Experiment: Furfuryl Alcohol 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2057 and Psest_2058 are separated by 47 nucleotides Psest_2058 and Psest_2059 are separated by 5 nucleotides Psest_2059 and Psest_2060 are separated by 278 nucleotides
Psest_2057: Psest_2057 - Predicted secreted protein, at 2,181,749 to 2,182,495
_2057
Psest_2058: Psest_2058 - Zn-dependent hydrolases, including glyoxylases, at 2,182,543 to 2,183,472
_2058
Psest_2059: Psest_2059 - ABC-type branched-chain amino acid transport systems, periplasmic component, at 2,183,478 to 2,184,716
_2059
Psest_2060: Psest_2060 - PQQ-dependent dehydrogenase, methanol/ethanol family, at 2,184,995 to 2,186,773
_2060
Position (kb)
2183
2184
2185 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2182.517 kb on + strand at 2182.518 kb on - strand at 2182.575 kb on + strand at 2182.575 kb on + strand at 2182.575 kb on + strand at 2182.575 kb on + strand at 2182.576 kb on - strand at 2182.606 kb on + strand at 2182.606 kb on + strand at 2182.607 kb on - strand at 2182.607 kb on - strand at 2182.702 kb on - strand, within Psest_2058 at 2182.763 kb on - strand, within Psest_2058 at 2182.850 kb on + strand, within Psest_2058 at 2182.948 kb on + strand, within Psest_2058 at 2182.948 kb on + strand, within Psest_2058 at 2182.948 kb on + strand, within Psest_2058 at 2182.948 kb on + strand, within Psest_2058 at 2182.948 kb on + strand, within Psest_2058 at 2182.949 kb on - strand, within Psest_2058 at 2182.949 kb on - strand, within Psest_2058 at 2182.949 kb on - strand, within Psest_2058 at 2182.949 kb on - strand, within Psest_2058 at 2182.949 kb on - strand, within Psest_2058 at 2182.949 kb on - strand, within Psest_2058 at 2182.949 kb on - strand, within Psest_2058 at 2182.949 kb on - strand, within Psest_2058 at 2183.284 kb on + strand, within Psest_2058 at 2183.572 kb on + strand at 2183.572 kb on + strand at 2183.572 kb on + strand at 2183.572 kb on + strand at 2183.572 kb on + strand at 2183.572 kb on + strand at 2183.572 kb on + strand at 2183.572 kb on + strand at 2183.572 kb on + strand at 2183.629 kb on + strand, within Psest_2059 at 2183.629 kb on + strand, within Psest_2059 at 2183.629 kb on + strand, within Psest_2059 at 2183.629 kb on + strand, within Psest_2059 at 2183.629 kb on + strand, within Psest_2059 at 2183.629 kb on + strand, within Psest_2059 at 2183.630 kb on - strand, within Psest_2059 at 2183.630 kb on - strand, within Psest_2059 at 2183.630 kb on - strand, within Psest_2059 at 2183.782 kb on + strand, within Psest_2059 at 2183.783 kb on - strand, within Psest_2059 at 2183.798 kb on + strand, within Psest_2059 at 2183.908 kb on - strand, within Psest_2059 at 2183.908 kb on - strand, within Psest_2059 at 2184.097 kb on + strand, within Psest_2059 at 2184.098 kb on - strand, within Psest_2059 at 2184.137 kb on - strand, within Psest_2059 at 2184.223 kb on + strand, within Psest_2059 at 2184.224 kb on - strand, within Psest_2059 at 2184.367 kb on + strand, within Psest_2059 at 2184.368 kb on - strand, within Psest_2059 at 2184.610 kb on + strand at 2184.610 kb on + strand at 2184.610 kb on + strand at 2184.610 kb on + strand at 2184.611 kb on - strand at 2184.611 kb on - strand at 2184.611 kb on - strand at 2184.611 kb on - strand at 2184.611 kb on - strand at 2184.629 kb on - strand at 2184.678 kb on - strand at 2184.777 kb on + strand at 2184.777 kb on + strand at 2184.777 kb on + strand at 2184.868 kb on + strand at 2184.868 kb on + strand at 2184.886 kb on - strand at 2184.967 kb on + strand at 2184.967 kb on + strand at 2184.968 kb on - strand at 2185.286 kb on + strand, within Psest_2060 at 2185.286 kb on + strand, within Psest_2060 at 2185.286 kb on + strand, within Psest_2060 at 2185.286 kb on + strand, within Psest_2060 at 2185.287 kb on - strand, within Psest_2060 at 2185.287 kb on - strand, within Psest_2060 at 2185.352 kb on + strand, within Psest_2060 at 2185.352 kb on + strand, within Psest_2060 at 2185.418 kb on + strand, within Psest_2060 at 2185.419 kb on - strand, within Psest_2060 at 2185.515 kb on - strand, within Psest_2060 at 2185.515 kb on - strand, within Psest_2060 at 2185.619 kb on + strand, within Psest_2060 at 2185.619 kb on + strand, within Psest_2060 at 2185.619 kb on + strand, within Psest_2060 at 2185.679 kb on + strand, within Psest_2060
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.05 vol% remove 2,182,517 + +0.0 2,182,518 - +1.6 2,182,575 + -0.8 2,182,575 + +2.0 2,182,575 + -2.7 2,182,575 + +0.3 2,182,576 - -0.9 2,182,606 + -0.5 2,182,606 + +0.6 2,182,607 - +2.5 2,182,607 - +2.4 2,182,702 - Psest_2058 0.17 +0.1 2,182,763 - Psest_2058 0.24 +0.5 2,182,850 + Psest_2058 0.33 -1.9 2,182,948 + Psest_2058 0.44 -0.3 2,182,948 + Psest_2058 0.44 -1.7 2,182,948 + Psest_2058 0.44 -1.1 2,182,948 + Psest_2058 0.44 +2.3 2,182,948 + Psest_2058 0.44 +0.1 2,182,949 - Psest_2058 0.44 +0.7 2,182,949 - Psest_2058 0.44 -2.0 2,182,949 - Psest_2058 0.44 +0.7 2,182,949 - Psest_2058 0.44 +0.7 2,182,949 - Psest_2058 0.44 -1.1 2,182,949 - Psest_2058 0.44 +3.0 2,182,949 - Psest_2058 0.44 -1.0 2,182,949 - Psest_2058 0.44 +3.2 2,183,284 + Psest_2058 0.80 -3.0 2,183,572 + -0.8 2,183,572 + -1.3 2,183,572 + -0.7 2,183,572 + -1.4 2,183,572 + +1.0 2,183,572 + +1.4 2,183,572 + -0.2 2,183,572 + -0.2 2,183,572 + +1.1 2,183,629 + Psest_2059 0.12 -2.0 2,183,629 + Psest_2059 0.12 +1.6 2,183,629 + Psest_2059 0.12 -1.4 2,183,629 + Psest_2059 0.12 -1.0 2,183,629 + Psest_2059 0.12 +1.3 2,183,629 + Psest_2059 0.12 -2.9 2,183,630 - Psest_2059 0.12 +0.7 2,183,630 - Psest_2059 0.12 -0.2 2,183,630 - Psest_2059 0.12 +1.7 2,183,782 + Psest_2059 0.25 -0.9 2,183,783 - Psest_2059 0.25 -1.0 2,183,798 + Psest_2059 0.26 +0.9 2,183,908 - Psest_2059 0.35 +2.4 2,183,908 - Psest_2059 0.35 -0.3 2,184,097 + Psest_2059 0.50 +1.4 2,184,098 - Psest_2059 0.50 -0.8 2,184,137 - Psest_2059 0.53 -2.5 2,184,223 + Psest_2059 0.60 +0.1 2,184,224 - Psest_2059 0.60 +0.1 2,184,367 + Psest_2059 0.72 -0.3 2,184,368 - Psest_2059 0.72 -1.0 2,184,610 + -2.6 2,184,610 + -0.1 2,184,610 + -2.6 2,184,610 + +1.1 2,184,611 - -0.3 2,184,611 - +0.0 2,184,611 - -3.2 2,184,611 - +1.1 2,184,611 - -0.9 2,184,629 - +0.6 2,184,678 - +1.1 2,184,777 + +0.7 2,184,777 + -0.8 2,184,777 + +1.6 2,184,868 + +0.1 2,184,868 + -0.5 2,184,886 - -0.4 2,184,967 + -0.7 2,184,967 + +0.1 2,184,968 - -1.9 2,185,286 + Psest_2060 0.16 +0.7 2,185,286 + Psest_2060 0.16 -1.3 2,185,286 + Psest_2060 0.16 +2.9 2,185,286 + Psest_2060 0.16 +1.6 2,185,287 - Psest_2060 0.16 +0.8 2,185,287 - Psest_2060 0.16 -2.2 2,185,352 + Psest_2060 0.20 +0.7 2,185,352 + Psest_2060 0.20 +3.7 2,185,418 + Psest_2060 0.24 -1.5 2,185,419 - Psest_2060 0.24 -0.0 2,185,515 - Psest_2060 0.29 +2.3 2,185,515 - Psest_2060 0.29 +1.1 2,185,619 + Psest_2060 0.35 +1.3 2,185,619 + Psest_2060 0.35 +0.1 2,185,619 + Psest_2060 0.35 -1.0 2,185,679 + Psest_2060 0.38 -2.1
Or see this region's nucleotide sequence