb on + strand at 2882.567 kb on - strand at 2882.593 kb on + strand at 2882.593 kb on + strand at 2882.593 kb on + strand at 2882.593 kb on + strand at 2882.593 kb on + strand at 2882.593 kb on + strand at 2882.594 kb on - strand at 2882.594 kb on - strand at 2882.594 kb on - strand at 2882.779 kb on + strand, within Psest_2693 at 2882.779 kb on + strand, within Psest_2693 at 2882.780 kb on - strand, within Psest_2693 at 2882.780 kb on - strand, within Psest_2693 at 2882.780 kb on - strand, within Psest_2693 at 2882.780 kb on - strand, within Psest_2693 at 2882.922 kb on + strand at 2882.954 kb on - strand at 2883.019 kb on - strand at 2884.073 kb on + strand at 2884.089 kb on - strand at 2884.089 kb on - strand at 2884.347 kb on + strand, within Psest_2695 at 2884.347 kb on + strand, within Psest_2695 at 2884.369 kb on - strand, within Psest_2695 at 2884.369 kb on - strand, within Psest_2695 at 2884.422 kb on + strand, within Psest_2695 at 2884.423 kb on - strand, within Psest_2695 at 2884.423 kb on - strand, within Psest_2695 at 2884.423 kb on - strand, within Psest_2695 at 2884.872 kb on + strand, within Psest_2695 at 2884.873 kb on - strand, within Psest_2695 at 2884.953 kb on + strand, within Psest_2695 at 2884.953 kb on + strand, within Psest_2695 at 2884.953 kb on + strand, within Psest_2695 at 2884.953 kb on + strand, within Psest_2695 at 2884.953 kb on + strand, within Psest_2695 at 2884.953 kb on + strand, within Psest_2695 at 2884.953 kb on + strand, within Psest_2695 at 2884.953 kb on + strand, within Psest_2695 at 2884.953 kb on + strand, within Psest_2695 at 2884.953 kb on + strand, within Psest_2695 at 2884.953 kb on + strand, within Psest_2695 at 2884.953 kb on + strand, within Psest_2695 at 2884.953 kb on + strand, within Psest_2695 at 2884.954 kb on - strand, within Psest_2695 at 2884.954 kb on - strand, within Psest_2695 at 2884.954 kb on - strand, within Psest_2695 at 2884.954 kb on - strand, within Psest_2695 at 2884.954 kb on - strand, within Psest_2695 at 2884.954 kb on - strand, within Psest_2695 at 2884.954 kb on - strand, within Psest_2695 at 2884.954 kb on - strand, within Psest_2695 at 2884.954 kb on - strand, within Psest_2695 at 2884.954 kb on - strand, within Psest_2695 at 2884.954 kb on - strand, within Psest_2695 at 2884.954 kb on - strand, within Psest_2695 at 2884.954 kb on - strand, within Psest_2695 at 2884.954 kb on - strand, within Psest_2695 at 2884.954 kb on - strand, within Psest_2695 at 2884.954 kb on - strand, within Psest_2695 at 2884.957 kb on + strand, within Psest_2695 at 2884.957 kb on + strand, within Psest_2695 at 2884.957 kb on + strand, within Psest_2695 at 2884.957 kb on + strand, within Psest_2695 at 2884.958 kb on - strand, within Psest_2695 at 2884.958 kb on - strand, within Psest_2695 at 2884.958 kb on - strand, within Psest_2695 at 2884.958 kb on - strand, within Psest_2695 at 2884.961 kb on + strand, within Psest_2695 at 2884.962 kb on - strand, within Psest_2695 at 2884.962 kb on - strand, within Psest_2695 at 2884.962 kb on - strand, within Psest_2695 at 2885.016 kb on - strand, within Psest_2695
