Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1989
Experiment: Furfuryl Alcohol 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Furfuryl Alcohol 0.05 vol% |
---|---|---|---|---|---|
remove | |||||
2,107,555 | + | Psest_1989 | 0.20 | +2.3 | |
2,107,624 | - | Psest_1989 | 0.36 | +0.1 | |
2,107,624 | - | Psest_1989 | 0.36 | -0.9 | |
2,107,624 | - | Psest_1989 | 0.36 | +0.2 | |
2,107,624 | - | Psest_1989 | 0.36 | -0.7 | |
2,107,629 | + | Psest_1989 | 0.37 | +2.0 | |
2,107,630 | - | Psest_1989 | 0.37 | -0.5 | |
2,107,650 | + | Psest_1989 | 0.42 | +1.3 | |
2,107,651 | - | Psest_1989 | 0.42 | +0.3 | |
2,107,724 | + | Psest_1989 | 0.58 | -0.1 | |
2,107,724 | + | Psest_1989 | 0.58 | -0.7 | |
2,107,728 | + | Psest_1989 | 0.59 | +2.4 | |
2,107,728 | + | Psest_1989 | 0.59 | +0.7 | |
2,107,729 | - | Psest_1989 | 0.59 | +0.3 | |
2,107,729 | - | Psest_1989 | 0.59 | +1.3 | |
2,107,871 | - | -1.4 | |||
2,107,958 | + | +2.8 | |||
2,108,152 | - | Psest_1990 | 0.14 | +1.3 | |
2,108,331 | + | Psest_1990 | 0.30 | -2.3 | |
2,108,584 | + | Psest_1990 | 0.51 | +3.0 | |
2,108,643 | + | Psest_1990 | 0.56 | +1.4 | |
2,108,644 | - | Psest_1990 | 0.56 | -2.0 |
Or see this region's nucleotide sequence