Experiment: Furfuryl Alcohol 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1988 and Psest_1989 are separated by 93 nucleotides Psest_1989 and Psest_1990 are separated by 74 nucleotides Psest_1990 and Psest_1991 are separated by 46 nucleotides Psest_1991 and Psest_1992 are separated by 46 nucleotides
Psest_1988: Psest_1988 - ribosomal protein S1, at 2,105,689 to 2,107,371
_1988
Psest_1989: Psest_1989 - Transcriptional regulators, at 2,107,465 to 2,107,908
_1989
Psest_1990: Psest_1990 - Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs, at 2,107,983 to 2,109,155
_1990
Psest_1991: Psest_1991 - Glutathione S-transferase, at 2,109,202 to 2,109,804
_1991
Psest_1992: Psest_1992 - GTP cyclohydrolase I, at 2,109,851 to 2,110,396
_1992
Position (kb)
2107
2108
2109
2110 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2107.555 kb on + strand, within Psest_1989 at 2107.624 kb on - strand, within Psest_1989 at 2107.624 kb on - strand, within Psest_1989 at 2107.624 kb on - strand, within Psest_1989 at 2107.624 kb on - strand, within Psest_1989 at 2107.629 kb on + strand, within Psest_1989 at 2107.630 kb on - strand, within Psest_1989 at 2107.650 kb on + strand, within Psest_1989 at 2107.651 kb on - strand, within Psest_1989 at 2107.724 kb on + strand, within Psest_1989 at 2107.724 kb on + strand, within Psest_1989 at 2107.728 kb on + strand, within Psest_1989 at 2107.728 kb on + strand, within Psest_1989 at 2107.729 kb on - strand, within Psest_1989 at 2107.729 kb on - strand, within Psest_1989 at 2107.871 kb on - strand at 2107.958 kb on + strand at 2108.152 kb on - strand, within Psest_1990 at 2108.331 kb on + strand, within Psest_1990 at 2108.584 kb on + strand, within Psest_1990 at 2108.643 kb on + strand, within Psest_1990 at 2108.644 kb on - strand, within Psest_1990 at 2109.215 kb on - strand at 2109.215 kb on - strand at 2109.223 kb on + strand at 2109.241 kb on + strand at 2109.241 kb on + strand at 2109.241 kb on + strand at 2109.242 kb on - strand at 2109.280 kb on + strand, within Psest_1991 at 2109.281 kb on - strand, within Psest_1991 at 2109.418 kb on + strand, within Psest_1991 at 2109.418 kb on + strand, within Psest_1991 at 2109.419 kb on - strand, within Psest_1991 at 2109.419 kb on - strand, within Psest_1991 at 2109.419 kb on - strand, within Psest_1991 at 2109.544 kb on + strand, within Psest_1991 at 2109.552 kb on + strand, within Psest_1991 at 2109.577 kb on + strand, within Psest_1991 at 2109.577 kb on + strand, within Psest_1991 at 2109.646 kb on + strand, within Psest_1991 at 2109.646 kb on + strand, within Psest_1991 at 2109.647 kb on - strand, within Psest_1991 at 2109.664 kb on + strand, within Psest_1991 at 2109.665 kb on - strand, within Psest_1991 at 2109.686 kb on + strand, within Psest_1991 at 2109.686 kb on + strand, within Psest_1991 at 2109.686 kb on + strand, within Psest_1991 at 2109.686 kb on + strand, within Psest_1991 at 2109.687 kb on - strand, within Psest_1991 at 2109.687 kb on - strand, within Psest_1991 at 2109.688 kb on + strand, within Psest_1991 at 2109.688 kb on + strand, within