Experiment: Furfuryl Alcohol 0.05 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1377 and Psest_1378 are separated by 12 nucleotides Psest_1378 and Psest_1379 are separated by 58 nucleotides Psest_1379 and Psest_1380 are separated by 214 nucleotides
Psest_1377: Psest_1377 - hypothetical protein, at 1,487,077 to 1,487,757
_1377
Psest_1378: Psest_1378 - hypothetical protein, at 1,487,770 to 1,488,501
_1378
Psest_1379: Psest_1379 - hypothetical protein, at 1,488,560 to 1,488,916
_1379
Psest_1380: Psest_1380 - Di- and tricarboxylate transporters, at 1,489,131 to 1,490,978
_1380
Position (kb)
1488
1489 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5
6
7
8 at 1487.634 kb on - strand, within Psest_1377 at 1487.753 kb on + strand at 1487.753 kb on + strand at 1487.753 kb on + strand at 1487.753 kb on + strand at 1487.753 kb on + strand at 1487.753 kb on + strand at 1487.753 kb on + strand at 1487.753 kb on + strand at 1487.753 kb on + strand at 1487.753 kb on + strand at 1487.754 kb on - strand at 1487.754 kb on - strand at 1487.754 kb on - strand at 1487.754 kb on - strand at 1487.754 kb on - strand at 1487.754 kb on - strand at 1487.754 kb on - strand at 1487.757 kb on + strand at 1487.758 kb on - strand at 1487.849 kb on + strand, within Psest_1378 at 1487.849 kb on + strand, within Psest_1378 at 1487.849 kb on + strand, within Psest_1378 at 1487.849 kb on + strand, within Psest_1378 at 1487.849 kb on + strand, within Psest_1378 at 1487.849 kb on + strand, within Psest_1378 at 1487.849 kb on + strand, within Psest_1378 at 1487.850 kb on - strand, within Psest_1378 at 1487.850 kb on - strand, within Psest_1378 at 1487.850 kb on - strand, within Psest_1378 at 1487.921 kb on - strand, within Psest_1378 at 1488.057 kb on + strand, within Psest_1378 at 1488.057 kb on + strand, within Psest_1378 at 1488.058 kb on - strand, within Psest_1378 at 1488.113 kb on + strand, within Psest_1378 at 1488.224 kb on + strand, within Psest_1378 at 1488.224 kb on + strand, within Psest_1378 at 1488.224 kb on + strand, within Psest_1378 at 1488.320 kb on + strand, within Psest_1378 at 1488.320 kb on + strand, within Psest_1378 at 1488.320 kb on + strand, within Psest_1378 at 1488.320 kb on + strand, within Psest_1378 at 1488.320 kb on + strand, within Psest_1378 at 1488.321 kb on - strand, within Psest_1378 at 1488.321 kb on - strand, within Psest_1378 at 1488.321 kb on - strand, within Psest_1378 at 1488.321 kb on - strand, within Psest_1378 at 1488.321 kb on - strand, within Psest_1378 at 1488.321 kb on - strand, within Psest_1378 at 1488.321 kb on - strand, within Psest_1378 at 1488.464 kb on + strand at 1488.464 kb on + strand at 1488.561 kb on + strand at 1488.562 kb on - strand at 1488.562 kb on - strand at 1488.708 kb on - strand, within Psest_1379 at 1489.080 kb on - strand at 1489.080 kb on - strand at 1489.082 kb on + strand at 1489.082 kb on + strand at 1489.082 kb on + strand at 1489.082 kb on + strand at 1489.083 kb on - strand at 1489.551 kb on + strand, within