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.05 vol% remove 2,882,009 + Psest_2692 0.40 +3.0 2,882,051 + Psest_2692 0.44 +0.8 2,882,051 + Psest_2692 0.44 +0.4 2,882,051 + Psest_2692 0.44 -1.1 2,882,051 + Psest_2692 0.44 -1.5 2,882,051 + Psest_2692 0.44 -0.6 2,882,051 + Psest_2692 0.44 +0.5 2,882,052 - Psest_2692 0.44 -0.4 2,882,052 - Psest_2692 0.44 +1.0 2,882,075 + Psest_2692 0.47 +0.2 2,882,075 + Psest_2692 0.47 +0.4 2,882,075 + Psest_2692 0.47 -0.6 2,882,076 - Psest_2692 0.47 +1.4 2,882,076 - Psest_2692 0.47 -0.6 2,882,076 - Psest_2692 0.47 -1.5 2,882,081 + Psest_2692 0.48 -3.9 2,882,081 + Psest_2692 0.48 +1.8 2,882,081 + Psest_2692 0.48 +1.3 2,882,081 + Psest_2692 0.48 -0.8 2,882,081 + Psest_2692 0.48 +0.3 2,882,081 + Psest_2692 0.48 -0.2 2,882,081 + Psest_2692 0.48 +1.0 2,882,082 - Psest_2692 0.48 +1.4 2,882,082 - Psest_2692 0.48 +2.6 2,882,082 - Psest_2692 0.48 +1.7 2,882,246 + Psest_2692 0.65 +1.7 2,882,246 + Psest_2692 0.65 +0.5 2,882,246 + Psest_2692 0.65 +0.4 2,882,393 + Psest_2692 0.81 +1.6 2,882,393 + Psest_2692 0.81 +0.0 2,882,566 + +0.4 2,882,567 - -1.6 2,882,593 + +0.4 2,882,593 + -1.6 2,882,593 + -1.0 2,882,593 + -2.3 2,882,593 + +1.5 2,882,593 + +0.5 2,882,594 - +0.5 2,882,594 - +0.2 2,882,594 - -1.1 2,882,779 + Psest_2693 0.46 -0.5 2,882,779 + Psest_2693 0.46 -0.4 2,882,780 - Psest_2693 0.46 -2.0 2,882,780 - Psest_2693 0.46 +0.4 2,882,780 - Psest_2693 0.46 -1.5 2,882,780 - Psest_2693 0.46 -2.6 2,882,922 + -2.9 2,882,954 - -1.2 2,883,019 - -1.2 2,884,073 + +1.2 2,884,089 - +0.3 2,884,089 - +0.6 2,884,347 + Psest_2695 0.18 -0.5 2,884,347 + Psest_2695 0.18 -0.1 2,884,369 - Psest_2695 0.19 +0.5 2,884,369 - Psest_2695 0.19 +0.2 2,884,422 + Psest_2695 0.23 -1.5 2,884,423 - Psest_2695 0.23 -0.7 2,884,423 - Psest_2695 0.23 -1.8 2,884,423 - Psest_2695 0.23 -0.5 2,884,872 + Psest_2695 0.57 +2.9 2,884,873 - Psest_2695 0.57 +0.8 2,884,953 + Psest_2695 0.63 -1.1 2,884,953 + Psest_2695 0.63 +2.8 2,884,953 + Psest_2695 0.63 -0.0 2,884,953 + Psest_2695 0.63 -0.8 2,884,953 + Psest_2695 0.63 -2.5 2,884,953 + Psest_2695 0.63 -2.3 2,884,953 + Psest_2695 0.63 +0.2 2,884,953 + Psest_2695 0.63 +1.1 2,884,953 + Psest_2695 0.63 -0.6 2,884,953 + Psest_2695 0.63 -3.0 2,884,953 + Psest_2695 0.63 -0.3 2,884,953 + Psest_2695 0.63 -0.8 2,884,953 + Psest_2695 0.63 +0.3 2,884,954 - Psest_2695 0.63 -1.2 2,884,954 - Psest_2695 0.63 +1.2 2,884,954 - Psest_2695 0.63 +0.7 2,884,954 - Psest_2695 0.63 -0.2 2,884,954 - Psest_2695 0.63 +0.3 2,884,954 - Psest_2695 0.63 -0.2 2,884,954 - Psest_2695 0.63 +0.7 2,884,954 - Psest_2695 0.63 +3.6 2,884,954 - Psest_2695 0.63 -0.7 2,884,954 - Psest_2695 0.63 +1.5 2,884,954 - Psest_2695 0.63 -1.9 2,884,954 - Psest_2695 0.63 +0.1 2,884,954 - Psest_2695 0.63 +1.3 2,884,954 - Psest_2695 0.63 +0.2 2,884,954 - Psest_2695 0.63 -0.3 2,884,954 - Psest_2695 0.63 -3.2 2,884,957 + Psest_2695 0.63 -1.8 2,884,957 + Psest_2695 0.63 -2.8 2,884,957 + Psest_2695 0.63 +0.1 2,884,957 + Psest_2695 0.63 -0.6 2,884,958 - Psest_2695 0.63 +3.4 2,884,958 - Psest_2695 0.63 +2.1 2,884,958 - Psest_2695 0.63 +2.1 2,884,958 - Psest_2695 0.63 -0.4 2,884,961 + Psest_2695 0.63 -1.5 2,884,962 - Psest_2695 0.63 +0.3 2,884,962 - Psest_2695 0.63 +1.3 2,884,962 - Psest_2695 0.63 -2.4 2,885,016 - Psest_2695 0.67 -0.4
Or see this region's nucleotide sequence