Psest_1991 at 2109.688 kb on + strand, within Psest_1991 at 2109.688 kb on + strand, within Psest_1991 at 2109.688 kb on + strand, within Psest_1991 at 2109.688 kb on + strand, within Psest_1991 at 2109.688 kb on + strand, within Psest_1991 at 2109.688 kb on + strand, within Psest_1991 at 2109.689 kb on - strand, within Psest_1991 at 2109.689 kb on - strand, within Psest_1991 at 2109.689 kb on - strand, within Psest_1991 at 2109.694 kb on + strand, within Psest_1991 at 2109.694 kb on + strand, within Psest_1991 at 2109.694 kb on + strand, within Psest_1991 at 2109.695 kb on - strand, within Psest_1991 at 2109.695 kb on - strand, within Psest_1991 at 2109.695 kb on - strand, within Psest_1991 at 2109.793 kb on - strand at 2109.796 kb on + strand at 2109.797 kb on - strand at 2109.797 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.05 vol% remove 2,107,555 + Psest_1989 0.20 +2.3 2,107,624 - Psest_1989 0.36 +0.1 2,107,624 - Psest_1989 0.36 -0.9 2,107,624 - Psest_1989 0.36 +0.2 2,107,624 - Psest_1989 0.36 -0.7 2,107,629 + Psest_1989 0.37 +2.0 2,107,630 - Psest_1989 0.37 -0.5 2,107,650 + Psest_1989 0.42 +1.3 2,107,651 - Psest_1989 0.42 +0.3 2,107,724 + Psest_1989 0.58 -0.1 2,107,724 + Psest_1989 0.58 -0.7 2,107,728 + Psest_1989 0.59 +2.4 2,107,728 + Psest_1989 0.59 +0.7 2,107,729 - Psest_1989 0.59 +0.3 2,107,729 - Psest_1989 0.59 +1.3 2,107,871 - -1.4 2,107,958 + +2.8 2,108,152 - Psest_1990 0.14 +1.3 2,108,331 + Psest_1990 0.30 -2.3 2,108,584 + Psest_1990 0.51 +3.0 2,108,643 + Psest_1990 0.56 +1.4 2,108,644 - Psest_1990 0.56 -2.0 2,109,215 - +0.7 2,109,215 - -1.1 2,109,223 + +1.0 2,109,241 + -1.8 2,109,241 + -0.7 2,109,241 + -1.7 2,109,242 - +1.2 2,109,280 + Psest_1991 0.13 -0.5 2,109,281 - Psest_1991 0.13 -0.1 2,109,418 + Psest_1991 0.36 -1.2 2,109,418 + Psest_1991 0.36 -2.0 2,109,419 - Psest_1991 0.36 -0.0 2,109,419 - Psest_1991 0.36 +0.5 2,109,419 - Psest_1991 0.36 -1.3 2,109,544 + Psest_1991 0.57 -2.7 2,109,552 + Psest_1991 0.58 +1.6 2,109,577 + Psest_1991 0.62 +2.7 2,109,577 + Psest_1991 0.62 -2.0 2,109,646 + Psest_1991 0.74 -3.5 2,109,646 + Psest_1991 0.74 +0.5 2,109,647 - Psest_1991 0.74 -0.3 2,109,664 + Psest_1991 0.77 -0.7 2,109,665 - Psest_1991 0.77 +2.0 2,109,686 + Psest_1991 0.80 -0.5 2,109,686 + Psest_1991 0.80 -2.8 2,109,686 + Psest_1991 0.80 -3.0 2,109,686 + Psest_1991 0.80 +2.4 2,109,687 - Psest_1991 0.80 +1.1 2,109,687 - Psest_1991 0.80 -3.7 2,109,688 + Psest_1991 0.81 -1.7 2,109,688 + Psest_1991 0.81 +0.2 2,109,688 + Psest_1991 0.81 +1.3 2,109,688 + Psest_1991 0.81 +2.1 2,109,688 + Psest_1991 0.81 -1.0 2,109,688 + Psest_1991 0.81 +1.6 2,109,688 + Psest_1991 0.81 +0.4 2,109,688 + Psest_1991 0.81 -0.7 2,109,689 - Psest_1991 0.81 +1.2 2,109,689 - Psest_1991 0.81 +0.0 2,109,689 - Psest_1991 0.81 -3.1 2,109,694 + Psest_1991 0.82 +0.2 2,109,694 + Psest_1991 0.82 +0.4 2,109,694 + Psest_1991 0.82 -2.8 2,109,695 - Psest_1991 0.82 +0.3 2,109,695 - Psest_1991 0.82 -1.3 2,109,695 - Psest_1991 0.82 -4.3 2,109,793 - +0.3 2,109,796 + -1.4 2,109,797 - -1.3 2,109,797 - -0.9
Or see this region's nucleotide sequence