Experiment: Furfuryl Alcohol 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1435 and Psest_1436 are separated by 3 nucleotides Psest_1436 and Psest_1437 are separated by 135 nucleotides Psest_1437 and Psest_1438 are separated by 56 nucleotides
Psest_1435: Psest_1435 - Predicted SAM-dependent methyltransferases, at 1,546,351 to 1,547,289
_1435
Psest_1436: Psest_1436 - Uncharacterized protein conserved in bacteria, at 1,547,293 to 1,547,745
_1436
Psest_1437: Psest_1437 - Uncharacterized protein conserved in archaea, at 1,547,881 to 1,548,399
_1437
Psest_1438: Psest_1438 - Transcriptional regulator, at 1,548,456 to 1,549,415
_1438
Position (kb)
1547
1548
1549 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 1547.008 kb on + strand, within Psest_1435 at 1547.009 kb on - strand, within Psest_1435 at 1547.581 kb on + strand, within Psest_1436 at 1547.581 kb on + strand, within Psest_1436 at 1547.582 kb on - strand, within Psest_1436 at 1547.627 kb on + strand, within Psest_1436 at 1547.627 kb on + strand, within Psest_1436 at 1547.628 kb on - strand, within Psest_1436 at 1547.628 kb on - strand, within Psest_1436 at 1547.628 kb on - strand, within Psest_1436 at 1547.678 kb on + strand, within Psest_1436 at 1547.745 kb on + strand at 1547.746 kb on - strand at 1547.746 kb on - strand at 1548.209 kb on + strand, within Psest_1437 at 1548.209 kb on + strand, within Psest_1437 at 1548.210 kb on - strand, within Psest_1437 at 1548.361 kb on + strand at 1548.361 kb on + strand at 1548.361 kb on + strand at 1548.361 kb on + strand at 1548.362 kb on - strand at 1548.362 kb on - strand at 1548.362 kb on - strand at 1548.362 kb on - strand at 1548.432 kb on + strand at 1548.432 kb on + strand at 1548.433 kb on - strand at 1548.433 kb on - strand at 1548.433 kb on - strand at 1548.565 kb on + strand, within Psest_1438 at 1548.566 kb on - strand, within Psest_1438 at 1548.566 kb on - strand, within Psest_1438 at 1548.583 kb on + strand, within Psest_1438 at 1548.583 kb on + strand, within Psest_1438 at 1548.583 kb on + strand, within Psest_1438 at 1548.583 kb on + strand, within Psest_1438 at 1548.584 kb on - strand, within Psest_1438 at 1548.584 kb on - strand, within Psest_1438 at 1548.584 kb on - strand, within Psest_1438 at 1548.641 kb on + strand, within Psest_1438 at 1549.144 kb on - strand, within Psest_1438 at 1549.144 kb on - strand, within Psest_1438 at 1549.376 kb on - strand at 1549.376 kb on - strand at 1549.376 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.05 vol% remove 1,547,008 + Psest_1435 0.70 -1.3 1,547,009 - Psest_1435 0.70 -1.5 1,547,581 + Psest_1436 0.64 +2.3 1,547,581 + Psest_1436 0.64 +0.3 1,547,582 - Psest_1436 0.64 +1.0 1,547,627 + Psest_1436 0.74 +4.1 1,547,627 + Psest_1436 0.74 +0.8 1,547,628 - Psest_1436 0.74 +2.6 1,547,628 - Psest_1436 0.74 -1.7 1,547,628 - Psest_1436 0.74 +4.5 1,547,678 + Psest_1436 0.85 +0.7 1,547,745 + -0.5 1,547,746 - +0.2 1,547,746 - +0.2 1,548,209 + Psest_1437 0.63 +0.9 1,548,209 + Psest_1437 0.63 +0.5 1,548,210 - Psest_1437 0.63 -0.1 1,548,361 + +1.3 1,548,361 + -2.4 1,548,361 + +0.3 1,548,361 + -0.8 1,548,362 - +0.7 1,548,362 - -1.1 1,548,362 - -0.1 1,548,362 - +1.3 1,548,432 + +0.5 1,548,432 + -0.8 1,548,433 - -0.0 1,548,433 - -0.3 1,548,433 - +3.6 1,548,565 + Psest_1438 0.11 -0.5 1,548,566 - Psest_1438 0.11 +0.1 1,548,566 - Psest_1438 0.11 +0.0 1,548,583 + Psest_1438 0.13 -0.2 1,548,583 + Psest_1438 0.13 -1.2 1,548,583 + Psest_1438 0.13 +0.8 1,548,583 + Psest_1438 0.13 -2.3 1,548,584 - Psest_1438 0.13 +0.7 1,548,584 - Psest_1438 0.13 +0.5 1,548,584 - Psest_1438 0.13 -0.2 1,548,641 + Psest_1438 0.19 -0.9 1,549,144 - Psest_1438 0.72 +0.7 1,549,144 - Psest_1438 0.72 +1.3 1,549,376 - +0.6 1,549,376 - +0.1 1,549,376 - +0.5
Or see this region's nucleotide sequence