Experiment: Furfuryl Alcohol 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1772 and Psest_1773 are separated by 190 nucleotides Psest_1773 and Psest_1774 are separated by 28 nucleotides Psest_1774 and Psest_1775 are separated by 85 nucleotides
Psest_1772: Psest_1772 - Aspartate/tyrosine/aromatic aminotransferase, at 1,872,940 to 1,874,151
_1772
Psest_1773: Psest_1773 - methionine-R-sulfoxide reductase, at 1,874,342 to 1,874,740
_1773
Psest_1774: Psest_1774 - Glutathione peroxidase, at 1,874,769 to 1,875,251
_1774
Psest_1775: Psest_1775 - Predicted ATPase (AAA+ superfamily), at 1,875,337 to 1,876,227
_1775
Position (kb)
1874
1875
1876 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 1873.859 kb on + strand, within Psest_1772 at 1873.859 kb on + strand, within Psest_1772 at 1873.859 kb on + strand, within Psest_1772 at 1873.860 kb on - strand, within Psest_1772 at 1873.860 kb on - strand, within Psest_1772 at 1873.860 kb on - strand, within Psest_1772 at 1873.860 kb on - strand, within Psest_1772 at 1873.860 kb on - strand, within Psest_1772 at 1873.860 kb on - strand, within Psest_1772 at 1873.904 kb on + strand, within Psest_1772 at 1873.904 kb on + strand, within Psest_1772 at 1874.111 kb on + strand at 1874.279 kb on + strand at 1874.279 kb on + strand at 1874.279 kb on + strand at 1874.279 kb on + strand at 1874.280 kb on - strand at 1874.280 kb on - strand at 1874.307 kb on - strand at 1874.337 kb on + strand at 1874.338 kb on - strand at 1874.338 kb on - strand at 1874.338 kb on - strand at 1874.447 kb on + strand, within Psest_1773 at 1874.447 kb on + strand, within Psest_1773 at 1874.447 kb on + strand, within Psest_1773 at 1874.448 kb on - strand, within Psest_1773 at 1874.448 kb on - strand, within Psest_1773 at 1874.448 kb on - strand, within Psest_1773 at 1874.549 kb on + strand, within Psest_1773 at 1874.550 kb on - strand, within Psest_1773 at 1874.550 kb on - strand, within Psest_1773 at 1874.895 kb on + strand, within Psest_1774 at 1874.896 kb on - strand, within Psest_1774 at 1875.195 kb on + strand, within Psest_1774 at 1875.289 kb on + strand at 1875.331 kb on + strand at 1875.664 kb on + strand, within Psest_1775 at 1875.665 kb on - strand, within Psest_1775 at 1875.665 kb on - strand, within Psest_1775 at 1875.740 kb on + strand, within Psest_1775 at 1875.740 kb on + strand, within Psest_1775 at 1875.740 kb on + strand, within Psest_1775 at 1875.741 kb on - strand, within Psest_1775 at 1875.741 kb on - strand, within Psest_1775 at 1875.872 kb on - strand, within Psest_1775 at 1876.039 kb on + strand, within Psest_1775
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.05 vol% remove 1,873,859 + Psest_1772 0.76 +0.7 1,873,859 + Psest_1772 0.76 +0.7 1,873,859 + Psest_1772 0.76 -2.4 1,873,860 - Psest_1772 0.76 -0.8 1,873,860 - Psest_1772 0.76 -0.6 1,873,860 - Psest_1772 0.76 -1.5 1,873,860 - Psest_1772 0.76 +0.8 1,873,860 - Psest_1772 0.76 +1.1 1,873,860 - Psest_1772 0.76 -0.3 1,873,904 + Psest_1772 0.80 -2.1 1,873,904 + Psest_1772 0.80 +0.3 1,874,111 + -1.5 1,874,279 + -0.0 1,874,279 + -1.0 1,874,279 + +0.1 1,874,279 + -1.8 1,874,280 - +0.1 1,874,280 - -0.2 1,874,307 - -2.1 1,874,337 + +0.1 1,874,338 - +0.8 1,874,338 - -4.3 1,874,338 - -0.0 1,874,447 + Psest_1773 0.26 -0.8 1,874,447 + Psest_1773 0.26 -0.9 1,874,447 + Psest_1773 0.26 +0.7 1,874,448 - Psest_1773 0.27 -1.7 1,874,448 - Psest_1773 0.27 +0.2 1,874,448 - Psest_1773 0.27 -0.5 1,874,549 + Psest_1773 0.52 -0.3 1,874,550 - Psest_1773 0.52 +0.2 1,874,550 - Psest_1773 0.52 +2.6 1,874,895 + Psest_1774 0.26 +0.0 1,874,896 - Psest_1774 0.26 -0.6 1,875,195 + Psest_1774 0.88 -1.5 1,875,289 + -0.3 1,875,331 + -1.7 1,875,664 + Psest_1775 0.37 +1.3 1,875,665 - Psest_1775 0.37 -3.2 1,875,665 - Psest_1775 0.37 -1.7 1,875,740 + Psest_1775 0.45 +1.0 1,875,740 + Psest_1775 0.45 +0.3 1,875,740 + Psest_1775 0.45 +1.0 1,875,741 - Psest_1775 0.45 -3.0 1,875,741 - Psest_1775 0.45 -1.2 1,875,872 - Psest_1775 0.60 +1.3 1,876,039 + Psest_1775 0.79 +0.3
Or see this region's nucleotide sequence