Psest_1380 at 1489.571 kb on + strand, within Psest_1380 at 1489.572 kb on - strand, within Psest_1380 at 1489.580 kb on - strand, within Psest_1380 at 1489.710 kb on + strand, within Psest_1380 at 1489.710 kb on + strand, within Psest_1380 at 1489.710 kb on + strand, within Psest_1380 at 1489.710 kb on + strand, within Psest_1380 at 1489.710 kb on + strand, within Psest_1380 at 1489.710 kb on + strand, within Psest_1380 at 1489.711 kb on - strand, within Psest_1380 at 1489.711 kb on - strand, within Psest_1380 at 1489.711 kb on - strand, within Psest_1380 at 1489.711 kb on - strand, within Psest_1380 at 1489.711 kb on - strand, within Psest_1380 at 1489.711 kb on - strand, within Psest_1380 at 1489.711 kb on - strand, within Psest_1380
Per-strain Table
Position Strand Gene LocusTag Fraction Furfuryl Alcohol 0.05 vol% remove 1,487,634 - Psest_1377 0.82 -0.1 1,487,753 + +1.9 1,487,753 + -0.7 1,487,753 + -1.1 1,487,753 + -1.2 1,487,753 + +0.2 1,487,753 + -0.8 1,487,753 + -0.8 1,487,753 + -0.1 1,487,753 + -0.6 1,487,753 + +1.9 1,487,754 - +0.5 1,487,754 - +0.3 1,487,754 - -0.1 1,487,754 - +1.4 1,487,754 - -0.7 1,487,754 - -0.5 1,487,754 - -1.5 1,487,757 + +0.5 1,487,758 - +0.7 1,487,849 + Psest_1378 0.11 +0.4 1,487,849 + Psest_1378 0.11 +1.5 1,487,849 + Psest_1378 0.11 +1.0 1,487,849 + Psest_1378 0.11 -1.2 1,487,849 + Psest_1378 0.11 +1.5 1,487,849 + Psest_1378 0.11 +0.5 1,487,849 + Psest_1378 0.11 +0.5 1,487,850 - Psest_1378 0.11 -0.1 1,487,850 - Psest_1378 0.11 +1.5 1,487,850 - Psest_1378 0.11 +2.5 1,487,921 - Psest_1378 0.21 +0.7 1,488,057 + Psest_1378 0.39 +1.4 1,488,057 + Psest_1378 0.39 +0.8 1,488,058 - Psest_1378 0.39 -0.3 1,488,113 + Psest_1378 0.47 -0.5 1,488,224 + Psest_1378 0.62 +8.0 1,488,224 + Psest_1378 0.62 +1.9 1,488,224 + Psest_1378 0.62 +1.5 1,488,320 + Psest_1378 0.75 +0.5 1,488,320 + Psest_1378 0.75 -0.3 1,488,320 + Psest_1378 0.75 +2.5 1,488,320 + Psest_1378 0.75 -1.5 1,488,320 + Psest_1378 0.75 +1.4 1,488,321 - Psest_1378 0.75 +0.4 1,488,321 - Psest_1378 0.75 -1.6 1,488,321 - Psest_1378 0.75 -0.5 1,488,321 - Psest_1378 0.75 -0.5 1,488,321 - Psest_1378 0.75 +0.8 1,488,321 - Psest_1378 0.75 +1.3 1,488,321 - Psest_1378 0.75 -1.3 1,488,464 + +1.9 1,488,464 + -0.8 1,488,561 + +3.1 1,488,562 - +0.0 1,488,562 - -0.6 1,488,708 - Psest_1379 0.41 +1.2 1,489,080 - +1.4 1,489,080 - -1.1 1,489,082 + +0.9 1,489,082 + -3.9 1,489,082 + -0.5 1,489,082 + -0.1 1,489,083 - +0.2 1,489,551 + Psest_1380 0.23 +1.5 1,489,571 + Psest_1380 0.24 -0.1 1,489,572 - Psest_1380 0.24 -1.1 1,489,580 - Psest_1380 0.24 +1.5 1,489,710 + Psest_1380 0.31 -0.1 1,489,710 + Psest_1380 0.31 -0.3 1,489,710 + Psest_1380 0.31 +0.5 1,489,710 + Psest_1380 0.31 -1.1 1,489,710 + Psest_1380 0.31 +1.1 1,489,710 + Psest_1380 0.31 +1.5 1,489,711 - Psest_1380 0.31 -0.1 1,489,711 - Psest_1380 0.31 -1.3 1,489,711 - Psest_1380 0.31 -0.6 1,489,711 - Psest_1380 0.31 -0.5 1,489,711 - Psest_1380 0.31 +1.9 1,489,711 - Psest_1380 0.31 +2.0 1,489,711 - Psest_1380 0.31 -1.6
Or see this region's nucleotide sequence