Experiment: Furfuryl Alcohol 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1638 and Psest_1639 are separated by 83 nucleotides Psest_1639 and Psest_1640 are separated by 105 nucleotides
Psest_1638: Psest_1638 - cysteine synthase B, at 1,740,871 to 1,741,773
_1638
Psest_1639: Psest_1639 - 23S rRNA (uracil-5-)-methyltransferase RumA, at 1,741,857 to 1,743,209
_1639
Psest_1640: Psest_1640 - (p)ppGpp synthetase, RelA/SpoT family, at 1,743,315 to 1,745,558
_1640
Position (kb)
1741
1742
1743
1744 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1741.756 kb on + strand at 1741.757 kb on - strand at 1741.757 kb on - strand at 1741.944 kb on - strand at 1741.944 kb on - strand at 1742.061 kb on - strand, within Psest_1639 at 1742.405 kb on - strand, within Psest_1639 at 1742.482 kb on + strand, within Psest_1639 at 1742.482 kb on + strand, within Psest_1639 at 1742.482 kb on + strand, within Psest_1639 at 1742.482 kb on + strand, within Psest_1639 at 1743.066 kb on + strand, within Psest_1639 at 1743.066 kb on + strand, within Psest_1639 at 1743.066 kb on + strand, within Psest_1639 at 1743.067 kb on - strand, within Psest_1639 at 1743.067 kb on - strand, within Psest_1639 at 1743.067 kb on - strand, within Psest_1639 at 1743.067 kb on - strand, within Psest_1639 at 1743.067 kb on - strand, within Psest_1639 at 1743.067 kb on - strand, within Psest_1639 at 1743.067 kb on - strand, within Psest_1639 at 1743.155 kb on + strand at 1743.156 kb on - strand at 1743.312 kb on + strand at 1743.312 kb on + strand at 1743.312 kb on + strand at 1743.313 kb on - strand at 1743.320 kb on - strand at 1743.320 kb on - strand at 1743.359 kb on + strand at 1743.360 kb on - strand at 1743.927 kb on - strand, within Psest_1640 at 1743.978 kb on + strand, within Psest_1640 at 1743.978 kb on + strand, within Psest_1640 at 1743.979 kb on - strand, within Psest_1640 at 1743.979 kb on - strand, within Psest_1640 at 1743.979 kb on - strand, within Psest_1640 at 1744.029 kb on + strand, within Psest_1640 at 1744.029 kb on + strand, within Psest_1640 at 1744.029 kb on + strand, within Psest_1640 at 1744.029 kb on + strand, within Psest_1640 at 1744.029 kb on + strand, within Psest_1640 at 1744.029 kb on + strand, within Psest_1640 at 1744.029 kb on + strand, within Psest_1640 at 1744.029 kb on + strand, within Psest_1640 at 1744.030 kb on - strand, within Psest_1640 at 1744.030 kb on - strand, within Psest_1640 at 1744.030 kb on - strand, within Psest_1640 at 1744.030 kb on - strand, within Psest_1640 at 1744.030 kb on - strand, within Psest_1640 at 1744.030 kb on - strand, within Psest_1640 at 1744.030 kb on - strand, within Psest_1640 at 1744.116 kb on + strand, within Psest_1640 at 1744.117 kb on - strand, within Psest_1640 at 1744.167 kb on + strand, within Psest_1640 at 1744.168 kb on - strand, within Psest_1640 at 1744.168 kb on - strand, within Psest_1640
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.05 vol% remove 1,741,756 + +0.2 1,741,757 - +2.7 1,741,757 - -0.5 1,741,944 - +2.5 1,741,944 - +1.3 1,742,061 - Psest_1639 0.15 +2.2 1,742,405 - Psest_1639 0.41 +2.5 1,742,482 + Psest_1639 0.46 -2.2 1,742,482 + Psest_1639 0.46 -1.0 1,742,482 + Psest_1639 0.46 -1.5 1,742,482 + Psest_1639 0.46 -3.0 1,743,066 + Psest_1639 0.89 -0.5 1,743,066 + Psest_1639 0.89 -2.5 1,743,066 + Psest_1639 0.89 -3.7 1,743,067 - Psest_1639 0.89 +3.5 1,743,067 - Psest_1639 0.89 +3.2 1,743,067 - Psest_1639 0.89 -0.7 1,743,067 - Psest_1639 0.89 +1.3 1,743,067 - Psest_1639 0.89 +3.9 1,743,067 - Psest_1639 0.89 +2.8 1,743,067 - Psest_1639 0.89 +1.8 1,743,155 + +0.3 1,743,156 - +0.8 1,743,312 + +2.3 1,743,312 + +2.4 1,743,312 + +2.7 1,743,313 - +1.3 1,743,320 - +2.5 1,743,320 - +1.0 1,743,359 + +0.0 1,743,360 - +1.5 1,743,927 - Psest_1640 0.27 +2.2 1,743,978 + Psest_1640 0.30 +1.5 1,743,978 + Psest_1640 0.30 +2.0 1,743,979 - Psest_1640 0.30 +1.0 1,743,979 - Psest_1640 0.30 +1.7 1,743,979 - Psest_1640 0.30 +1.1 1,744,029 + Psest_1640 0.32 +0.4 1,744,029 + Psest_1640 0.32 +2.1 1,744,029 + Psest_1640 0.32 +1.5 1,744,029 + Psest_1640 0.32 +0.6 1,744,029 + Psest_1640 0.32 -1.0 1,744,029 + Psest_1640 0.32 +2.3 1,744,029 + Psest_1640 0.32 +0.3 1,744,029 + Psest_1640 0.32 +0.4 1,744,030 - Psest_1640 0.32 +0.8 1,744,030 - Psest_1640 0.32 +1.3 1,744,030 - Psest_1640 0.32 +0.3 1,744,030 - Psest_1640 0.32 +1.3 1,744,030 - Psest_1640 0.32 +0.3 1,744,030 - Psest_1640 0.32 +1.0 1,744,030 - Psest_1640 0.32 +0.0 1,744,116 + Psest_1640 0.36 +3.0 1,744,117 - Psest_1640 0.36 +0.8 1,744,167 + Psest_1640 0.38 +1.3 1,744,168 - Psest_1640 0.38 +1.3 1,744,168 - Psest_1640 0.38 +0.5
Or see this region's nucleotide sequence